RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 RAB37Q96AX2 223 aa7.06□□□□□ -1.28
CTTN-208ENST00000498223 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
CTTN-208ENST00000498223 BCE1O60756 84 aa7.05□□□□□ -1.28
CTTN-208ENST00000498223 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
CTTN-208ENST00000498223 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
CTTN-208ENST00000498223 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
CTTN-208ENST00000498223 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
CTTN-208ENST00000498223 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
CTTN-208ENST00000498223 HINT1P49773 126 aaPredicted RBP7.04□□□□□ -1.28
CTTN-208ENST00000498223 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
CTTN-208ENST00000498223 RPL28P46779 137 aaKnown RBP7.03□□□□□ -1.28
CTTN-208ENST00000498223 FXYD2P54710 66 aa7.03□□□□□ -1.28
CTTN-208ENST00000498223 CTAG1AP78358 180 aa7.03□□□□□ -1.28
CTTN-208ENST00000498223 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
CTTN-208ENST00000498223 H7C2G1 150 aa7.02□□□□□ -1.29
CTTN-208ENST00000498223 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
CTTN-208ENST00000498223 PRLHP81277 87 aa7.02□□□□□ -1.29
CTTN-208ENST00000498223 DIRC1Q969H9 104 aa7.02□□□□□ -1.29
CTTN-208ENST00000498223 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
CTTN-208ENST00000498223 CFC1P0CG37 223 aa7.01□□□□□ -1.29
CTTN-208ENST00000498223 KRTAP10-4P60372 401 aaPredicted RBP7.01□□□□□ -1.29
CTTN-208ENST00000498223 Q1RN00 199 aa7.01□□□□□ -1.29
CTTN-208ENST00000498223 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
CTTN-208ENST00000498223 A0A0B4J2C4 111 aa7□□□□□ -1.29
CTTN-208ENST00000498223 M0R143 59 aa7□□□□□ -1.29
CTTN-208ENST00000498223 ZNF861PO60384 105 aa7□□□□□ -1.29
CTTN-208ENST00000498223 SPRR1AP35321 89 aa6.99□□□□□ -1.29
CTTN-208ENST00000498223 C6orf99Q4VX62 202 aa6.99□□□□□ -1.29
CTTN-208ENST00000498223 BVES-AS1Q5T3Y7 98 aa6.99□□□□□ -1.29
CTTN-208ENST00000498223 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
CTTN-208ENST00000498223 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
CTTN-208ENST00000498223 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
CTTN-208ENST00000498223 VAMP3Q15836 100 aa6.98□□□□□ -1.29
CTTN-208ENST00000498223 PRO1854Q9UHT4 67 aa6.98□□□□□ -1.29
CTTN-208ENST00000498223 B5MCH6 92 aa6.97□□□□□ -1.29
CTTN-208ENST00000498223 COX7BP24311 80 aa6.97□□□□□ -1.29
CTTN-208ENST00000498223 BATFQ16520 125 aa6.97□□□□□ -1.29
CTTN-208ENST00000498223 H0Y9J4 135 aa6.96□□□□□ -1.3
CTTN-208ENST00000498223 K7ERJ3 54 aa6.96□□□□□ -1.3
CTTN-208ENST00000498223 Q6ZRX8 168 aa6.96□□□□□ -1.3
CTTN-208ENST00000498223 A0A1B0GWB2 263 aa6.95□□□□□ -1.3
CTTN-208ENST00000498223 KRTAP4-16G5E9R7 235 aaPredicted RBP6.95□□□□□ -1.3
CTTN-208ENST00000498223 J3QL48 77 aa6.95□□□□□ -1.3
CTTN-208ENST00000498223 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
CTTN-208ENST00000498223 SMCR5Q8TEV8 140 aa6.95□□□□□ -1.3
CTTN-208ENST00000498223 TRBV7-6A0A0J9YX20 115 aa6.94□□□□□ -1.3
CTTN-208ENST00000498223 PCP4L1A6NKN8 68 aa6.94□□□□□ -1.3
CTTN-208ENST00000498223 PSMB2P49721 201 aa6.94□□□□□ -1.3
CTTN-208ENST00000498223 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
CTTN-208ENST00000498223 DHRS4-AS1Q9P1J3 65 aa6.93□□□□□ -1.3
CTTN-208ENST00000498223 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
CTTN-208ENST00000498223 SLC25A20O43772 301 aa6.92□□□□□ -1.3
CTTN-208ENST00000498223 Q9BRP9 147 aa6.92□□□□□ -1.3
CTTN-208ENST00000498223 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
CTTN-208ENST00000498223 SNCGO76070 127 aa6.9□□□□□ -1.3
CTTN-208ENST00000498223 TSPAN13O95857 204 aa6.9□□□□□ -1.3
CTTN-208ENST00000498223 COX6CP09669 75 aa6.9□□□□□ -1.3
CTTN-208ENST00000498223 ERC2-IT1O76042 136 aa6.89□□□□□ -1.31
CTTN-208ENST00000498223 H0YGX0 51 aa6.88□□□□□ -1.31
CTTN-208ENST00000498223 TRIAP1O43715 76 aa6.88□□□□□ -1.31
CTTN-208ENST00000498223 SCGB1C2P0DMR2 95 aa6.88□□□□□ -1.31
CTTN-208ENST00000498223 GAGE2AQ6NT46 116 aa6.88□□□□□ -1.31
CTTN-208ENST00000498223 hADV29S1A0JD25 119 aa6.87□□□□□ -1.31
CTTN-208ENST00000498223 LINC00575Q6W349 94 aa6.87□□□□□ -1.31
CTTN-208ENST00000498223 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
CTTN-208ENST00000498223 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
CTTN-208ENST00000498223 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
CTTN-208ENST00000498223 OXTP01178 125 aa6.86□□□□□ -1.31
CTTN-208ENST00000498223 ST20-AS1Q8NBB2 130 aa6.86□□□□□ -1.31
CTTN-208ENST00000498223 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
CTTN-208ENST00000498223 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
CTTN-208ENST00000498223 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.31
CTTN-208ENST00000498223 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
CTTN-208ENST00000498223 CRYGAP11844 174 aa6.84□□□□□ -1.31
CTTN-208ENST00000498223 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
CTTN-208ENST00000498223 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
CTTN-208ENST00000498223 LINC01600Q96MT4 127 aa6.84□□□□□ -1.31
CTTN-208ENST00000498223 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
CTTN-208ENST00000498223 Q6ZQY7 126 aa6.83□□□□□ -1.32
CTTN-208ENST00000498223 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
CTTN-208ENST00000498223 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
CTTN-208ENST00000498223 TEX49A0A1B0GTD5 131 aa6.81□□□□□ -1.32
CTTN-208ENST00000498223 H3BUT2 72 aa6.81□□□□□ -1.32
CTTN-208ENST00000498223 DNAL4O96015 105 aa6.81□□□□□ -1.32
CTTN-208ENST00000498223 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
CTTN-208ENST00000498223 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
CTTN-208ENST00000498223 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
CTTN-208ENST00000498223 IGLV9-49A0A0B4J1Y8 123 aa6.8□□□□□ -1.32
CTTN-208ENST00000498223 A0A1B0GX51 115 aa6.8□□□□□ -1.32
CTTN-208ENST00000498223 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
CTTN-208ENST00000498223 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
CTTN-208ENST00000498223 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
CTTN-208ENST00000498223 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
CTTN-208ENST00000498223 A0A087X002 238 aa6.79□□□□□ -1.32
CTTN-208ENST00000498223 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
CTTN-208ENST00000498223 TAX1BP3O14907 124 aa6.79□□□□□ -1.32
CTTN-208ENST00000498223 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
CTTN-208ENST00000498223 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
CTTN-208ENST00000498223 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
CTTN-208ENST00000498223 GHRHP01286 108 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms