RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 ESRGQ1W209 222 aa13.01□□□□□ -0.33
NKX2-1-202ENST00000498187 LINC00528Q8N1L1 170 aa13.01□□□□□ -0.33
NKX2-1-202ENST00000498187 RMI2Q96E14 147 aa13□□□□□ -0.33
NKX2-1-202ENST00000498187 NDUFC1O43677 76 aa13□□□□□ -0.33
NKX2-1-202ENST00000498187 HRCT1Q6UXD1 115 aa12.99□□□□□ -0.33
NKX2-1-202ENST00000498187 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
NKX2-1-202ENST00000498187 C1orf43Q9BWL3 253 aa12.98□□□□□ -0.33
NKX2-1-202ENST00000498187 F8WEM9 126 aa12.97□□□□□ -0.33
NKX2-1-202ENST00000498187 MRAPQ8TCY5 172 aa12.96□□□□□ -0.33
NKX2-1-202ENST00000498187 STAB1Q9NY15 2570 aa12.96□□□□□ -0.33
NKX2-1-202ENST00000498187 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
NKX2-1-202ENST00000498187 BPY2O14599 106 aa12.95□□□□□ -0.34
NKX2-1-202ENST00000498187 NREPQ16612 68 aa12.95□□□□□ -0.34
NKX2-1-202ENST00000498187 Q6ZRP5 223 aa12.95□□□□□ -0.34
NKX2-1-202ENST00000498187 KRTAP24-1Q3LI83 254 aa12.94□□□□□ -0.34
NKX2-1-202ENST00000498187 COL6A5A8TX70 2615 aa12.93□□□□□ -0.34
NKX2-1-202ENST00000498187 LINC01556Q5JQF7 62 aa12.93□□□□□ -0.34
NKX2-1-202ENST00000498187 ERC2-IT1O76042 136 aa12.92□□□□□ -0.34
NKX2-1-202ENST00000498187 DEFB131BA0A096LNP1 70 aa12.91□□□□□ -0.34
NKX2-1-202ENST00000498187 PKD1L1Q8TDX9 2849 aa12.91□□□□□ -0.34
NKX2-1-202ENST00000498187 ATP5EP56381 51 aaPredicted RBP12.9□□□□□ -0.34
NKX2-1-202ENST00000498187 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
NKX2-1-202ENST00000498187 C11orf45Q8TAV5 145 aa12.89□□□□□ -0.35
NKX2-1-202ENST00000498187 TMEM254Q8TBM7 123 aa12.89□□□□□ -0.35
NKX2-1-202ENST00000498187 IGKV4-1P06312 121 aa12.88□□□□□ -0.35
NKX2-1-202ENST00000498187 SEC61GP60059 68 aa12.88□□□□□ -0.35
NKX2-1-202ENST00000498187 SMIM26A0A096LP01 95 aa12.87□□□□□ -0.35
NKX2-1-202ENST00000498187 KCNQ1DNQ9H478 68 aa12.87□□□□□ -0.35
NKX2-1-202ENST00000498187 Q8N9L7 120 aa12.87□□□□□ -0.35
NKX2-1-202ENST00000498187 NKAPP1Q8N9T2 125 aa12.86□□□□□ -0.35
NKX2-1-202ENST00000498187 TENM3Q9P273 2699 aa12.85□□□□□ -0.35
NKX2-1-202ENST00000498187 SERTAD4-AS1Q5TG53 156 aa12.84□□□□□ -0.35
NKX2-1-202ENST00000498187 C3orf84H3BNL1 204 aa12.83□□□□□ -0.36
NKX2-1-202ENST00000498187 DEFB105AQ8NG35 78 aa12.83□□□□□ -0.36
NKX2-1-202ENST00000498187 IGLV5-48A0A075B6I7 105 aa12.82□□□□□ -0.36
NKX2-1-202ENST00000498187 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
NKX2-1-202ENST00000498187 Q8N377 158 aa12.82□□□□□ -0.36
NKX2-1-202ENST00000498187 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
NKX2-1-202ENST00000498187 OCR1Q9BZK8 76 aa12.82□□□□□ -0.36
NKX2-1-202ENST00000498187 A0A1B0GW54 56 aa12.81□□□□□ -0.36
NKX2-1-202ENST00000498187 ANK2Q01484 3957 aa12.81□□□□□ -0.36
NKX2-1-202ENST00000498187 DHRS4-AS1Q9P1J3 65 aa12.79□□□□□ -0.36
NKX2-1-202ENST00000498187 FUSP35637 526 aaKnown RBP eCLIP12.79□□□□□ -0.36
NKX2-1-202ENST00000498187 FP248Q71RG6 208 aaPredicted RBP12.78□□□□□ -0.36
NKX2-1-202ENST00000498187 A0A0U1RQV1 116 aa12.77□□□□□ -0.36
NKX2-1-202ENST00000498187 PRYO14603 147 aa12.77□□□□□ -0.37
NKX2-1-202ENST00000498187 TLX1NBP0CAT3 122 aa12.76□□□□□ -0.37
NKX2-1-202ENST00000498187 Q6ZRX8 168 aa12.74□□□□□ -0.37
NKX2-1-202ENST00000498187 PLA2G2DQ9UNK4 145 aa12.74□□□□□ -0.37
NKX2-1-202ENST00000498187 CASC10Q5T4H9 136 aa12.74□□□□□ -0.37
NKX2-1-202ENST00000498187 LINC00588Q9Y4M8 146 aa12.74□□□□□ -0.37
NKX2-1-202ENST00000498187 CMYA5Q8N3K9 4069 aa12.74□□□□□ -0.37
NKX2-1-202ENST00000498187 RPL37AP8A6NKH3 93 aa12.73□□□□□ -0.37
NKX2-1-202ENST00000498187 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
NKX2-1-202ENST00000498187 LINC00336Q6ZUF6 198 aa12.71□□□□□ -0.38
NKX2-1-202ENST00000498187 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
NKX2-1-202ENST00000498187 A0A1W2PNM2 257 aa12.7□□□□□ -0.38
NKX2-1-202ENST00000498187 C1orf137Q5JT78 98 aa12.7□□□□□ -0.38
NKX2-1-202ENST00000498187 Q9BRP9 147 aa12.7□□□□□ -0.38
NKX2-1-202ENST00000498187 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
NKX2-1-202ENST00000498187 PRO0628Q9UI54 55 aa12.7□□□□□ -0.38
NKX2-1-202ENST00000498187 IGLV1-50A0A075B6I6 118 aa12.69□□□□□ -0.38
NKX2-1-202ENST00000498187 KRTAP4-16G5E9R7 235 aaPredicted RBP12.69□□□□□ -0.38
NKX2-1-202ENST00000498187 TNP2Q05952 138 aa12.69□□□□□ -0.38
NKX2-1-202ENST00000498187 IGLV5-37A0A075B6J1 123 aa12.68□□□□□ -0.38
NKX2-1-202ENST00000498187 HIGD2AQ9BW72 106 aa12.68□□□□□ -0.38
NKX2-1-202ENST00000498187 SPRR1AP35321 89 aa12.68□□□□□ -0.38
NKX2-1-202ENST00000498187 Q8NBF4 154 aa12.67□□□□□ -0.38
NKX2-1-202ENST00000498187 SMIM29Q86T20 159 aa12.67□□□□□ -0.38
NKX2-1-202ENST00000498187 KRTAP7-1Q8IUC3 87 aa12.67□□□□□ -0.38
NKX2-1-202ENST00000498187 PRB2P02812 416 aaPredicted RBP12.66□□□□□ -0.38
NKX2-1-202ENST00000498187 SPRR4Q96PI1 79 aa12.64□□□□□ -0.39
NKX2-1-202ENST00000498187 MDFIQ99750 246 aa12.64□□□□□ -0.39
NKX2-1-202ENST00000498187 FAM30AQ9NZY2 134 aa12.64□□□□□ -0.39
NKX2-1-202ENST00000498187 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
NKX2-1-202ENST00000498187 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
NKX2-1-202ENST00000498187 V9GYY9 64 aa12.62□□□□□ -0.39
NKX2-1-202ENST00000498187 NOTCH1P46531 2555 aa12.62□□□□□ -0.39
NKX2-1-202ENST00000498187 LCE6AA0A183 80 aa12.61□□□□□ -0.39
NKX2-1-202ENST00000498187 MRPL55Q7Z7F7 128 aaKnown RBP12.6□□□□□ -0.39
NKX2-1-202ENST00000498187 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
NKX2-1-202ENST00000498187 DNAH1Q9P2D7 4330 aa12.59□□□□□ -0.39
NKX2-1-202ENST00000498187 DSCR10P59022 87 aa12.57□□□□□ -0.4
NKX2-1-202ENST00000498187 UBE2BP63146 152 aa12.57□□□□□ -0.4
NKX2-1-202ENST00000498187 NBEAL1Q6ZS30 2694 aa12.57□□□□□ -0.4
NKX2-1-202ENST00000498187 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
NKX2-1-202ENST00000498187 MGAM2Q2M2H8 2515 aa12.56□□□□□ -0.4
NKX2-1-202ENST00000498187 MPLKIPQ8TAP9 179 aa12.55□□□□□ -0.4
NKX2-1-202ENST00000498187 K7EQZ3 153 aa12.54□□□□□ -0.4
NKX2-1-202ENST00000498187 K7EIL1 84 aa12.52□□□□□ -0.41
NKX2-1-202ENST00000498187 REG3GQ6UW15 175 aa12.52□□□□□ -0.41
NKX2-1-202ENST00000498187 ZCCHC13Q8WW36 166 aaKnown RBP12.5□□□□□ -0.41
NKX2-1-202ENST00000498187 HUWE1Q7Z6Z7 4374 aaKnown RBP12.5□□□□□ -0.41
NKX2-1-202ENST00000498187 HCG22E2RYF7 251 aa12.49□□□□□ -0.41
NKX2-1-202ENST00000498187 LINC00476Q8WZB0 136 aa12.49□□□□□ -0.41
NKX2-1-202ENST00000498187 DNHD1Q96M86 4753 aa12.49□□□□□ -0.41
NKX2-1-202ENST00000498187 BRK1Q8WUW1 75 aa12.48□□□□□ -0.41
NKX2-1-202ENST00000498187 hDV103S1A0JD37 113 aa12.47□□□□□ -0.41
NKX2-1-202ENST00000498187 A0A096LNI7 61 aa12.45□□□□□ -0.42
NKX2-1-202ENST00000498187 PSCAO43653 123 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms