RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 NDUFC2-KCTD14E9PQ53 114 aa5.51□□□□□ -1.53
HLA-DMB-262ENST00000498020 C10orf25Q5T742 122 aa5.51□□□□□ -1.53
HLA-DMB-262ENST00000498020 SOSTDC1Q6X4U4 206 aa5.5□□□□□ -1.53
HLA-DMB-262ENST00000498020 NBDYA0A0U1RRE5 68 aa5.5□□□□□ -1.53
HLA-DMB-262ENST00000498020 Q8NAQ8 132 aa5.5□□□□□ -1.53
HLA-DMB-262ENST00000498020 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
HLA-DMB-262ENST00000498020 TRBV10-3A0A0K0K1G6 114 aa5.5□□□□□ -1.53
HLA-DMB-262ENST00000498020 C1orf137Q5JT78 98 aa5.49□□□□□ -1.53
HLA-DMB-262ENST00000498020 ESRGQ1W209 222 aa5.49□□□□□ -1.53
HLA-DMB-262ENST00000498020 CASC10Q5T4H9 136 aa5.49□□□□□ -1.53
HLA-DMB-262ENST00000498020 C9orf116Q5BN46 136 aaPredicted RBP5.49□□□□□ -1.53
HLA-DMB-262ENST00000498020 PDZD2O15018 2839 aa5.49□□□□□ -1.53
HLA-DMB-262ENST00000498020 F8WDY8 70 aa5.48□□□□□ -1.53
HLA-DMB-262ENST00000498020 Q6JHZ5 121 aa5.48□□□□□ -1.53
HLA-DMB-262ENST00000498020 LYPD5Q6UWN5 251 aa5.48□□□□□ -1.53
HLA-DMB-262ENST00000498020 COX7CP15954 63 aa5.48□□□□□ -1.53
HLA-DMB-262ENST00000498020 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
HLA-DMB-262ENST00000498020 REG3GQ6UW15 175 aa5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 LINC00337Q8N6G1 96 aa5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 Q8N814 137 aa5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 PRR4Q16378 134 aa5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
HLA-DMB-262ENST00000498020 H3BNG1 76 aa5.46□□□□□ -1.54
HLA-DMB-262ENST00000498020 SRRM2Q9UQ35 2752 aaKnown RBP5.46□□□□□ -1.54
HLA-DMB-262ENST00000498020 CIRBP-AS1Q8TBR5 109 aa5.45□□□□□ -1.54
HLA-DMB-262ENST00000498020 A6NED7 52 aa5.45□□□□□ -1.54
HLA-DMB-262ENST00000498020 CDIP1Q9H305 208 aa5.45□□□□□ -1.54
HLA-DMB-262ENST00000498020 PRR3P79522 188 aaKnown RBP5.44□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
HLA-DMB-262ENST00000498020 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
HLA-DMB-262ENST00000498020 PLA2G1BP04054 148 aaKnown RBP5.44□□□□□ -1.54
HLA-DMB-262ENST00000498020 Q6ZVQ6 151 aa5.44□□□□□ -1.54
HLA-DMB-262ENST00000498020 NBPF19A0A087WUL8 3843 aa5.44□□□□□ -1.54
HLA-DMB-262ENST00000498020 TRAV7A0A075B6U4 112 aa5.43□□□□□ -1.54
HLA-DMB-262ENST00000498020 PRYO14603 147 aa5.43□□□□□ -1.54
HLA-DMB-262ENST00000498020 Q6Q795 121 aa5.43□□□□□ -1.54
HLA-DMB-262ENST00000498020 FAM30AQ9NZY2 134 aa5.43□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC00588Q9Y4M8 146 aa5.43□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
HLA-DMB-262ENST00000498020 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
HLA-DMB-262ENST00000498020 Q8N3U1 123 aa5.42□□□□□ -1.54
HLA-DMB-262ENST00000498020 TM2D3Q9BRN9 247 aa5.42□□□□□ -1.54
HLA-DMB-262ENST00000498020 Q9BRP9 147 aa5.42□□□□□ -1.54
HLA-DMB-262ENST00000498020 A0A087WSZ3 146 aa5.42□□□□□ -1.54
HLA-DMB-262ENST00000498020 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
HLA-DMB-262ENST00000498020 A0A087WYN8 130 aa5.41□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC01547P58512 204 aaPredicted RBP5.41□□□□□ -1.54
HLA-DMB-262ENST00000498020 RTL8CO15255 209 aa5.41□□□□□ -1.54
HLA-DMB-262ENST00000498020 TENM1Q9UKZ4 2725 aa5.41□□□□□ -1.54
HLA-DMB-262ENST00000498020 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC00336Q6ZUF6 198 aa5.41□□□□□ -1.54
HLA-DMB-262ENST00000498020 Q6ZRU5 148 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 ZFHX3Q15911 3703 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 FAM218AQ96MZ4 157 aa5.4□□□□□ -1.54
HLA-DMB-262ENST00000498020 CELSR1Q9NYQ6 3014 aa5.4□□□□□ -1.55
HLA-DMB-262ENST00000498020 A0A0U1RQV1 116 aa5.4□□□□□ -1.55
HLA-DMB-262ENST00000498020 PRR34Q9NV39 138 aa5.4□□□□□ -1.55
HLA-DMB-262ENST00000498020 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
HLA-DMB-262ENST00000498020 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
HLA-DMB-262ENST00000498020 A0A087WVE0 104 aa5.38□□□□□ -1.55
HLA-DMB-262ENST00000498020 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
HLA-DMB-262ENST00000498020 CSMD1Q96PZ7 3565 aa5.38□□□□□ -1.55
HLA-DMB-262ENST00000498020 VWFP04275 2813 aa5.38□□□□□ -1.55
HLA-DMB-262ENST00000498020 CSMD2Q7Z408 3487 aa5.38□□□□□ -1.55
HLA-DMB-262ENST00000498020 TGP01266 2768 aa5.38□□□□□ -1.55
HLA-DMB-262ENST00000498020 GVQW2A0A096LPI5 108 aaPredicted RBP5.37□□□□□ -1.55
HLA-DMB-262ENST00000498020 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
HLA-DMB-262ENST00000498020 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
HLA-DMB-262ENST00000498020 PRLHP81277 87 aa5.36□□□□□ -1.55
HLA-DMB-262ENST00000498020 C22orf24Q9Y442 160 aa5.36□□□□□ -1.55
HLA-DMB-262ENST00000498020 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
HLA-DMB-262ENST00000498020 SMCR5Q8TEV8 140 aa5.35□□□□□ -1.55
HLA-DMB-262ENST00000498020 TRBV7-7A0A0K0K1E9 115 aa5.35□□□□□ -1.55
HLA-DMB-262ENST00000498020 RPL37AP61513 92 aaKnown RBP5.35□□□□□ -1.55
HLA-DMB-262ENST00000498020 PCOTHQ58A44 107 aa5.34□□□□□ -1.55
HLA-DMB-262ENST00000498020 TNP2Q05952 138 aa5.34□□□□□ -1.55
HLA-DMB-262ENST00000498020 H0Y9P7 68 aa5.34□□□□□ -1.56
HLA-DMB-262ENST00000498020 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
HLA-DMB-262ENST00000498020 LCE6AA0A183 80 aa5.33□□□□□ -1.56
HLA-DMB-262ENST00000498020 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
HLA-DMB-262ENST00000498020 TMEM254Q8TBM7 123 aa5.33□□□□□ -1.56
HLA-DMB-262ENST00000498020 HCG22E2RYF7 251 aa5.33□□□□□ -1.56
HLA-DMB-262ENST00000498020 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
HLA-DMB-262ENST00000498020 hDV103S1A0JD37 113 aa5.31□□□□□ -1.56
HLA-DMB-262ENST00000498020 LINC00167Q96N53 147 aa5.31□□□□□ -1.56
HLA-DMB-262ENST00000498020 SPINK1P00995 79 aa5.31□□□□□ -1.56
HLA-DMB-262ENST00000498020 IGLV6-57P01721 117 aa5.31□□□□□ -1.56
HLA-DMB-262ENST00000498020 CXCL6P80162 114 aa5.31□□□□□ -1.56
HLA-DMB-262ENST00000498020 FBN1P35555 2871 aaKnown RBP5.31□□□□□ -1.56
HLA-DMB-262ENST00000498020 RETNLBQ9BQ08 111 aa5.3□□□□□ -1.56
HLA-DMB-262ENST00000498020 APLNQ9ULZ1 77 aa5.3□□□□□ -1.56
HLA-DMB-262ENST00000498020 A0A1B0GW54 56 aa5.29□□□□□ -1.56
HLA-DMB-262ENST00000498020 VPREB1P12018 145 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms