RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 AKR1D1P51857 326 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 C2orf88Q9BSF0 95 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 TP73-AS1Q9UF72 201 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 UBE2D4Q9Y2X8 147 aa3.61□□□□□ -1.83
TMEM39A-212ENST00000497993 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 IGLV10-54A0A075B6I4 117 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 LINC00959A0A1B0GUT2 108 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 A0A1B0GV90 55 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 IGKV2-29A2NJV5 120 aaPredicted RBP3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 LINC01546A6NGU7 62 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 C1orf196B1AJZ1 125 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 NPYP01303 97 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 TRGC2P03986 189 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 AMMECR1LQ6DCA0 310 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 CLPSL2Q6UWE3 100 aa3.6□□□□□ -1.83
TMEM39A-212ENST00000497993 COLCA2A8K830 154 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 D6R8Y8 96 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 TAX1BP3O14907 124 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 TMEM136Q6ZRR5 245 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 PRR15Q8IV56 129 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 SPACA4Q8TDM5 124 aa3.59□□□□□ -1.83
TMEM39A-212ENST00000497993 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.84
TMEM39A-212ENST00000497993 IGHV3-64A0A075B6Q5 118 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 IGHV1-58A0A0C4DH39 117 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 LINC01549A6NIU2 74 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 C9JAW5 83 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 LEPROTO15243 131 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 CKS2P33552 79 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 MRPL54Q6P161 138 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 HRCT1Q6UXD1 115 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
TMEM39A-212ENST00000497993 A0A0B4J2C4 111 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 PANO1I0J062 215 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 DLEU1O43261 78 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 DPM2O94777 84 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 FCER1GP30273 86 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 SS18Q15532 418 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 Q6ZUT4 128 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 PRELID3AQ96N28 172 aa3.57□□□□□ -1.84
TMEM39A-212ENST00000497993 LGALS3P17931 250 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 NDUFA6P56556 154 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 RPL39P62891 51 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 Q8N8P6 123 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 DEFB104AQ8WTQ1 72 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 AMELXQ99217 191 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 NXT2Q9NPJ8 142 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 LINC00474Q9P2X8 69 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 HERC1Q15751 4861 aa3.56□□□□□ -1.84
TMEM39A-212ENST00000497993 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 A8MUU9 505 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 M0R378 163 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 SMR3BP02814 79 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 XCL1P47992 114 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 HAMPP81172 84 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 TNXBP22105 4242 aa3.55□□□□□ -1.84
TMEM39A-212ENST00000497993 H3BQ85 93 aa3.54□□□□□ -1.84
TMEM39A-212ENST00000497993 IFI27P40305 119 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-212ENST00000497993 UBE2BP63146 152 aa3.54□□□□□ -1.84
TMEM39A-212ENST00000497993 ST20-AS1Q8NBB2 130 aa3.54□□□□□ -1.84
TMEM39A-212ENST00000497993 MRPL35Q9NZE8 188 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-212ENST00000497993 A0A096LNI7 61 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 J3QR89 54 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 UBE2D1P51668 147 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 COX6A2Q02221 97 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 HIST3H2BBQ8N257 126 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 SMCR5Q8TEV8 140 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 SCGB3A1Q96QR1 104 aa3.53□□□□□ -1.84
TMEM39A-212ENST00000497993 TRAV13-1A0A0B4J241 112 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 IGKV3OR2-268A0A0C4DH90 116 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 LOC107984640A0A0U1RRK4 108 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 K7ERU9 68 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 RPL37AP61513 92 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 SEC11AP67812 179 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 TTTY13Q9BZ97 58 aa3.52□□□□□ -1.85
TMEM39A-212ENST00000497993 J3QQQ9 107 aa3.51□□□□□ -1.85
TMEM39A-212ENST00000497993 TMEM256-PLSCR3K7ERE1 68 aa3.51□□□□□ -1.85
TMEM39A-212ENST00000497993 SPAG11BQ08648 103 aa3.51□□□□□ -1.85
TMEM39A-212ENST00000497993 Q8IZM0 81 aa3.51□□□□□ -1.85
TMEM39A-212ENST00000497993 HIST1H2BLQ99880 126 aa3.51□□□□□ -1.85
TMEM39A-212ENST00000497993 ERG28Q9UKR5 140 aa3.51□□□□□ -1.85
TMEM39A-212ENST00000497993 TRBV7-6A0A0J9YX20 115 aa3.5□□□□□ -1.85
TMEM39A-212ENST00000497993 NDUFA1O15239 70 aa3.5□□□□□ -1.85
TMEM39A-212ENST00000497993 PYY3Q5JQD4 70 aa3.5□□□□□ -1.85
TMEM39A-212ENST00000497993 C5orf38Q86SI9 138 aa3.5□□□□□ -1.85
TMEM39A-212ENST00000497993 C18orf32Q8TCD1 76 aa3.5□□□□□ -1.85
TMEM39A-212ENST00000497993 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-212ENST00000497993 C20orf202A1L168 122 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms