RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 Q8NBF4 154 aa9.55□□□□□ -0.88
TRAPPC3-207ENST00000497251 ETDCA0A1B0GVM5 59 aa9.54□□□□□ -0.88
TRAPPC3-207ENST00000497251 NDUFC2O95298 119 aa9.54□□□□□ -0.88
TRAPPC3-207ENST00000497251 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
TRAPPC3-207ENST00000497251 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
TRAPPC3-207ENST00000497251 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC3-207ENST00000497251 TRBV10-3A0A0K0K1G6 114 aa9.53□□□□□ -0.88
TRAPPC3-207ENST00000497251 KRTDAPP60985 99 aa9.53□□□□□ -0.88
TRAPPC3-207ENST00000497251 SSBP3-AS1Q7Z2R9 100 aa9.53□□□□□ -0.88
TRAPPC3-207ENST00000497251 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
TRAPPC3-207ENST00000497251 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
TRAPPC3-207ENST00000497251 KRTAP4-16G5E9R7 235 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC3-207ENST00000497251 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
TRAPPC3-207ENST00000497251 C20orf202A1L168 122 aa9.51□□□□□ -0.89
TRAPPC3-207ENST00000497251 TIMM17BO60830 172 aa9.51□□□□□ -0.89
TRAPPC3-207ENST00000497251 DDTP30046 118 aa9.51□□□□□ -0.89
TRAPPC3-207ENST00000497251 LINC01547P58512 204 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC3-207ENST00000497251 AKR1D1P51857 326 aa9.5□□□□□ -0.89
TRAPPC3-207ENST00000497251 ADAMTSL4-AS1Q5T5F5 129 aa9.5□□□□□ -0.89
TRAPPC3-207ENST00000497251 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
TRAPPC3-207ENST00000497251 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
TRAPPC3-207ENST00000497251 LITAFQ99732 161 aa9.48□□□□□ -0.89
TRAPPC3-207ENST00000497251 SLC25A20O43772 301 aa9.47□□□□□ -0.89
TRAPPC3-207ENST00000497251 IGLV6-57P01721 117 aa9.47□□□□□ -0.89
TRAPPC3-207ENST00000497251 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
TRAPPC3-207ENST00000497251 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC3-207ENST00000497251 NPC2P61916 151 aa9.46□□□□□ -0.9
TRAPPC3-207ENST00000497251 LINC00308Q8TCZ7 52 aa9.46□□□□□ -0.9
TRAPPC3-207ENST00000497251 B5MCH6 92 aa9.45□□□□□ -0.9
TRAPPC3-207ENST00000497251 GAGE2AQ6NT46 116 aa9.45□□□□□ -0.9
TRAPPC3-207ENST00000497251 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
TRAPPC3-207ENST00000497251 CBY1Q9Y3M2 126 aa9.45□□□□□ -0.9
TRAPPC3-207ENST00000497251 TRAV23DV6A0A075B6W5 121 aa9.43□□□□□ -0.9
TRAPPC3-207ENST00000497251 HIST3H2BBQ8N257 126 aa9.43□□□□□ -0.9
TRAPPC3-207ENST00000497251 Q8N377 158 aa9.43□□□□□ -0.9
TRAPPC3-207ENST00000497251 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
TRAPPC3-207ENST00000497251 C5orf52A6NGY3 159 aa9.42□□□□□ -0.9
TRAPPC3-207ENST00000497251 SNRPEP62304 92 aaKnown RBP9.42□□□□□ -0.9
TRAPPC3-207ENST00000497251 MOBPQ13875 183 aa9.42□□□□□ -0.9
TRAPPC3-207ENST00000497251 JOSD1Q15040 202 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC3-207ENST00000497251 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
TRAPPC3-207ENST00000497251 Q6ZRX8 168 aa9.42□□□□□ -0.9
TRAPPC3-207ENST00000497251 S100A2P29034 98 aa9.41□□□□□ -0.9
TRAPPC3-207ENST00000497251 SCGB1D4Q6XE38 83 aa9.4□□□□□ -0.9
TRAPPC3-207ENST00000497251 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
TRAPPC3-207ENST00000497251 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.9
TRAPPC3-207ENST00000497251 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.9
TRAPPC3-207ENST00000497251 IGLV9-49A0A0B4J1Y8 123 aa9.39□□□□□ -0.91
TRAPPC3-207ENST00000497251 ZNF73O43830 326 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC3-207ENST00000497251 XP32Q5T750 250 aa9.39□□□□□ -0.91
TRAPPC3-207ENST00000497251 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
TRAPPC3-207ENST00000497251 Q9BRP9 147 aa9.39□□□□□ -0.91
TRAPPC3-207ENST00000497251 S100A6P06703 90 aa9.38□□□□□ -0.91
TRAPPC3-207ENST00000497251 Q6ZVH6 145 aa9.38□□□□□ -0.91
TRAPPC3-207ENST00000497251 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
TRAPPC3-207ENST00000497251 ERC2-IT1O76042 136 aa9.37□□□□□ -0.91
TRAPPC3-207ENST00000497251 IFITM1P13164 125 aa9.36□□□□□ -0.91
TRAPPC3-207ENST00000497251 HINT1P49773 126 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC3-207ENST00000497251 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
TRAPPC3-207ENST00000497251 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
TRAPPC3-207ENST00000497251 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
TRAPPC3-207ENST00000497251 SLC25A34Q6PIV7 304 aa9.33□□□□□ -0.92
TRAPPC3-207ENST00000497251 HSBP1L1C9JCN9 74 aa9.32□□□□□ -0.92
TRAPPC3-207ENST00000497251 C9orf153Q5TBE3 101 aa9.31□□□□□ -0.92
TRAPPC3-207ENST00000497251 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
TRAPPC3-207ENST00000497251 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
TRAPPC3-207ENST00000497251 DHRS4-AS1Q9P1J3 65 aa9.29□□□□□ -0.92
TRAPPC3-207ENST00000497251 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
TRAPPC3-207ENST00000497251 TRBV7-6A0A0J9YX20 115 aa9.27□□□□□ -0.93
TRAPPC3-207ENST00000497251 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
TRAPPC3-207ENST00000497251 SPRR1BP22528 89 aa9.26□□□□□ -0.93
TRAPPC3-207ENST00000497251 COX7BP24311 80 aa9.26□□□□□ -0.93
TRAPPC3-207ENST00000497251 ST20-AS1Q8NBB2 130 aa9.25□□□□□ -0.93
TRAPPC3-207ENST00000497251 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
TRAPPC3-207ENST00000497251 A6NDN8 102 aa9.24□□□□□ -0.93
TRAPPC3-207ENST00000497251 SCGB1D1O95968 90 aa9.24□□□□□ -0.93
TRAPPC3-207ENST00000497251 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
TRAPPC3-207ENST00000497251 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
TRAPPC3-207ENST00000497251 LAMTOR3Q9UHA4 124 aa9.23□□□□□ -0.93
TRAPPC3-207ENST00000497251 A0A1B0GWB2 263 aa9.22□□□□□ -0.93
TRAPPC3-207ENST00000497251 CD164Q04900 197 aa9.22□□□□□ -0.93
TRAPPC3-207ENST00000497251 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
TRAPPC3-207ENST00000497251 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.94
TRAPPC3-207ENST00000497251 A4D1N5 150 aa9.2□□□□□ -0.94
TRAPPC3-207ENST00000497251 COX8AP10176 69 aa9.18□□□□□ -0.94
TRAPPC3-207ENST00000497251 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
TRAPPC3-207ENST00000497251 Q5XG85 94 aa9.17□□□□□ -0.94
TRAPPC3-207ENST00000497251 SMIM11BQ8TCY0 68 aa9.17□□□□□ -0.94
TRAPPC3-207ENST00000497251 DLEU1O43261 78 aa9.16□□□□□ -0.94
TRAPPC3-207ENST00000497251 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
TRAPPC3-207ENST00000497251 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
TRAPPC3-207ENST00000497251 TEX49A0A1B0GTD5 131 aa9.15□□□□□ -0.94
TRAPPC3-207ENST00000497251 TAL2Q16559 108 aa9.15□□□□□ -0.94
TRAPPC3-207ENST00000497251 PRO1933Q9H354 126 aa9.15□□□□□ -0.94
TRAPPC3-207ENST00000497251 NHP2Q9NX24 153 aaKnown RBP9.15□□□□□ -0.94
TRAPPC3-207ENST00000497251 IGLV5-48A0A075B6I7 105 aa9.13□□□□□ -0.95
TRAPPC3-207ENST00000497251 MT1HP80294 61 aa9.13□□□□□ -0.95
TRAPPC3-207ENST00000497251 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
TRAPPC3-207ENST00000497251 VAMP3Q15836 100 aa9.12□□□□□ -0.95
TRAPPC3-207ENST00000497251 HRCT1Q6UXD1 115 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms