RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
SMC4-225ENST00000497203 ANKRD11Q6UB99 2663 aaPredicted RBP-0.35□□□□□ -2.47
SMC4-225ENST00000497203 TACC2O95359 2948 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 D6R8Y8 96 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 LEPROTL1O95214 131 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 LINC00032P0C843 101 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 SPRR2EP22531 72 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 HMGN3Q15651 99 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 KRTAP6-2Q3LI66 62 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 WFDC13Q8IUB5 93 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 MUSTN1Q8IVN3 82 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 TRGV9Q99603 122 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 SHPRHQ149N8 1683 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 MON2Q7Z3U7 1717 aa-0.35□□□□□ -2.47
SMC4-225ENST00000497203 SAMD9Q5K651 1589 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 HTTP42858 3142 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 S100A10P60903 97 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 SERP2Q8N6R1 65 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 FASNP49327 2511 aaKnown RBP-0.36□□□□□ -2.47
SMC4-225ENST00000497203 PEG3Q9GZU2 1588 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 CHD7Q9P2D1 2997 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 BOD1L1Q8NFC6 3051 aa-0.36□□□□□ -2.47
SMC4-225ENST00000497203 PRDM15P57071 1507 aaPredicted RBP-0.37□□□□□ -2.47
SMC4-225ENST00000497203 KALRNO60229 2985 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 EYSQ5T1H1 3165 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 H7BZZ5 65 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 ANKRD36BQ8N2N9 1353 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 LRRC9Q6ZRR7 1453 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 ADAMTS12P58397 1594 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 BCORQ6W2J9 1755 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 ZFHX4Q86UP3 3567 aa-0.37□□□□□ -2.47
SMC4-225ENST00000497203 SACSQ9NZJ4 4579 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 PTPN23Q9H3S7 1636 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 CYB5AP00167 134 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 IGLC2P0DOY2 106 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 IGLC3P0DOY3 106 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 FAUP35544 74 aaKnown RBP-0.38□□□□□ -2.47
SMC4-225ENST00000497203 SMIM11AP58511 58 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 C14orf144Q96I85 54 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 TRANK1O15050 2925 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 ANKRD36A6QL64 1941 aa-0.38□□□□□ -2.47
SMC4-225ENST00000497203 DNAH5Q8TE73 4624 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 DNAH1Q9P2D7 4330 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 PKHD1L1Q86WI1 4243 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 CLTCQ00610 1675 aaKnown RBP-0.39□□□□□ -2.47
SMC4-225ENST00000497203 PREX1Q8TCU6 1659 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 MTORP42345 2549 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 PKD1P98161 4303 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 ADGRG4Q8IZF6 3080 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 F8WEM9 126 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 COX6B2Q6YFQ2 88 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 UBE2D4Q9Y2X8 147 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 MYO15AQ9UKN7 3530 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 KIF20BQ96Q89 1820 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 REV3LO60673 3130 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 SMG1Q96Q15 3661 aaKnown RBP-0.39□□□□□ -2.47
SMC4-225ENST00000497203 CICQ96RK0 1608 aaPredicted RBP-0.39□□□□□ -2.47
SMC4-225ENST00000497203 EPRSP07814 1512 aaKnown RBP-0.39□□□□□ -2.47
SMC4-225ENST00000497203 ANKRD50Q9ULJ7 1429 aa-0.39□□□□□ -2.47
SMC4-225ENST00000497203 CCDC168Q8NDH2 2452 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 MAGI2Q86UL8 1455 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 PKD1L3Q7Z443 1732 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 AKAP9Q99996 3911 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 UTP20O75691 2785 aaKnown RBP-0.4□□□□□ -2.47
SMC4-225ENST00000497203 A0A1B0GUT8 65 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 H3BNG1 76 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 MT-ATP8P03928 68 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 COX7BP24311 80 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 DPY30Q9C005 99 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 ATMQ13315 3056 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 PRUNE2Q8WUY3 3088 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 CEP295Q9C0D2 2601 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 LRBAP50851 2863 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 SPG11Q96JI7 2443 aa-0.4□□□□□ -2.47
SMC4-225ENST00000497203 FANCAO15360 1455 aa-0.41□□□□□ -2.47
SMC4-225ENST00000497203 TEX14Q8IWB6 1497 aa-0.41□□□□□ -2.47
SMC4-225ENST00000497203 NRXN1Q9ULB1 1477 aa-0.41□□□□□ -2.47
SMC4-225ENST00000497203 CMYA5Q8N3K9 4069 aa-0.41□□□□□ -2.47
SMC4-225ENST00000497203 CFAP46Q8IYW2 2715 aa-0.41□□□□□ -2.47
SMC4-225ENST00000497203 VPS13BQ7Z7G8 4022 aa-0.41□□□□□ -2.47
SMC4-225ENST00000497203 LRRC7Q96NW7 1537 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 PEA15Q15121 130 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 PLGLAQ15195 96 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 LELP1Q5T871 98 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 GAFA1Q96PS6 74 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 CNTLNQ9NXG0 1405 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.41□□□□□ -2.48
SMC4-225ENST00000497203 CRYBG1Q9Y4K1 1723 aa-0.41□□□□□ -2.48
SMC4-225ENST00000497203 RGPD2P0DJD1 1756 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 IQCF6A8MYZ5 107 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 DCHS1Q96JQ0 3298 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 TROQ12816 1431 aaPredicted RBP-0.42□□□□□ -2.48
SMC4-225ENST00000497203 QSER1Q2KHR3 1735 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 DMXL1Q9Y485 3027 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 KNL1Q8NG31 2342 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 TRIOO75962 3097 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 ATP10BO94823 1461 aa-0.42□□□□□ -2.48
SMC4-225ENST00000497203 RGPD8O14715 1765 aaPredicted RBP-0.42□□□□□ -2.48
SMC4-225ENST00000497203 RGPD5Q99666 1765 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms