RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 MUC2Q02817 5179 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 ETDCA0A1B0GVM5 59 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 E9PLD3 99 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 NDUFC2O95298 119 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 LGALS3P17931 250 aaKnown RBP7.08□□□□□ -1.28
CLDN12-213ENST00000496677 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
CLDN12-213ENST00000496677 A0A0J9YXY3 114 aa7.07□□□□□ -1.28
CLDN12-213ENST00000496677 SYS1-DBNDD2H3BUS1 97 aa7.07□□□□□ -1.28
CLDN12-213ENST00000496677 DDTP30046 118 aa7.07□□□□□ -1.28
CLDN12-213ENST00000496677 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
CLDN12-213ENST00000496677 Q9BRP9 147 aa7.07□□□□□ -1.28
CLDN12-213ENST00000496677 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
CLDN12-213ENST00000496677 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
CLDN12-213ENST00000496677 TPRXLQ17RH7 258 aa7.06□□□□□ -1.28
CLDN12-213ENST00000496677 PPDPFQ9H3Y8 114 aa7.06□□□□□ -1.28
CLDN12-213ENST00000496677 LINC01545Q5VT33 79 aa7.05□□□□□ -1.28
CLDN12-213ENST00000496677 LITAFQ99732 161 aa7.05□□□□□ -1.28
CLDN12-213ENST00000496677 Q6ZRX8 168 aa7.04□□□□□ -1.28
CLDN12-213ENST00000496677 Q8NBF4 154 aa7.04□□□□□ -1.28
CLDN12-213ENST00000496677 S100A12P80511 92 aa7.03□□□□□ -1.28
CLDN12-213ENST00000496677 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
CLDN12-213ENST00000496677 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
CLDN12-213ENST00000496677 PET117Q6UWS5 81 aa7.02□□□□□ -1.29
CLDN12-213ENST00000496677 MIEN1Q9BRT3 115 aa7.02□□□□□ -1.29
CLDN12-213ENST00000496677 TRAV23DV6A0A075B6W5 121 aa7.01□□□□□ -1.29
CLDN12-213ENST00000496677 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
CLDN12-213ENST00000496677 TIMM17BO60830 172 aa7.01□□□□□ -1.29
CLDN12-213ENST00000496677 NPC2P61916 151 aa7.01□□□□□ -1.29
CLDN12-213ENST00000496677 S100A7L2Q5SY68 101 aa7.01□□□□□ -1.29
CLDN12-213ENST00000496677 SPINK1P00995 79 aa7□□□□□ -1.29
CLDN12-213ENST00000496677 C3orf79P0CE67 100 aa7□□□□□ -1.29
CLDN12-213ENST00000496677 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
CLDN12-213ENST00000496677 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
CLDN12-213ENST00000496677 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
CLDN12-213ENST00000496677 ZNF73O43830 326 aaPredicted RBP6.99□□□□□ -1.29
CLDN12-213ENST00000496677 CDIP1Q9H305 208 aa6.99□□□□□ -1.29
CLDN12-213ENST00000496677 MOBPQ13875 183 aa6.98□□□□□ -1.29
CLDN12-213ENST00000496677 KRTAP13-3Q3SY46 172 aa6.98□□□□□ -1.29
CLDN12-213ENST00000496677 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
CLDN12-213ENST00000496677 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
CLDN12-213ENST00000496677 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
CLDN12-213ENST00000496677 C5orf52A6NGY3 159 aa6.97□□□□□ -1.29
CLDN12-213ENST00000496677 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
CLDN12-213ENST00000496677 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
CLDN12-213ENST00000496677 ZNF815PA8K554 130 aa6.96□□□□□ -1.3
CLDN12-213ENST00000496677 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
CLDN12-213ENST00000496677 Q8N377 158 aa6.95□□□□□ -1.3
CLDN12-213ENST00000496677 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
CLDN12-213ENST00000496677 SPRR1BP22528 89 aa6.94□□□□□ -1.3
CLDN12-213ENST00000496677 SPANXDQ9BXN6 97 aa6.94□□□□□ -1.3
CLDN12-213ENST00000496677 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
CLDN12-213ENST00000496677 KRTDAPP60985 99 aa6.93□□□□□ -1.3
CLDN12-213ENST00000496677 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
CLDN12-213ENST00000496677 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
CLDN12-213ENST00000496677 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
CLDN12-213ENST00000496677 HINT1P49773 126 aaPredicted RBP6.92□□□□□ -1.3
CLDN12-213ENST00000496677 OR13C6PQ8NH95 151 aa6.92□□□□□ -1.3
CLDN12-213ENST00000496677 LINC00518Q8N0U6 118 aa6.91□□□□□ -1.3
CLDN12-213ENST00000496677 SLC25A20O43772 301 aa6.9□□□□□ -1.3
CLDN12-213ENST00000496677 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.3
CLDN12-213ENST00000496677 DHRS4-AS1Q9P1J3 65 aa6.9□□□□□ -1.3
CLDN12-213ENST00000496677 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.31
CLDN12-213ENST00000496677 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
CLDN12-213ENST00000496677 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
CLDN12-213ENST00000496677 COX7BP24311 80 aa6.88□□□□□ -1.31
CLDN12-213ENST00000496677 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
CLDN12-213ENST00000496677 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
CLDN12-213ENST00000496677 ATOH7Q8N100 152 aa6.88□□□□□ -1.31
CLDN12-213ENST00000496677 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
CLDN12-213ENST00000496677 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
CLDN12-213ENST00000496677 C20orf202A1L168 122 aa6.87□□□□□ -1.31
CLDN12-213ENST00000496677 IFITM1P13164 125 aa6.87□□□□□ -1.31
CLDN12-213ENST00000496677 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
CLDN12-213ENST00000496677 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
CLDN12-213ENST00000496677 Q6ZVH6 145 aa6.86□□□□□ -1.31
CLDN12-213ENST00000496677 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
CLDN12-213ENST00000496677 AKR1D1P51857 326 aa6.84□□□□□ -1.31
CLDN12-213ENST00000496677 LINC01547P58512 204 aaPredicted RBP6.84□□□□□ -1.31
CLDN12-213ENST00000496677 SLC25A34Q6PIV7 304 aa6.84□□□□□ -1.31
CLDN12-213ENST00000496677 SMIM29Q86T20 159 aa6.84□□□□□ -1.31
CLDN12-213ENST00000496677 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
CLDN12-213ENST00000496677 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
CLDN12-213ENST00000496677 HIST3H2BBQ8N257 126 aa6.83□□□□□ -1.32
CLDN12-213ENST00000496677 IGLV5-48A0A075B6I7 105 aa6.82□□□□□ -1.32
CLDN12-213ENST00000496677 TEX49A0A1B0GTD5 131 aa6.82□□□□□ -1.32
CLDN12-213ENST00000496677 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
CLDN12-213ENST00000496677 SNRPEP62304 92 aaKnown RBP6.82□□□□□ -1.32
CLDN12-213ENST00000496677 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
CLDN12-213ENST00000496677 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
CLDN12-213ENST00000496677 A6NDN8 102 aa6.81□□□□□ -1.32
CLDN12-213ENST00000496677 SEC61BP60468 96 aaKnown RBP6.81□□□□□ -1.32
CLDN12-213ENST00000496677 TAL2Q16559 108 aa6.81□□□□□ -1.32
CLDN12-213ENST00000496677 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
CLDN12-213ENST00000496677 CD164Q04900 197 aa6.8□□□□□ -1.32
CLDN12-213ENST00000496677 Q1RN00 199 aa6.8□□□□□ -1.32
CLDN12-213ENST00000496677 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
CLDN12-213ENST00000496677 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
CLDN12-213ENST00000496677 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms