RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 Q9BRP9 147 aa9.41□□□□□ -0.9
DNMT3A-215ENST00000496570 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
DNMT3A-215ENST00000496570 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
DNMT3A-215ENST00000496570 ERC2-IT1O76042 136 aa9.4□□□□□ -0.9
DNMT3A-215ENST00000496570 AKR1D1P51857 326 aa9.4□□□□□ -0.9
DNMT3A-215ENST00000496570 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
DNMT3A-215ENST00000496570 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
DNMT3A-215ENST00000496570 S100A6P06703 90 aa9.39□□□□□ -0.91
DNMT3A-215ENST00000496570 Q6ZRX8 168 aa9.39□□□□□ -0.91
DNMT3A-215ENST00000496570 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
DNMT3A-215ENST00000496570 S100A12P80511 92 aa9.38□□□□□ -0.91
DNMT3A-215ENST00000496570 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
DNMT3A-215ENST00000496570 ZNF73O43830 326 aaPredicted RBP9.37□□□□□ -0.91
DNMT3A-215ENST00000496570 TSPAN13O95857 204 aa9.37□□□□□ -0.91
DNMT3A-215ENST00000496570 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
DNMT3A-215ENST00000496570 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
DNMT3A-215ENST00000496570 ZNF706Q9Y5V0 76 aaPredicted RBP9.36□□□□□ -0.91
DNMT3A-215ENST00000496570 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
DNMT3A-215ENST00000496570 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
DNMT3A-215ENST00000496570 IFITM1P13164 125 aa9.32□□□□□ -0.92
DNMT3A-215ENST00000496570 Q6ZVH6 145 aa9.32□□□□□ -0.92
DNMT3A-215ENST00000496570 MUSTN1Q8IVN3 82 aa9.32□□□□□ -0.92
DNMT3A-215ENST00000496570 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
DNMT3A-215ENST00000496570 TMA7Q9Y2S6 64 aaKnown RBP9.32□□□□□ -0.92
DNMT3A-215ENST00000496570 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
DNMT3A-215ENST00000496570 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
DNMT3A-215ENST00000496570 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
DNMT3A-215ENST00000496570 PRR4Q16378 134 aa9.29□□□□□ -0.92
DNMT3A-215ENST00000496570 CBY1Q9Y3M2 126 aa9.29□□□□□ -0.92
DNMT3A-215ENST00000496570 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
DNMT3A-215ENST00000496570 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
DNMT3A-215ENST00000496570 HSBP1L1C9JCN9 74 aa9.27□□□□□ -0.93
DNMT3A-215ENST00000496570 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
DNMT3A-215ENST00000496570 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
DNMT3A-215ENST00000496570 CTAG1AP78358 180 aa9.26□□□□□ -0.93
DNMT3A-215ENST00000496570 C6orf99Q4VX62 202 aa9.26□□□□□ -0.93
DNMT3A-215ENST00000496570 Q8NBF4 154 aa9.26□□□□□ -0.93
DNMT3A-215ENST00000496570 RETNLBQ9BQ08 111 aa9.26□□□□□ -0.93
DNMT3A-215ENST00000496570 HINT1P49773 126 aaPredicted RBP9.24□□□□□ -0.93
DNMT3A-215ENST00000496570 COX7BP24311 80 aa9.23□□□□□ -0.93
DNMT3A-215ENST00000496570 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
DNMT3A-215ENST00000496570 DHRS4-AS1Q9P1J3 65 aa9.23□□□□□ -0.93
DNMT3A-215ENST00000496570 IGLV9-49A0A0B4J1Y8 123 aa9.22□□□□□ -0.93
DNMT3A-215ENST00000496570 TRBV7-6A0A0J9YX20 115 aa9.22□□□□□ -0.93
DNMT3A-215ENST00000496570 A6NDN8 102 aa9.22□□□□□ -0.93
DNMT3A-215ENST00000496570 COX8AP10176 69 aa9.22□□□□□ -0.93
DNMT3A-215ENST00000496570 MOBPQ13875 183 aa9.22□□□□□ -0.93
DNMT3A-215ENST00000496570 SPRR1BP22528 89 aa9.21□□□□□ -0.94
DNMT3A-215ENST00000496570 SSBP3-AS1Q7Z2R9 100 aa9.2□□□□□ -0.94
DNMT3A-215ENST00000496570 TRAV13-2A0A0B4J235 113 aa9.19□□□□□ -0.94
DNMT3A-215ENST00000496570 A4D1N5 150 aa9.19□□□□□ -0.94
DNMT3A-215ENST00000496570 DLEU1O43261 78 aa9.19□□□□□ -0.94
DNMT3A-215ENST00000496570 SMIM11BQ8TCY0 68 aa9.19□□□□□ -0.94
DNMT3A-215ENST00000496570 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
DNMT3A-215ENST00000496570 SPINK1P00995 79 aa9.16□□□□□ -0.94
DNMT3A-215ENST00000496570 LINC01547P58512 204 aaPredicted RBP9.16□□□□□ -0.94
DNMT3A-215ENST00000496570 C14orf144Q96I85 54 aa9.16□□□□□ -0.94
DNMT3A-215ENST00000496570 PAM16Q9Y3D7 125 aa9.16□□□□□ -0.94
DNMT3A-215ENST00000496570 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
DNMT3A-215ENST00000496570 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
DNMT3A-215ENST00000496570 LOC105371267A0A1B0GV96 52 aa9.13□□□□□ -0.95
DNMT3A-215ENST00000496570 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
DNMT3A-215ENST00000496570 C2orf91Q6ZV80 131 aa9.13□□□□□ -0.95
DNMT3A-215ENST00000496570 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
DNMT3A-215ENST00000496570 IGLV5-48A0A075B6I7 105 aa9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 RPS29P62273 56 aaKnown RBP9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 SMIM29Q86T20 159 aa9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 C12orf57Q99622 126 aa9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
DNMT3A-215ENST00000496570 Q8N377 158 aa9.11□□□□□ -0.95
DNMT3A-215ENST00000496570 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
DNMT3A-215ENST00000496570 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
DNMT3A-215ENST00000496570 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
DNMT3A-215ENST00000496570 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
DNMT3A-215ENST00000496570 TAL2Q16559 108 aa9.09□□□□□ -0.95
DNMT3A-215ENST00000496570 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
DNMT3A-215ENST00000496570 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
DNMT3A-215ENST00000496570 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
DNMT3A-215ENST00000496570 Q1RN00 199 aa9.08□□□□□ -0.96
DNMT3A-215ENST00000496570 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
DNMT3A-215ENST00000496570 MUC2Q02817 5179 aa9.07□□□□□ -0.96
DNMT3A-215ENST00000496570 CFC1BP0CG36 223 aa9.07□□□□□ -0.96
DNMT3A-215ENST00000496570 CFC1P0CG37 223 aa9.07□□□□□ -0.96
DNMT3A-215ENST00000496570 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
DNMT3A-215ENST00000496570 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
DNMT3A-215ENST00000496570 VAMP3Q15836 100 aa9.04□□□□□ -0.96
DNMT3A-215ENST00000496570 KRTAP13-3Q3SY46 172 aa9.04□□□□□ -0.96
DNMT3A-215ENST00000496570 SLC25A20O43772 301 aa9.03□□□□□ -0.96
DNMT3A-215ENST00000496570 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 A0A0G2JQZ4 141 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 SMIM6P0DI80 62 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 HRCT1Q6UXD1 115 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 Q6ZQY7 126 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 CEND1Q8N111 149 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
DNMT3A-215ENST00000496570 PRO1933Q9H354 126 aa9□□□□□ -0.97
DNMT3A-215ENST00000496570 FXYD2P54710 66 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms