RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 HIST1H2BJP06899 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BOP23527 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BBP33778 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BDP58876 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BCP62807 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST2H2BEQ16778 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BHQ93079 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BNQ99877 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BMQ99879 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
RAPGEF3-214ENST00000495465 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
RAPGEF3-214ENST00000495465 JOSD1Q15040 202 aaPredicted RBP8.29□□□□□ -1.08
RAPGEF3-214ENST00000495465 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
RAPGEF3-214ENST00000495465 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
RAPGEF3-214ENST00000495465 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.09
RAPGEF3-214ENST00000495465 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
RAPGEF3-214ENST00000495465 ST20-AS1Q8NBB2 130 aa8.26□□□□□ -1.09
RAPGEF3-214ENST00000495465 LINC00308Q8TCZ7 52 aa8.26□□□□□ -1.09
RAPGEF3-214ENST00000495465 LITAFQ99732 161 aa8.26□□□□□ -1.09
RAPGEF3-214ENST00000495465 ZNF815PA8K554 130 aa8.25□□□□□ -1.09
RAPGEF3-214ENST00000495465 HINT1P49773 126 aaPredicted RBP8.25□□□□□ -1.09
RAPGEF3-214ENST00000495465 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
RAPGEF3-214ENST00000495465 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
RAPGEF3-214ENST00000495465 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
RAPGEF3-214ENST00000495465 SPANXCQ9NY87 97 aa8.24□□□□□ -1.09
RAPGEF3-214ENST00000495465 CBY1Q9Y3M2 126 aa8.24□□□□□ -1.09
RAPGEF3-214ENST00000495465 TIMM17BO60830 172 aa8.23□□□□□ -1.09
RAPGEF3-214ENST00000495465 C3orf79P0CE67 100 aa8.23□□□□□ -1.09
RAPGEF3-214ENST00000495465 Q8N377 158 aa8.23□□□□□ -1.09
RAPGEF3-214ENST00000495465 SLC25A20O43772 301 aa8.21□□□□□ -1.1
RAPGEF3-214ENST00000495465 KRTDAPP60985 99 aa8.21□□□□□ -1.1
RAPGEF3-214ENST00000495465 RPS29P62273 56 aaKnown RBP8.21□□□□□ -1.1
RAPGEF3-214ENST00000495465 C5orf52A6NGY3 159 aa8.19□□□□□ -1.1
RAPGEF3-214ENST00000495465 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
RAPGEF3-214ENST00000495465 SPANXDQ9BXN6 97 aa8.19□□□□□ -1.1
RAPGEF3-214ENST00000495465 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
RAPGEF3-214ENST00000495465 COA6Q5JTJ3 125 aaKnown RBP8.17□□□□□ -1.1
RAPGEF3-214ENST00000495465 SCGB1D4Q6XE38 83 aa8.17□□□□□ -1.1
RAPGEF3-214ENST00000495465 LINC00518Q8N0U6 118 aa8.17□□□□□ -1.1
RAPGEF3-214ENST00000495465 COX7BP24311 80 aa8.16□□□□□ -1.1
RAPGEF3-214ENST00000495465 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
RAPGEF3-214ENST00000495465 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
RAPGEF3-214ENST00000495465 C20orf202A1L168 122 aa8.15□□□□□ -1.1
RAPGEF3-214ENST00000495465 ANKRD39Q53RE8 183 aa8.15□□□□□ -1.1
RAPGEF3-214ENST00000495465 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
RAPGEF3-214ENST00000495465 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
RAPGEF3-214ENST00000495465 SPRR1BP22528 89 aa8.14□□□□□ -1.11
RAPGEF3-214ENST00000495465 ELOF1P60002 83 aaKnown RBP8.14□□□□□ -1.11
RAPGEF3-214ENST00000495465 SLC25A34Q6PIV7 304 aa8.14□□□□□ -1.11
RAPGEF3-214ENST00000495465 DEFB105AQ8NG35 78 aa8.14□□□□□ -1.11
RAPGEF3-214ENST00000495465 LAMTOR3Q9UHA4 124 aa8.14□□□□□ -1.11
RAPGEF3-214ENST00000495465 SEC61BP60468 96 aaKnown RBP8.13□□□□□ -1.11
RAPGEF3-214ENST00000495465 TAL2Q16559 108 aa8.13□□□□□ -1.11
RAPGEF3-214ENST00000495465 A6NDN8 102 aa8.11□□□□□ -1.11
RAPGEF3-214ENST00000495465 Q1RN00 199 aa8.11□□□□□ -1.11
RAPGEF3-214ENST00000495465 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
RAPGEF3-214ENST00000495465 KRTAP4-1Q9BYQ7 146 aa8.11□□□□□ -1.11
RAPGEF3-214ENST00000495465 IFITM1P13164 125 aa8.1□□□□□ -1.11
RAPGEF3-214ENST00000495465 MUSTN1Q8IVN3 82 aa8.1□□□□□ -1.11
RAPGEF3-214ENST00000495465 COPS9Q8WXC6 57 aa8.1□□□□□ -1.11
RAPGEF3-214ENST00000495465 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
RAPGEF3-214ENST00000495465 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
RAPGEF3-214ENST00000495465 KRTAP9-2Q9BYQ4 174 aa8.09□□□□□ -1.11
RAPGEF3-214ENST00000495465 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
RAPGEF3-214ENST00000495465 XP32Q5T750 250 aa8.08□□□□□ -1.12
RAPGEF3-214ENST00000495465 Q6ZVH6 145 aa8.07□□□□□ -1.12
RAPGEF3-214ENST00000495465 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
RAPGEF3-214ENST00000495465 PRO1933Q9H354 126 aa8.06□□□□□ -1.12
RAPGEF3-214ENST00000495465 AKR1D1P51857 326 aa8.05□□□□□ -1.12
RAPGEF3-214ENST00000495465 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
RAPGEF3-214ENST00000495465 H7C2G1 150 aa8.04□□□□□ -1.12
RAPGEF3-214ENST00000495465 TRAV13-2A0A0B4J235 113 aa8.03□□□□□ -1.12
RAPGEF3-214ENST00000495465 LINC01547P58512 204 aaPredicted RBP8.03□□□□□ -1.12
RAPGEF3-214ENST00000495465 CD164Q04900 197 aa8.03□□□□□ -1.12
RAPGEF3-214ENST00000495465 SMIM29Q86T20 159 aa8.03□□□□□ -1.12
RAPGEF3-214ENST00000495465 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
RAPGEF3-214ENST00000495465 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
RAPGEF3-214ENST00000495465 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
RAPGEF3-214ENST00000495465 A4D1N5 150 aa8.01□□□□□ -1.13
RAPGEF3-214ENST00000495465 SNRPEP62304 92 aaKnown RBP8.01□□□□□ -1.13
RAPGEF3-214ENST00000495465 HIST3H2BBQ8N257 126 aa8□□□□□ -1.13
RAPGEF3-214ENST00000495465 S100A2P29034 98 aa7.99□□□□□ -1.13
RAPGEF3-214ENST00000495465 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
RAPGEF3-214ENST00000495465 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
RAPGEF3-214ENST00000495465 HSBP1L1C9JCN9 74 aa7.98□□□□□ -1.13
RAPGEF3-214ENST00000495465 VAMP3Q15836 100 aa7.97□□□□□ -1.13
RAPGEF3-214ENST00000495465 PCOTHQ58A44 107 aa7.97□□□□□ -1.13
RAPGEF3-214ENST00000495465 C1orf195Q5TG92 126 aa7.96□□□□□ -1.14
RAPGEF3-214ENST00000495465 Q5XG85 94 aa7.95□□□□□ -1.14
RAPGEF3-214ENST00000495465 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
RAPGEF3-214ENST00000495465 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
RAPGEF3-214ENST00000495465 F8WEM9 126 aa7.92□□□□□ -1.14
RAPGEF3-214ENST00000495465 S100A6P06703 90 aa7.92□□□□□ -1.14
RAPGEF3-214ENST00000495465 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
RAPGEF3-214ENST00000495465 Q6ZQY7 126 aa7.91□□□□□ -1.14
RAPGEF3-214ENST00000495465 SCGB1D1O95968 90 aa7.9□□□□□ -1.14
RAPGEF3-214ENST00000495465 TCL1BO95988 128 aa7.9□□□□□ -1.14
RAPGEF3-214ENST00000495465 LCE2CQ5TA81 110 aa7.9□□□□□ -1.14
RAPGEF3-214ENST00000495465 C12orf57Q99622 126 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms