RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 HERVK_113P61574 105 aa5.51□□□□□ -1.53
MSH5-218ENST00000494646 NPC2P61916 151 aa5.51□□□□□ -1.53
MSH5-218ENST00000494646 LGALS3P17931 250 aaKnown RBP5.5□□□□□ -1.53
MSH5-218ENST00000494646 DDTP30046 118 aa5.5□□□□□ -1.53
MSH5-218ENST00000494646 S100A12P80511 92 aa5.5□□□□□ -1.53
MSH5-218ENST00000494646 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
MSH5-218ENST00000494646 LOC107984156A0A0G2JMH3 177 aa5.49□□□□□ -1.53
MSH5-218ENST00000494646 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
MSH5-218ENST00000494646 SPAG11AQ6PDA7 123 aa5.49□□□□□ -1.53
MSH5-218ENST00000494646 ARL17AQ8IVW1 177 aa5.49□□□□□ -1.53
MSH5-218ENST00000494646 Q8NBF4 154 aa5.49□□□□□ -1.53
MSH5-218ENST00000494646 MIEN1Q9BRT3 115 aa5.49□□□□□ -1.53
MSH5-218ENST00000494646 NMUP48645 174 aa5.48□□□□□ -1.53
MSH5-218ENST00000494646 S100A7L2Q5SY68 101 aa5.48□□□□□ -1.53
MSH5-218ENST00000494646 ADAMTSL4-AS1Q5T5F5 129 aa5.48□□□□□ -1.53
MSH5-218ENST00000494646 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
MSH5-218ENST00000494646 A0A0J9YXY3 114 aa5.47□□□□□ -1.53
MSH5-218ENST00000494646 TRBV10-2A0A0K0K1G8 114 aa5.47□□□□□ -1.53
MSH5-218ENST00000494646 SOSTDC1Q6X4U4 206 aa5.47□□□□□ -1.53
MSH5-218ENST00000494646 Q9BRP9 147 aa5.47□□□□□ -1.53
MSH5-218ENST00000494646 SPANXB1Q9NS25 103 aaPredicted RBP5.46□□□□□ -1.54
MSH5-218ENST00000494646 E9PLD3 99 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 SYS1-DBNDD2H3BUS1 97 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 NDUFC2O95298 119 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 IGLV6-57P01721 117 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
MSH5-218ENST00000494646 MOBPQ13875 183 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
MSH5-218ENST00000494646 TRAV23DV6A0A075B6W5 121 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BKO60814 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BJP06899 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BOP23527 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BBP33778 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BDP58876 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BCP62807 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST2H2BEQ16778 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.44□□□□□ -1.54
MSH5-218ENST00000494646 Q6ZRX8 168 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BHQ93079 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BNQ99877 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 HIST1H2BMQ99879 126 aa5.44□□□□□ -1.54
MSH5-218ENST00000494646 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
MSH5-218ENST00000494646 SPINK1P00995 79 aa5.43□□□□□ -1.54
MSH5-218ENST00000494646 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
MSH5-218ENST00000494646 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
MSH5-218ENST00000494646 OR13C6PQ8NH95 151 aa5.43□□□□□ -1.54
MSH5-218ENST00000494646 ZNF73O43830 326 aaPredicted RBP5.42□□□□□ -1.54
MSH5-218ENST00000494646 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
MSH5-218ENST00000494646 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
MSH5-218ENST00000494646 JOSD1Q15040 202 aaPredicted RBP5.41□□□□□ -1.54
MSH5-218ENST00000494646 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
MSH5-218ENST00000494646 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
MSH5-218ENST00000494646 LITAFQ99732 161 aa5.41□□□□□ -1.54
MSH5-218ENST00000494646 ZNF815PA8K554 130 aa5.4□□□□□ -1.54
MSH5-218ENST00000494646 C3orf79P0CE67 100 aa5.4□□□□□ -1.54
MSH5-218ENST00000494646 HINT1P49773 126 aaPredicted RBP5.4□□□□□ -1.54
MSH5-218ENST00000494646 C9orf153Q5TBE3 101 aa5.4□□□□□ -1.54
MSH5-218ENST00000494646 KRTDAPP60985 99 aa5.39□□□□□ -1.55
MSH5-218ENST00000494646 VAMP3Q15836 100 aa5.39□□□□□ -1.55
MSH5-218ENST00000494646 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
MSH5-218ENST00000494646 Q8N377 158 aa5.39□□□□□ -1.55
MSH5-218ENST00000494646 SPANXCQ9NY87 97 aa5.39□□□□□ -1.55
MSH5-218ENST00000494646 TIMM17BO60830 172 aa5.38□□□□□ -1.55
MSH5-218ENST00000494646 HRCT1Q6UXD1 115 aa5.37□□□□□ -1.55
MSH5-218ENST00000494646 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
MSH5-218ENST00000494646 SLC25A20O43772 301 aa5.36□□□□□ -1.55
MSH5-218ENST00000494646 DEFB105AQ8NG35 78 aa5.36□□□□□ -1.55
MSH5-218ENST00000494646 COX7BP24311 80 aa5.35□□□□□ -1.55
MSH5-218ENST00000494646 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
MSH5-218ENST00000494646 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
MSH5-218ENST00000494646 LINC00518Q8N0U6 118 aa5.35□□□□□ -1.55
MSH5-218ENST00000494646 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
MSH5-218ENST00000494646 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
MSH5-218ENST00000494646 TAL2Q16559 108 aa5.34□□□□□ -1.55
MSH5-218ENST00000494646 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
MSH5-218ENST00000494646 DHRS4-AS1Q9P1J3 65 aa5.34□□□□□ -1.55
MSH5-218ENST00000494646 SPRR1BP22528 89 aa5.33□□□□□ -1.56
MSH5-218ENST00000494646 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
MSH5-218ENST00000494646 COA6Q5JTJ3 125 aaKnown RBP5.33□□□□□ -1.56
MSH5-218ENST00000494646 MUSTN1Q8IVN3 82 aa5.33□□□□□ -1.56
MSH5-218ENST00000494646 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
MSH5-218ENST00000494646 A6NDN8 102 aa5.32□□□□□ -1.56
MSH5-218ENST00000494646 ELOF1P60002 83 aaKnown RBP5.32□□□□□ -1.56
MSH5-218ENST00000494646 Q1RN00 199 aa5.32□□□□□ -1.56
MSH5-218ENST00000494646 PCP2Q8IVA1 136 aa5.32□□□□□ -1.56
MSH5-218ENST00000494646 LAMTOR3Q9UHA4 124 aa5.32□□□□□ -1.56
MSH5-218ENST00000494646 C20orf202A1L168 122 aa5.31□□□□□ -1.56
MSH5-218ENST00000494646 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
MSH5-218ENST00000494646 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
MSH5-218ENST00000494646 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
MSH5-218ENST00000494646 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
MSH5-218ENST00000494646 H7C2G1 150 aa5.29□□□□□ -1.56
MSH5-218ENST00000494646 IFITM1P13164 125 aa5.29□□□□□ -1.56
MSH5-218ENST00000494646 XP32Q5T750 250 aa5.29□□□□□ -1.56
MSH5-218ENST00000494646 A0A0G2JQZ4 141 aa5.28□□□□□ -1.56
MSH5-218ENST00000494646 SMIM29Q86T20 159 aa5.28□□□□□ -1.56
MSH5-218ENST00000494646 COPS9Q8WXC6 57 aa5.28□□□□□ -1.56
MSH5-218ENST00000494646 PRO1933Q9H354 126 aa5.28□□□□□ -1.56
MSH5-218ENST00000494646 TRBV7-6A0A0J9YX20 115 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms