RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
COL1A1-208ENST00000494334 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
COL1A1-208ENST00000494334 LINC00518Q8N0U6 118 aa8.09□□□□□ -1.11
COL1A1-208ENST00000494334 PAM16Q9Y3D7 125 aa8.09□□□□□ -1.11
COL1A1-208ENST00000494334 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
COL1A1-208ENST00000494334 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
COL1A1-208ENST00000494334 PYY3Q5JQD4 70 aa8.08□□□□□ -1.12
COL1A1-208ENST00000494334 OR13C6PQ8NH95 151 aa8.08□□□□□ -1.12
COL1A1-208ENST00000494334 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
COL1A1-208ENST00000494334 B5MCH6 92 aa8.07□□□□□ -1.12
COL1A1-208ENST00000494334 DLEU1O43261 78 aa8.07□□□□□ -1.12
COL1A1-208ENST00000494334 C14orf144Q96I85 54 aa8.07□□□□□ -1.12
COL1A1-208ENST00000494334 VAMP8Q9BV40 100 aa8.07□□□□□ -1.12
COL1A1-208ENST00000494334 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
COL1A1-208ENST00000494334 ANAPC11Q9NYG5 84 aa8.06□□□□□ -1.12
COL1A1-208ENST00000494334 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
COL1A1-208ENST00000494334 CBY1Q9Y3M2 126 aa8.05□□□□□ -1.12
COL1A1-208ENST00000494334 A0A087X002 238 aa8.04□□□□□ -1.12
COL1A1-208ENST00000494334 RPL13AP40429 203 aaKnown RBP8.03□□□□□ -1.12
COL1A1-208ENST00000494334 Q6ZRX8 168 aa8.03□□□□□ -1.12
COL1A1-208ENST00000494334 Q9BRP9 147 aa8.03□□□□□ -1.12
COL1A1-208ENST00000494334 A6NDN8 102 aa8.02□□□□□ -1.13
COL1A1-208ENST00000494334 CRYGAP11844 174 aa8.02□□□□□ -1.13
COL1A1-208ENST00000494334 SLC25A34Q6PIV7 304 aa8.02□□□□□ -1.13
COL1A1-208ENST00000494334 A4D1N5 150 aa8.01□□□□□ -1.13
COL1A1-208ENST00000494334 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
COL1A1-208ENST00000494334 HINT1P49773 126 aaPredicted RBP8.01□□□□□ -1.13
COL1A1-208ENST00000494334 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
COL1A1-208ENST00000494334 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
COL1A1-208ENST00000494334 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
COL1A1-208ENST00000494334 TRAV13-2A0A0B4J235 113 aa8□□□□□ -1.13
COL1A1-208ENST00000494334 HIGD1BQ9P298 99 aa8□□□□□ -1.13
COL1A1-208ENST00000494334 C6orf99Q4VX62 202 aa7.99□□□□□ -1.13
COL1A1-208ENST00000494334 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
COL1A1-208ENST00000494334 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
COL1A1-208ENST00000494334 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
COL1A1-208ENST00000494334 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
COL1A1-208ENST00000494334 HMCN2Q8NDA2 5059 aa7.98□□□□□ -1.13
COL1A1-208ENST00000494334 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
COL1A1-208ENST00000494334 COX7BP24311 80 aa7.96□□□□□ -1.14
COL1A1-208ENST00000494334 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
COL1A1-208ENST00000494334 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
COL1A1-208ENST00000494334 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
COL1A1-208ENST00000494334 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
COL1A1-208ENST00000494334 C12orf57Q99622 126 aa7.95□□□□□ -1.14
COL1A1-208ENST00000494334 C3orf22Q8N5N4 141 aa7.94□□□□□ -1.14
COL1A1-208ENST00000494334 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
COL1A1-208ENST00000494334 A0A1B0GWB2 263 aa7.93□□□□□ -1.14
COL1A1-208ENST00000494334 TAL2Q16559 108 aa7.93□□□□□ -1.14
COL1A1-208ENST00000494334 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
COL1A1-208ENST00000494334 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
COL1A1-208ENST00000494334 CFC1P0CG37 223 aa7.92□□□□□ -1.14
COL1A1-208ENST00000494334 CEND1Q8N111 149 aa7.92□□□□□ -1.14
COL1A1-208ENST00000494334 UQCR10Q9UDW1 63 aa7.9□□□□□ -1.14
COL1A1-208ENST00000494334 A0A0B4J2C4 111 aa7.88□□□□□ -1.15
COL1A1-208ENST00000494334 TSPAN13O95857 204 aa7.88□□□□□ -1.15
COL1A1-208ENST00000494334 FXYD2P54710 66 aa7.88□□□□□ -1.15
COL1A1-208ENST00000494334 LINC00304Q8N9R0 145 aa7.88□□□□□ -1.15
COL1A1-208ENST00000494334 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
COL1A1-208ENST00000494334 SPRR1BP22528 89 aa7.87□□□□□ -1.15
COL1A1-208ENST00000494334 VAMP3Q15836 100 aa7.87□□□□□ -1.15
COL1A1-208ENST00000494334 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
COL1A1-208ENST00000494334 HSD52Q0P140 79 aa7.86□□□□□ -1.15
COL1A1-208ENST00000494334 TMEM238LA0A1B0GVL6 79 aa7.85□□□□□ -1.15
COL1A1-208ENST00000494334 A6NJY4 79 aa7.85□□□□□ -1.15
COL1A1-208ENST00000494334 H7C2G1 150 aa7.85□□□□□ -1.15
COL1A1-208ENST00000494334 NHP2Q9NX24 153 aaKnown RBP7.85□□□□□ -1.15
COL1A1-208ENST00000494334 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 SMIM6P0DI80 62 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 MOBPQ13875 183 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 LINC00575Q6W349 94 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 Q8NBF4 154 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 DEFB105AQ8NG35 78 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 PRO1933Q9H354 126 aa7.84□□□□□ -1.15
COL1A1-208ENST00000494334 LINC01547P58512 204 aaPredicted RBP7.83□□□□□ -1.16
COL1A1-208ENST00000494334 BVES-AS1Q5T3Y7 98 aa7.83□□□□□ -1.16
COL1A1-208ENST00000494334 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
COL1A1-208ENST00000494334 TEX49A0A1B0GTD5 131 aa7.82□□□□□ -1.16
COL1A1-208ENST00000494334 SLC25A20O43772 301 aa7.82□□□□□ -1.16
COL1A1-208ENST00000494334 SPAG11AQ6PDA7 123 aa7.82□□□□□ -1.16
COL1A1-208ENST00000494334 IGLV5-48A0A075B6I7 105 aa7.81□□□□□ -1.16
COL1A1-208ENST00000494334 hADV29S1A0JD25 119 aa7.81□□□□□ -1.16
COL1A1-208ENST00000494334 CTAG1AP78358 180 aa7.81□□□□□ -1.16
COL1A1-208ENST00000494334 C9orf153Q5TBE3 101 aa7.81□□□□□ -1.16
COL1A1-208ENST00000494334 LAMTOR3Q9UHA4 124 aa7.81□□□□□ -1.16
COL1A1-208ENST00000494334 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
COL1A1-208ENST00000494334 SMIM29Q86T20 159 aa7.8□□□□□ -1.16
COL1A1-208ENST00000494334 Q1RN00 199 aa7.79□□□□□ -1.16
COL1A1-208ENST00000494334 Q8N377 158 aa7.79□□□□□ -1.16
COL1A1-208ENST00000494334 K7ERJ3 54 aa7.78□□□□□ -1.16
COL1A1-208ENST00000494334 Q6ZQY7 126 aa7.78□□□□□ -1.16
COL1A1-208ENST00000494334 H0YGX0 51 aa7.77□□□□□ -1.17
COL1A1-208ENST00000494334 LRP2P98164 4655 aa7.77□□□□□ -1.17
COL1A1-208ENST00000494334 PRR4Q16378 134 aa7.77□□□□□ -1.17
COL1A1-208ENST00000494334 LPAP08519 4548 aa7.77□□□□□ -1.17
COL1A1-208ENST00000494334 SPINK1P00995 79 aa7.76□□□□□ -1.17
COL1A1-208ENST00000494334 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.76□□□□□ -1.17
COL1A1-208ENST00000494334 RETNLBQ9BQ08 111 aa7.76□□□□□ -1.17
COL1A1-208ENST00000494334 FAM218AQ96MZ4 157 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms