RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SPRR1AP35321 89 aa7.53□□□□□ -1.2
TRA2A-209ENST00000494255 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
TRA2A-209ENST00000494255 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
TRA2A-209ENST00000494255 TRAV23DV6A0A075B6W5 121 aa7.52□□□□□ -1.21
TRA2A-209ENST00000494255 SLC25A34Q6PIV7 304 aa7.51□□□□□ -1.21
TRA2A-209ENST00000494255 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
TRA2A-209ENST00000494255 HIST1H4GQ99525 98 aa7.51□□□□□ -1.21
TRA2A-209ENST00000494255 ZNF73O43830 326 aaPredicted RBP7.5□□□□□ -1.21
TRA2A-209ENST00000494255 KRTAP4-16G5E9R7 235 aaPredicted RBP7.49□□□□□ -1.21
TRA2A-209ENST00000494255 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
TRA2A-209ENST00000494255 HINT1P49773 126 aaPredicted RBP7.49□□□□□ -1.21
TRA2A-209ENST00000494255 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
TRA2A-209ENST00000494255 A6NDN8 102 aa7.48□□□□□ -1.21
TRA2A-209ENST00000494255 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
TRA2A-209ENST00000494255 TRAV13-2A0A0B4J235 113 aa7.47□□□□□ -1.21
TRA2A-209ENST00000494255 B5MCH6 92 aa7.47□□□□□ -1.21
TRA2A-209ENST00000494255 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
TRA2A-209ENST00000494255 DMBT1Q9UGM3 2413 aaPredicted RBP7.47□□□□□ -1.21
TRA2A-209ENST00000494255 Q6ZRX8 168 aa7.47□□□□□ -1.21
TRA2A-209ENST00000494255 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
TRA2A-209ENST00000494255 A4D1N5 150 aa7.46□□□□□ -1.22
TRA2A-209ENST00000494255 RPL13AP40429 203 aaKnown RBP7.46□□□□□ -1.22
TRA2A-209ENST00000494255 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
TRA2A-209ENST00000494255 ZNF706Q9Y5V0 76 aaPredicted RBP7.46□□□□□ -1.22
TRA2A-209ENST00000494255 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
TRA2A-209ENST00000494255 C2orf91Q6ZV80 131 aa7.44□□□□□ -1.22
TRA2A-209ENST00000494255 CRYGAP11844 174 aa7.44□□□□□ -1.22
TRA2A-209ENST00000494255 LRP1Q07954 4544 aaKnown RBP7.44□□□□□ -1.22
TRA2A-209ENST00000494255 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
TRA2A-209ENST00000494255 FAM229BQ4G0N7 80 aa7.43□□□□□ -1.22
TRA2A-209ENST00000494255 C6orf99Q4VX62 202 aa7.43□□□□□ -1.22
TRA2A-209ENST00000494255 Q9BRP9 147 aa7.43□□□□□ -1.22
TRA2A-209ENST00000494255 COX7BP24311 80 aa7.42□□□□□ -1.22
TRA2A-209ENST00000494255 TAL2Q16559 108 aa7.42□□□□□ -1.22
TRA2A-209ENST00000494255 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
TRA2A-209ENST00000494255 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
TRA2A-209ENST00000494255 C12orf57Q99622 126 aa7.41□□□□□ -1.22
TRA2A-209ENST00000494255 A0A087X002 238 aa7.41□□□□□ -1.22
TRA2A-209ENST00000494255 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
TRA2A-209ENST00000494255 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
TRA2A-209ENST00000494255 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
TRA2A-209ENST00000494255 UQCR10Q9UDW1 63 aa7.41□□□□□ -1.22
TRA2A-209ENST00000494255 ERC2-IT1O76042 136 aa7.4□□□□□ -1.23
TRA2A-209ENST00000494255 SMIM11BQ8TCY0 68 aa7.4□□□□□ -1.23
TRA2A-209ENST00000494255 CEND1Q8N111 149 aa7.39□□□□□ -1.23
TRA2A-209ENST00000494255 TYMSOSQ8TAI1 123 aa7.39□□□□□ -1.23
TRA2A-209ENST00000494255 TMEM238LA0A1B0GVL6 79 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 A6NJY4 79 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 SMIM6P0DI80 62 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 RAB37Q96AX2 223 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 HSD52Q0P140 79 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 VAMP3Q15836 100 aa7.38□□□□□ -1.23
TRA2A-209ENST00000494255 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
TRA2A-209ENST00000494255 CFC1P0CG37 223 aa7.37□□□□□ -1.23
TRA2A-209ENST00000494255 A0A0B4J2C4 111 aa7.36□□□□□ -1.23
TRA2A-209ENST00000494255 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
TRA2A-209ENST00000494255 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
TRA2A-209ENST00000494255 H7C2G1 150 aa7.35□□□□□ -1.23
TRA2A-209ENST00000494255 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
TRA2A-209ENST00000494255 LOC105371267A0A1B0GV96 52 aa7.34□□□□□ -1.23
TRA2A-209ENST00000494255 SLC25A20O43772 301 aa7.34□□□□□ -1.23
TRA2A-209ENST00000494255 FXYD2P54710 66 aa7.34□□□□□ -1.23
TRA2A-209ENST00000494255 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
TRA2A-209ENST00000494255 ST20-AS1Q8NBB2 130 aa7.34□□□□□ -1.23
TRA2A-209ENST00000494255 PRO1933Q9H354 126 aa7.34□□□□□ -1.23
TRA2A-209ENST00000494255 BVES-AS1Q5T3Y7 98 aa7.32□□□□□ -1.24
TRA2A-209ENST00000494255 Q1RN00 199 aa7.32□□□□□ -1.24
TRA2A-209ENST00000494255 PRO1854Q9UHT4 67 aa7.32□□□□□ -1.24
TRA2A-209ENST00000494255 IGLV9-49A0A0B4J1Y8 123 aa7.31□□□□□ -1.24
TRA2A-209ENST00000494255 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
TRA2A-209ENST00000494255 TNXBP22105 4242 aa7.31□□□□□ -1.24
TRA2A-209ENST00000494255 LINC00575Q6W349 94 aa7.3□□□□□ -1.24
TRA2A-209ENST00000494255 SPRR1BP22528 89 aa7.29□□□□□ -1.24
TRA2A-209ENST00000494255 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
TRA2A-209ENST00000494255 hADV29S1A0JD25 119 aa7.28□□□□□ -1.24
TRA2A-209ENST00000494255 TSPAN13O95857 204 aa7.28□□□□□ -1.24
TRA2A-209ENST00000494255 MOBPQ13875 183 aa7.28□□□□□ -1.24
TRA2A-209ENST00000494255 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
TRA2A-209ENST00000494255 C9orf153Q5TBE3 101 aa7.28□□□□□ -1.24
TRA2A-209ENST00000494255 LAMTOR3Q9UHA4 124 aa7.28□□□□□ -1.24
TRA2A-209ENST00000494255 TSTD3H0UI37 97 aa7.27□□□□□ -1.25
TRA2A-209ENST00000494255 SNCGO76070 127 aa7.27□□□□□ -1.25
TRA2A-209ENST00000494255 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
TRA2A-209ENST00000494255 SSBP3-AS1Q7Z2R9 100 aa7.27□□□□□ -1.25
TRA2A-209ENST00000494255 Q8NBF4 154 aa7.27□□□□□ -1.25
TRA2A-209ENST00000494255 H0YGX0 51 aa7.26□□□□□ -1.25
TRA2A-209ENST00000494255 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
TRA2A-209ENST00000494255 HERC1Q15751 4861 aa7.26□□□□□ -1.25
TRA2A-209ENST00000494255 IGLV5-48A0A075B6I7 105 aa7.25□□□□□ -1.25
TRA2A-209ENST00000494255 K7ERJ3 54 aa7.25□□□□□ -1.25
TRA2A-209ENST00000494255 M0R143 59 aa7.25□□□□□ -1.25
TRA2A-209ENST00000494255 CTAG1AP78358 180 aa7.25□□□□□ -1.25
TRA2A-209ENST00000494255 Q6ZQY7 126 aa7.25□□□□□ -1.25
TRA2A-209ENST00000494255 PSMB2P49721 201 aa7.23□□□□□ -1.25
TRA2A-209ENST00000494255 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
TRA2A-209ENST00000494255 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
TRA2A-209ENST00000494255 TRIAP1O43715 76 aa7.22□□□□□ -1.25
TRA2A-209ENST00000494255 Q8N377 158 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms