RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
SATB1-217ENST00000493952 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
SATB1-217ENST00000493952 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
SATB1-217ENST00000493952 C5orf52A6NGY3 159 aa9.46□□□□□ -0.9
SATB1-217ENST00000493952 Q6ZRX8 168 aa9.46□□□□□ -0.9
SATB1-217ENST00000493952 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.9
SATB1-217ENST00000493952 Q9BRP9 147 aa9.45□□□□□ -0.9
SATB1-217ENST00000493952 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
SATB1-217ENST00000493952 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
SATB1-217ENST00000493952 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
SATB1-217ENST00000493952 ERC2-IT1O76042 136 aa9.43□□□□□ -0.9
SATB1-217ENST00000493952 TSPAN13O95857 204 aa9.43□□□□□ -0.9
SATB1-217ENST00000493952 LRP2P98164 4655 aa9.43□□□□□ -0.9
SATB1-217ENST00000493952 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
SATB1-217ENST00000493952 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
SATB1-217ENST00000493952 SCGB1D1O95968 90 aa9.41□□□□□ -0.9
SATB1-217ENST00000493952 IFITM1P13164 125 aa9.41□□□□□ -0.9
SATB1-217ENST00000493952 Q6ZVH6 145 aa9.41□□□□□ -0.9
SATB1-217ENST00000493952 LINC00518Q8N0U6 118 aa9.41□□□□□ -0.9
SATB1-217ENST00000493952 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
SATB1-217ENST00000493952 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
SATB1-217ENST00000493952 MUSTN1Q8IVN3 82 aa9.4□□□□□ -0.9
SATB1-217ENST00000493952 COPS9Q8WXC6 57 aa9.4□□□□□ -0.9
SATB1-217ENST00000493952 UBR4Q5T4S7 5183 aa9.39□□□□□ -0.91
SATB1-217ENST00000493952 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
SATB1-217ENST00000493952 LINC00483Q53H64 154 aa9.39□□□□□ -0.91
SATB1-217ENST00000493952 LPAP08519 4548 aa9.39□□□□□ -0.91
SATB1-217ENST00000493952 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
SATB1-217ENST00000493952 HINT1P49773 126 aaPredicted RBP9.36□□□□□ -0.91
SATB1-217ENST00000493952 PRR4Q16378 134 aa9.36□□□□□ -0.91
SATB1-217ENST00000493952 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
SATB1-217ENST00000493952 A6NDN8 102 aa9.33□□□□□ -0.92
SATB1-217ENST00000493952 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
SATB1-217ENST00000493952 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
SATB1-217ENST00000493952 COX7BP24311 80 aa9.32□□□□□ -0.92
SATB1-217ENST00000493952 Q8NBF4 154 aa9.32□□□□□ -0.92
SATB1-217ENST00000493952 COX8AP10176 69 aa9.31□□□□□ -0.92
SATB1-217ENST00000493952 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
SATB1-217ENST00000493952 IGLV9-49A0A0B4J1Y8 123 aa9.3□□□□□ -0.92
SATB1-217ENST00000493952 MOBPQ13875 183 aa9.3□□□□□ -0.92
SATB1-217ENST00000493952 DHRS4-AS1Q9P1J3 65 aa9.3□□□□□ -0.92
SATB1-217ENST00000493952 CTAG1AP78358 180 aa9.29□□□□□ -0.92
SATB1-217ENST00000493952 SPAG11AQ6PDA7 123 aa9.29□□□□□ -0.92
SATB1-217ENST00000493952 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
SATB1-217ENST00000493952 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
SATB1-217ENST00000493952 A4D1N5 150 aa9.28□□□□□ -0.92
SATB1-217ENST00000493952 A0A1B0GWB2 263 aa9.27□□□□□ -0.93
SATB1-217ENST00000493952 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
SATB1-217ENST00000493952 DLEU1O43261 78 aa9.26□□□□□ -0.93
SATB1-217ENST00000493952 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
SATB1-217ENST00000493952 C4orf48Q5BLP8 95 aa9.26□□□□□ -0.93
SATB1-217ENST00000493952 SMIM11BQ8TCY0 68 aa9.26□□□□□ -0.93
SATB1-217ENST00000493952 SPRR1BP22528 89 aa9.25□□□□□ -0.93
SATB1-217ENST00000493952 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
SATB1-217ENST00000493952 C14orf144Q96I85 54 aa9.25□□□□□ -0.93
SATB1-217ENST00000493952 C9orf153Q5TBE3 101 aa9.24□□□□□ -0.93
SATB1-217ENST00000493952 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
SATB1-217ENST00000493952 VAMP8Q9BV40 100 aa9.24□□□□□ -0.93
SATB1-217ENST00000493952 SPINK1P00995 79 aa9.22□□□□□ -0.93
SATB1-217ENST00000493952 C12orf57Q99622 126 aa9.22□□□□□ -0.93
SATB1-217ENST00000493952 TMA7Q9Y2S6 64 aaKnown RBP9.21□□□□□ -0.94
SATB1-217ENST00000493952 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
SATB1-217ENST00000493952 HIGD1BQ9P298 99 aa9.2□□□□□ -0.94
SATB1-217ENST00000493952 TAL2Q16559 108 aa9.19□□□□□ -0.94
SATB1-217ENST00000493952 PYY3Q5JQD4 70 aa9.19□□□□□ -0.94
SATB1-217ENST00000493952 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
SATB1-217ENST00000493952 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
SATB1-217ENST00000493952 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
SATB1-217ENST00000493952 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
SATB1-217ENST00000493952 LINC01547P58512 204 aaPredicted RBP9.18□□□□□ -0.94
SATB1-217ENST00000493952 LAMTOR3Q9UHA4 124 aa9.18□□□□□ -0.94
SATB1-217ENST00000493952 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
SATB1-217ENST00000493952 Q1RN00 199 aa9.17□□□□□ -0.94
SATB1-217ENST00000493952 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
SATB1-217ENST00000493952 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
SATB1-217ENST00000493952 VAMP3Q15836 100 aa9.15□□□□□ -0.94
SATB1-217ENST00000493952 TPRXLQ17RH7 258 aa9.15□□□□□ -0.94
SATB1-217ENST00000493952 SMIM29Q86T20 159 aa9.15□□□□□ -0.94
SATB1-217ENST00000493952 Q8N377 158 aa9.15□□□□□ -0.94
SATB1-217ENST00000493952 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
SATB1-217ENST00000493952 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
SATB1-217ENST00000493952 SLC25A20O43772 301 aa9.12□□□□□ -0.95
SATB1-217ENST00000493952 CFC1BP0CG36 223 aa9.12□□□□□ -0.95
SATB1-217ENST00000493952 CFC1P0CG37 223 aa9.12□□□□□ -0.95
SATB1-217ENST00000493952 A0A0B4J2C4 111 aa9.1□□□□□ -0.95
SATB1-217ENST00000493952 H7C2G1 150 aa9.1□□□□□ -0.95
SATB1-217ENST00000493952 HRCT1Q6UXD1 115 aa9.1□□□□□ -0.95
SATB1-217ENST00000493952 CEND1Q8N111 149 aa9.1□□□□□ -0.95
SATB1-217ENST00000493952 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
SATB1-217ENST00000493952 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
SATB1-217ENST00000493952 hADV29S1A0JD25 119 aa9.09□□□□□ -0.95
SATB1-217ENST00000493952 BVES-AS1Q5T3Y7 98 aa9.09□□□□□ -0.95
SATB1-217ENST00000493952 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
SATB1-217ENST00000493952 Q6ZQY7 126 aa9.08□□□□□ -0.96
SATB1-217ENST00000493952 PRO1933Q9H354 126 aa9.08□□□□□ -0.96
SATB1-217ENST00000493952 FXYD2P54710 66 aa9.06□□□□□ -0.96
SATB1-217ENST00000493952 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
SATB1-217ENST00000493952 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
SATB1-217ENST00000493952 CD164Q04900 197 aa9.05□□□□□ -0.96
SATB1-217ENST00000493952 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms