RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RPL37AP61513 92 aaKnown RBP1.66□□□□□ -2.14
GTF3A-208ENST00000493903 DEFB135Q30KP9 77 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 DEFB114Q30KQ6 69 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 PIGYQ3MUY2 71 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 FAM103A1Q9BTL3 118 aaKnown RBP1.66□□□□□ -2.14
GTF3A-208ENST00000493903 TMEM242Q9NWH2 141 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 NDUFA12Q9UI09 145 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 FLG2Q5D862 2391 aaPredicted RBP1.65□□□□□ -2.14
GTF3A-208ENST00000493903 FAT4Q6V0I7 4981 aa1.65□□□□□ -2.14
GTF3A-208ENST00000493903 DNAH8Q96JB1 4490 aa1.65□□□□□ -2.14
GTF3A-208ENST00000493903 LOC100130705A0A1B0GUX0 176 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 NDUFB6O95139 128 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 SAA2P0DJI9 122 aaPredicted RBP1.65□□□□□ -2.15
GTF3A-208ENST00000493903 S100A1P23297 94 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 S100PP25815 95 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 MRPS10P82664 201 aaKnown RBP1.65□□□□□ -2.15
GTF3A-208ENST00000493903 TMEM141Q96I45 108 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 SEC11CQ9BY50 192 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 GNG8Q9UK08 70 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 FAT3Q8TDW7 4589 aa1.65□□□□□ -2.15
GTF3A-208ENST00000493903 SRRM2Q9UQ35 2752 aaKnown RBP1.64□□□□□ -2.15
GTF3A-208ENST00000493903 F6UZH7 168 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 HIST1H1DP16402 221 aaKnown RBP1.64□□□□□ -2.15
GTF3A-208ENST00000493903 FXYD4P59646 89 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 IQCJQ1A5X6 159 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 RPL39P5Q59GN2 51 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 SCN3BQ9NY72 215 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 SERP1Q9Y6X1 66 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 TNXBP22105 4242 aa1.64□□□□□ -2.15
GTF3A-208ENST00000493903 LRP1Q07954 4544 aaKnown RBP1.63□□□□□ -2.15
GTF3A-208ENST00000493903 FAM223BA6NKX1 122 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 CORTO00230 105 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 DEFB4AO15263 64 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 PRH1P02810 166 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 ANGP03950 147 aaKnown RBP1.63□□□□□ -2.15
GTF3A-208ENST00000493903 CCKP06307 115 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 CBLN1P23435 193 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 FXYD3Q14802 87 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 HMGN3Q15651 99 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 KLK9Q2XQG4 91 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 C12orf73Q69YU5 71 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 Q6AWC8 147 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 FAM223AQ8IWN6 122 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 USMG5Q96IX5 58 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 LRP2P98164 4655 aa1.63□□□□□ -2.15
GTF3A-208ENST00000493903 SNCGO76070 127 aa1.62□□□□□ -2.15
GTF3A-208ENST00000493903 APELAP0DMC3 54 aa1.62□□□□□ -2.15
GTF3A-208ENST00000493903 PLGLAQ15195 96 aa1.62□□□□□ -2.15
GTF3A-208ENST00000493903 Q56UQ5 140 aa1.62□□□□□ -2.15
GTF3A-208ENST00000493903 XAF1Q6GPH4 301 aa1.62□□□□□ -2.15
GTF3A-208ENST00000493903 COA4Q9NYJ1 87 aa1.62□□□□□ -2.15
GTF3A-208ENST00000493903 TEX49A0A1B0GTD5 131 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 MCRIP1C9JLW8 97 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 PRB4P10163 310 aaPredicted RBP1.61□□□□□ -2.15
GTF3A-208ENST00000493903 GNG4P50150 75 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 DEFB107AQ8IZN7 70 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 TTC9CQ8N5M4 171 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 SPANXDQ9BXN6 97 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
GTF3A-208ENST00000493903 DEFB131BA0A096LNP1 70 aa1.6□□□□□ -2.15
GTF3A-208ENST00000493903 NCR3O14931 201 aa1.6□□□□□ -2.15
GTF3A-208ENST00000493903 C9orf116Q5BN46 136 aaPredicted RBP1.6□□□□□ -2.15
GTF3A-208ENST00000493903 Q5VSD8 79 aa1.6□□□□□ -2.15
GTF3A-208ENST00000493903 RPL7L1Q6DKI1 246 aaKnown RBP1.6□□□□□ -2.15
GTF3A-208ENST00000493903 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
GTF3A-208ENST00000493903 TCEAL7Q9BRU2 100 aa1.6□□□□□ -2.15
GTF3A-208ENST00000493903 TRBV7-1A0A0A6YYK4 115 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 PIGBOS1A0A0B4J2F0 54 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 NBDYA0A0U1RRE5 68 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 GNGT2O14610 69 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 PPP3R1P63098 170 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 Q6ZQY7 126 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 Q6ZSA8 131 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 C6orf201Q7Z4U5 140 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 UBE2DNLQ8IWF7 75 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 TMEM167AQ8TBQ9 72 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 TSKUQ8WUA8 353 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 LSM10Q969L4 123 aaKnown RBP1.59□□□□□ -2.15
GTF3A-208ENST00000493903 IFI27L1Q96BM0 104 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 RPRMQ9NS64 109 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 ABRACLQ9P1F3 81 aa1.59□□□□□ -2.15
GTF3A-208ENST00000493903 MUC2Q02817 5179 aa1.59□□□□□ -2.16
GTF3A-208ENST00000493903 LOC101927531A0A1B0GV80 90 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 TCRBV3S1A0A5B6 114 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 IGLC7A0M8Q6 106 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 NDUFA4O00483 81 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 IFNA17P01571 189 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 SNRPGP62308 76 aaKnown RBP1.58□□□□□ -2.16
GTF3A-208ENST00000493903 ACBD7Q8N6N7 88 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 S100A13Q99584 98 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 RHPN1-AS1Q9BWJ2 59 aa1.58□□□□□ -2.16
GTF3A-208ENST00000493903 TRAV12-3A0A0B4J271 114 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 TMEM14DPA8MWL7 114 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 K7EIM0 57 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 SNAPC5O75971 98 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 DEFB131AP59861 70 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 UBE2G1P62253 170 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms