RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GVQW2A0A096LPI5 108 aaPredicted RBP9.18□□□□□ -0.94
VCP-207ENST00000493886 TRAV10A0A0B4J240 114 aa9.18□□□□□ -0.94
VCP-207ENST00000493886 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
VCP-207ENST00000493886 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
VCP-207ENST00000493886 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
VCP-207ENST00000493886 NBEAL1Q6ZS30 2694 aa9.16□□□□□ -0.94
VCP-207ENST00000493886 F8WEM9 126 aa9.15□□□□□ -0.94
VCP-207ENST00000493886 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
VCP-207ENST00000493886 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
VCP-207ENST00000493886 RMI2Q96E14 147 aa9.14□□□□□ -0.95
VCP-207ENST00000493886 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
VCP-207ENST00000493886 Q6JHZ5 121 aa9.14□□□□□ -0.95
VCP-207ENST00000493886 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
VCP-207ENST00000493886 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
VCP-207ENST00000493886 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
VCP-207ENST00000493886 LINC00167Q96N53 147 aa9.11□□□□□ -0.95
VCP-207ENST00000493886 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
VCP-207ENST00000493886 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
VCP-207ENST00000493886 JMJD7-PLA2G4BH0Y9G9 81 aa9.1□□□□□ -0.95
VCP-207ENST00000493886 HUWE1Q7Z6Z7 4374 aaKnown RBP9.1□□□□□ -0.95
VCP-207ENST00000493886 MGAM2Q2M2H8 2515 aa9.1□□□□□ -0.95
VCP-207ENST00000493886 M0R2N4 97 aa9.1□□□□□ -0.95
VCP-207ENST00000493886 LINC00575Q6W349 94 aa9.09□□□□□ -0.95
VCP-207ENST00000493886 Q6ZQY7 126 aa9.08□□□□□ -0.96
VCP-207ENST00000493886 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
VCP-207ENST00000493886 IGLV6-57P01721 117 aa9.08□□□□□ -0.96
VCP-207ENST00000493886 MDFIQ99750 246 aa9.06□□□□□ -0.96
VCP-207ENST00000493886 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
VCP-207ENST00000493886 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
VCP-207ENST00000493886 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
VCP-207ENST00000493886 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
VCP-207ENST00000493886 A8MU10 97 aa9.03□□□□□ -0.96
VCP-207ENST00000493886 VPREB1P12018 145 aa9.03□□□□□ -0.96
VCP-207ENST00000493886 Q6ZQT0 140 aa9.02□□□□□ -0.96
VCP-207ENST00000493886 HAMPP81172 84 aa9.02□□□□□ -0.97
VCP-207ENST00000493886 Q6ZRP5 223 aa9.02□□□□□ -0.97
VCP-207ENST00000493886 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
VCP-207ENST00000493886 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
VCP-207ENST00000493886 DIRC1Q969H9 104 aa9.01□□□□□ -0.97
VCP-207ENST00000493886 KLKP1Q107X0 134 aa9□□□□□ -0.97
VCP-207ENST00000493886 CASC10Q5T4H9 136 aa9□□□□□ -0.97
VCP-207ENST00000493886 M0R378 163 aa8.99□□□□□ -0.97
VCP-207ENST00000493886 ZNF73O43830 326 aaPredicted RBP8.99□□□□□ -0.97
VCP-207ENST00000493886 SCXQ7RTU7 201 aa8.99□□□□□ -0.97
VCP-207ENST00000493886 PSPHP1O15172 72 aa8.99□□□□□ -0.97
VCP-207ENST00000493886 COX7BP24311 80 aa8.96□□□□□ -0.97
VCP-207ENST00000493886 ATP5EP2Q5VTU8 51 aa8.96□□□□□ -0.97
VCP-207ENST00000493886 Q6ZVQ6 151 aa8.96□□□□□ -0.97
VCP-207ENST00000493886 B9D2Q9BPU9 175 aa8.96□□□□□ -0.98
VCP-207ENST00000493886 TRAV7A0A075B6U4 112 aa8.95□□□□□ -0.98
VCP-207ENST00000493886 LINC01547P58512 204 aaPredicted RBP8.95□□□□□ -0.98
VCP-207ENST00000493886 STAB2Q8WWQ8 2551 aa8.95□□□□□ -0.98
VCP-207ENST00000493886 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
VCP-207ENST00000493886 DNAH9Q9NYC9 4486 aa8.94□□□□□ -0.98
VCP-207ENST00000493886 DNAH1Q9P2D7 4330 aa8.94□□□□□ -0.98
VCP-207ENST00000493886 LOC110117498A0A087WWA1 95 aa8.94□□□□□ -0.98
VCP-207ENST00000493886 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
VCP-207ENST00000493886 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
VCP-207ENST00000493886 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
VCP-207ENST00000493886 NKAPP1Q8N9T2 125 aa8.92□□□□□ -0.98
VCP-207ENST00000493886 APLNQ9ULZ1 77 aa8.92□□□□□ -0.98
VCP-207ENST00000493886 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
VCP-207ENST00000493886 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
VCP-207ENST00000493886 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
VCP-207ENST00000493886 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.99
VCP-207ENST00000493886 PLA2G2DQ9UNK4 145 aa8.9□□□□□ -0.99
VCP-207ENST00000493886 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
VCP-207ENST00000493886 DEFB105AQ8NG35 78 aa8.89□□□□□ -0.99
VCP-207ENST00000493886 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
VCP-207ENST00000493886 H3BQ85 93 aa8.88□□□□□ -0.99
VCP-207ENST00000493886 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
VCP-207ENST00000493886 Q8N9L7 120 aa8.88□□□□□ -0.99
VCP-207ENST00000493886 KCNQ1DNQ9H478 68 aa8.88□□□□□ -0.99
VCP-207ENST00000493886 TRBV7-4A0A0J9YYF1 115 aa8.87□□□□□ -0.99
VCP-207ENST00000493886 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
VCP-207ENST00000493886 NDUFC1O43677 76 aa8.86□□□□□ -0.99
VCP-207ENST00000493886 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
VCP-207ENST00000493886 FUSP35637 526 aaKnown RBP eCLIP8.85□□□□□ -0.993e-7■■□□□ 13.8
VCP-207ENST00000493886 C3orf84H3BNL1 204 aa8.85□□□□□ -0.99
VCP-207ENST00000493886 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
VCP-207ENST00000493886 PSCAO43653 123 aa8.84□□□□□ -0.99
VCP-207ENST00000493886 PDE6GP18545 87 aa8.84□□□□□ -0.99
VCP-207ENST00000493886 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
VCP-207ENST00000493886 DYNC2H1Q8NCM8 4307 aaKnown RBP8.83□□□□□ -1
VCP-207ENST00000493886 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
VCP-207ENST00000493886 NUPR2A6NF83 97 aa8.82□□□□□ -1
VCP-207ENST00000493886 A8MUN3 132 aa8.82□□□□□ -1
VCP-207ENST00000493886 LYSTQ99698 3801 aa8.82□□□□□ -1
VCP-207ENST00000493886 PRYO14603 147 aa8.81□□□□□ -1
VCP-207ENST00000493886 CXCL6P80162 114 aa8.81□□□□□ -1
VCP-207ENST00000493886 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
VCP-207ENST00000493886 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
VCP-207ENST00000493886 BPY2O14599 106 aa8.79□□□□□ -1
VCP-207ENST00000493886 UBE2BP63146 152 aa8.79□□□□□ -1
VCP-207ENST00000493886 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
VCP-207ENST00000493886 DNAH10Q8IVF4 4471 aa8.78□□□□□ -1
VCP-207ENST00000493886 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
VCP-207ENST00000493886 SPRR1AP35321 89 aa8.78□□□□□ -1
VCP-207ENST00000493886 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
VCP-207ENST00000493886 NDUFS5O43920 106 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms