RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TIMM17BO60830 172 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 DDTP30046 118 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 FAM229BQ4G0N7 80 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 LINC00337Q8N6G1 96 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 HIGD2AQ9BW72 106 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
TOP3A-207ENST00000493648 TNXBP22105 4242 aa4.15□□□□□ -1.75
TOP3A-207ENST00000493648 SCGB1D1O95968 90 aa4.14□□□□□ -1.75
TOP3A-207ENST00000493648 SPRR1AP35321 89 aa4.14□□□□□ -1.75
TOP3A-207ENST00000493648 NPC2P61916 151 aa4.14□□□□□ -1.75
TOP3A-207ENST00000493648 JOSD1Q15040 202 aaPredicted RBP4.14□□□□□ -1.75
TOP3A-207ENST00000493648 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
TOP3A-207ENST00000493648 ANAPC11Q9NYG5 84 aa4.14□□□□□ -1.75
TOP3A-207ENST00000493648 CBY1Q9Y3M2 126 aa4.14□□□□□ -1.75
TOP3A-207ENST00000493648 A0A087X002 238 aa4.13□□□□□ -1.75
TOP3A-207ENST00000493648 PYY3Q5JQD4 70 aa4.13□□□□□ -1.75
TOP3A-207ENST00000493648 SCGB1D4Q6XE38 83 aa4.13□□□□□ -1.75
TOP3A-207ENST00000493648 LINC00308Q8TCZ7 52 aa4.13□□□□□ -1.75
TOP3A-207ENST00000493648 ZNF706Q9Y5V0 76 aaPredicted RBP4.13□□□□□ -1.75
TOP3A-207ENST00000493648 IGLV6-57P01721 117 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 SOSTDC1Q6X4U4 206 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 LINC00518Q8N0U6 118 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 ATOH7Q8N100 152 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 SMCR5Q8TEV8 140 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 LITAFQ99732 161 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 TTTY13Q9BZ97 58 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
TOP3A-207ENST00000493648 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 B5MCH6 92 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
TOP3A-207ENST00000493648 EIF4EBP3O60516 100 aaPredicted RBP4.11□□□□□ -1.75
TOP3A-207ENST00000493648 TSPAN13O95857 204 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 HINT1P49773 126 aaPredicted RBP4.11□□□□□ -1.75
TOP3A-207ENST00000493648 ANKRD39Q53RE8 183 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 OR13C6PQ8NH95 151 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
TOP3A-207ENST00000493648 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
TOP3A-207ENST00000493648 IFITM1P13164 125 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 Q6ZVH6 145 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
TOP3A-207ENST00000493648 Q6ZRX8 168 aa4.09□□□□□ -1.75
TOP3A-207ENST00000493648 PCP2Q8IVA1 136 aa4.09□□□□□ -1.75
TOP3A-207ENST00000493648 LINC00304Q8N9R0 145 aa4.09□□□□□ -1.75
TOP3A-207ENST00000493648 CTAG1AP78358 180 aa4.08□□□□□ -1.76
TOP3A-207ENST00000493648 PRR4Q16378 134 aa4.08□□□□□ -1.76
TOP3A-207ENST00000493648 GAGE2AQ6NT46 116 aa4.08□□□□□ -1.76
TOP3A-207ENST00000493648 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
TOP3A-207ENST00000493648 ERC2-IT1O76042 136 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 SMIM6P0DI80 62 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 MUSTN1Q8IVN3 82 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 C3orf22Q8N5N4 141 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 Q9BRP9 147 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 VAMP8Q9BV40 100 aa4.07□□□□□ -1.76
TOP3A-207ENST00000493648 A6NDN8 102 aa4.06□□□□□ -1.76
TOP3A-207ENST00000493648 SPATA45Q537H7 98 aa4.06□□□□□ -1.76
TOP3A-207ENST00000493648 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
TOP3A-207ENST00000493648 DHRS4-AS1Q9P1J3 65 aa4.06□□□□□ -1.76
TOP3A-207ENST00000493648 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
TOP3A-207ENST00000493648 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
TOP3A-207ENST00000493648 COX7BP24311 80 aa4.05□□□□□ -1.76
TOP3A-207ENST00000493648 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
TOP3A-207ENST00000493648 C14orf144Q96I85 54 aa4.05□□□□□ -1.76
TOP3A-207ENST00000493648 C12orf57Q99622 126 aa4.05□□□□□ -1.76
TOP3A-207ENST00000493648 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
TOP3A-207ENST00000493648 TRBV7-6A0A0J9YX20 115 aa4.04□□□□□ -1.76
TOP3A-207ENST00000493648 DLEU1O43261 78 aa4.04□□□□□ -1.76
TOP3A-207ENST00000493648 COX8AP10176 69 aa4.04□□□□□ -1.76
TOP3A-207ENST00000493648 C6orf99Q4VX62 202 aa4.04□□□□□ -1.76
TOP3A-207ENST00000493648 Q8NBF4 154 aa4.04□□□□□ -1.76
TOP3A-207ENST00000493648 SPINK1P00995 79 aa4.03□□□□□ -1.76
TOP3A-207ENST00000493648 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
TOP3A-207ENST00000493648 MOBPQ13875 183 aa4.03□□□□□ -1.76
TOP3A-207ENST00000493648 SLC25A34Q6PIV7 304 aa4.03□□□□□ -1.76
TOP3A-207ENST00000493648 ST20-AS1Q8NBB2 130 aa4.03□□□□□ -1.76
TOP3A-207ENST00000493648 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
TOP3A-207ENST00000493648 A0A1B0GWB2 263 aa4.02□□□□□ -1.77
TOP3A-207ENST00000493648 A4D1N5 150 aa4.02□□□□□ -1.77
TOP3A-207ENST00000493648 TAL2Q16559 108 aa4.02□□□□□ -1.77
TOP3A-207ENST00000493648 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
TOP3A-207ENST00000493648 PRO1933Q9H354 126 aa4.02□□□□□ -1.77
TOP3A-207ENST00000493648 SPRR1BP22528 89 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 VAMP3Q15836 100 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 DEFB105AQ8NG35 78 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 LAMTOR3Q9UHA4 124 aa4.01□□□□□ -1.77
TOP3A-207ENST00000493648 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
TOP3A-207ENST00000493648 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
TOP3A-207ENST00000493648 NHP2Q9NX24 153 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms