RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 NDUFC2O95298 119 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 S100A12P80511 92 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 LINC00337Q8N6G1 96 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
SGIP1-213ENST00000493564 B5MCH6 92 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 S100A6P06703 90 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 FAM229BQ4G0N7 80 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 PCP2Q8IVA1 136 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 C3orf22Q8N5N4 141 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
SGIP1-213ENST00000493564 TIMM17BO60830 172 aa5.52□□□□□ -1.53
SGIP1-213ENST00000493564 ERC2-IT1O76042 136 aa5.52□□□□□ -1.53
SGIP1-213ENST00000493564 SNRPEP62304 92 aaKnown RBP5.52□□□□□ -1.53
SGIP1-213ENST00000493564 PRR4Q16378 134 aa5.52□□□□□ -1.53
SGIP1-213ENST00000493564 SCGB1D4Q6XE38 83 aa5.52□□□□□ -1.53
SGIP1-213ENST00000493564 TRAV23DV6A0A075B6W5 121 aa5.51□□□□□ -1.53
SGIP1-213ENST00000493564 GAGE2AQ6NT46 116 aa5.51□□□□□ -1.53
SGIP1-213ENST00000493564 Q9BRP9 147 aa5.51□□□□□ -1.53
SGIP1-213ENST00000493564 SPANXCQ9NY87 97 aa5.51□□□□□ -1.53
SGIP1-213ENST00000493564 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
SGIP1-213ENST00000493564 ZNF73O43830 326 aaPredicted RBP5.49□□□□□ -1.53
SGIP1-213ENST00000493564 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
SGIP1-213ENST00000493564 ZNF706Q9Y5V0 76 aaPredicted RBP5.49□□□□□ -1.53
SGIP1-213ENST00000493564 SCGB1D1O95968 90 aa5.48□□□□□ -1.53
SGIP1-213ENST00000493564 Q6ZRX8 168 aa5.48□□□□□ -1.53
SGIP1-213ENST00000493564 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
SGIP1-213ENST00000493564 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
SGIP1-213ENST00000493564 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
SGIP1-213ENST00000493564 AKR1D1P51857 326 aa5.47□□□□□ -1.53
SGIP1-213ENST00000493564 LINC00518Q8N0U6 118 aa5.47□□□□□ -1.53
SGIP1-213ENST00000493564 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
SGIP1-213ENST00000493564 C5orf52A6NGY3 159 aa5.46□□□□□ -1.54
SGIP1-213ENST00000493564 HSBP1L1C9JCN9 74 aa5.46□□□□□ -1.54
SGIP1-213ENST00000493564 HINT1P49773 126 aaPredicted RBP5.46□□□□□ -1.54
SGIP1-213ENST00000493564 A6NDN8 102 aa5.45□□□□□ -1.54
SGIP1-213ENST00000493564 IFITM1P13164 125 aa5.45□□□□□ -1.54
SGIP1-213ENST00000493564 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
SGIP1-213ENST00000493564 Q8NBF4 154 aa5.45□□□□□ -1.54
SGIP1-213ENST00000493564 C6orf99Q4VX62 202 aa5.44□□□□□ -1.54
SGIP1-213ENST00000493564 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
SGIP1-213ENST00000493564 COX7BP24311 80 aa5.43□□□□□ -1.54
SGIP1-213ENST00000493564 MOBPQ13875 183 aa5.43□□□□□ -1.54
SGIP1-213ENST00000493564 Q6ZVH6 145 aa5.43□□□□□ -1.54
SGIP1-213ENST00000493564 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
SGIP1-213ENST00000493564 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
SGIP1-213ENST00000493564 CBY1Q9Y3M2 126 aa5.43□□□□□ -1.54
SGIP1-213ENST00000493564 C9orf153Q5TBE3 101 aa5.41□□□□□ -1.54
SGIP1-213ENST00000493564 SPAG11AQ6PDA7 123 aa5.41□□□□□ -1.54
SGIP1-213ENST00000493564 DEFB105AQ8NG35 78 aa5.41□□□□□ -1.54
SGIP1-213ENST00000493564 DHRS4-AS1Q9P1J3 65 aa5.41□□□□□ -1.54
SGIP1-213ENST00000493564 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
SGIP1-213ENST00000493564 LOC105371267A0A1B0GV96 52 aa5.4□□□□□ -1.54
SGIP1-213ENST00000493564 ELOF1P60002 83 aaKnown RBP5.4□□□□□ -1.54
SGIP1-213ENST00000493564 C14orf144Q96I85 54 aa5.4□□□□□ -1.54
SGIP1-213ENST00000493564 IGLV7-46A0A075B6I9 117 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 A4D1N5 150 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 SSBP3-AS1Q7Z2R9 100 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 SMIM11BQ8TCY0 68 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
SGIP1-213ENST00000493564 COX8AP10176 69 aa5.38□□□□□ -1.55
SGIP1-213ENST00000493564 TAL2Q16559 108 aa5.38□□□□□ -1.55
SGIP1-213ENST00000493564 HIST1H4GQ99525 98 aa5.38□□□□□ -1.55
SGIP1-213ENST00000493564 C12orf57Q99622 126 aa5.38□□□□□ -1.55
SGIP1-213ENST00000493564 PAM16Q9Y3D7 125 aa5.38□□□□□ -1.55
SGIP1-213ENST00000493564 SPINK1P00995 79 aa5.37□□□□□ -1.55
SGIP1-213ENST00000493564 HRCT1Q6UXD1 115 aa5.37□□□□□ -1.55
SGIP1-213ENST00000493564 TRBV7-6A0A0J9YX20 115 aa5.36□□□□□ -1.55
SGIP1-213ENST00000493564 A0A1B0GWB2 263 aa5.36□□□□□ -1.55
SGIP1-213ENST00000493564 SPRR1BP22528 89 aa5.36□□□□□ -1.55
SGIP1-213ENST00000493564 CTAG1AP78358 180 aa5.36□□□□□ -1.55
SGIP1-213ENST00000493564 Q1RN00 199 aa5.36□□□□□ -1.55
SGIP1-213ENST00000493564 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
SGIP1-213ENST00000493564 LAMTOR3Q9UHA4 124 aa5.35□□□□□ -1.55
SGIP1-213ENST00000493564 TEX49A0A1B0GTD5 131 aa5.34□□□□□ -1.55
SGIP1-213ENST00000493564 DLEU1O43261 78 aa5.34□□□□□ -1.55
SGIP1-213ENST00000493564 SLC25A34Q6PIV7 304 aa5.34□□□□□ -1.55
SGIP1-213ENST00000493564 VAMP8Q9BV40 100 aa5.34□□□□□ -1.55
SGIP1-213ENST00000493564 CDIP1Q9H305 208 aa5.34□□□□□ -1.55
SGIP1-213ENST00000493564 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
SGIP1-213ENST00000493564 H7C2G1 150 aa5.33□□□□□ -1.56
SGIP1-213ENST00000493564 LINC01547P58512 204 aaPredicted RBP5.33□□□□□ -1.56
SGIP1-213ENST00000493564 VAMP3Q15836 100 aa5.33□□□□□ -1.56
SGIP1-213ENST00000493564 Q8N377 158 aa5.33□□□□□ -1.56
SGIP1-213ENST00000493564 SMIM29Q86T20 159 aa5.32□□□□□ -1.56
SGIP1-213ENST00000493564 SLC25A20O43772 301 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 GHRHP01286 108 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 CFC1BP0CG36 223 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 CFC1P0CG37 223 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 LINC00575Q6W349 94 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 C2orf91Q6ZV80 131 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
SGIP1-213ENST00000493564 MUC2Q02817 5179 aa5.31□□□□□ -1.56
SGIP1-213ENST00000493564 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms