RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 IFITM1P13164 125 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 HINT1P49773 126 aaPredicted RBP4.35□□□□□ -1.71
TPR-208ENST00000492973 HSD52Q0P140 79 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 BVES-AS1Q5T3Y7 98 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 ARL17AQ8IVW1 177 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 CEND1Q8N111 149 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 MIR7-3HGQ8N6C7 128 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 LINC00308Q8TCZ7 52 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 TLX1NBP0CAT3 122 aa4.34□□□□□ -1.71
TPR-208ENST00000492973 FXYD2P54710 66 aa4.34□□□□□ -1.71
TPR-208ENST00000492973 NPC2P61916 151 aa4.34□□□□□ -1.71
TPR-208ENST00000492973 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
TPR-208ENST00000492973 Q6ZSA8 131 aa4.34□□□□□ -1.71
TPR-208ENST00000492973 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.33□□□□□ -1.72
TPR-208ENST00000492973 NDUFC2-KCTD14E9PQ53 114 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 PANO1I0J062 215 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 M0R143 59 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 XGP55808 180 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 Q6ZRP5 223 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 SNHG12Q9BXW3 62 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 SND1-IT1Q9HBX3 110 aa4.33□□□□□ -1.72
TPR-208ENST00000492973 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
TPR-208ENST00000492973 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
TPR-208ENST00000492973 A4D1N5 150 aa4.32□□□□□ -1.72
TPR-208ENST00000492973 HAMPP81172 84 aa4.32□□□□□ -1.72
TPR-208ENST00000492973 A0A1B0GWB2 263 aa4.31□□□□□ -1.72
TPR-208ENST00000492973 CHTF8P0CG12 524 aa4.31□□□□□ -1.72
TPR-208ENST00000492973 BATFQ16520 125 aa4.31□□□□□ -1.72
TPR-208ENST00000492973 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
TPR-208ENST00000492973 Q8NDZ9 215 aa4.31□□□□□ -1.72
TPR-208ENST00000492973 COPS9Q8WXC6 57 aa4.31□□□□□ -1.72
TPR-208ENST00000492973 XAGE1AQ9HD64 81 aa4.31□□□□□ -1.72
TPR-208ENST00000492973 A0A096LNI7 61 aa4.3□□□□□ -1.72
TPR-208ENST00000492973 RPL18AQ02543 176 aaKnown RBP4.3□□□□□ -1.72
TPR-208ENST00000492973 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
TPR-208ENST00000492973 NHP2Q9NX24 153 aaKnown RBP4.3□□□□□ -1.72
TPR-208ENST00000492973 IGKV2-28A0A075B6P5 120 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 IGKV2-24A0A0C4DH68 120 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 A6NDN8 102 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 NDUFC2O95298 119 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 IGKV2D-28P01615 120 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 PRR3P79522 188 aaKnown RBP4.29□□□□□ -1.72
TPR-208ENST00000492973 SCXQ7RTU7 201 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
TPR-208ENST00000492973 A0A0B4J2C4 111 aa4.28□□□□□ -1.72
TPR-208ENST00000492973 TAX1BP3O14907 124 aa4.28□□□□□ -1.72
TPR-208ENST00000492973 PLAC8Q9NZF1 115 aa4.28□□□□□ -1.72
TPR-208ENST00000492973 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
TPR-208ENST00000492973 A0A1W2PNN7 141 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 K7ERJ3 54 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 LINC00337Q8N6G1 96 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 PRO1854Q9UHT4 67 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 PKIGQ9Y2B9 76 aa4.27□□□□□ -1.73
TPR-208ENST00000492973 TRBV10-2A0A0K0K1G8 114 aa4.26□□□□□ -1.73
TPR-208ENST00000492973 SMR3BP02814 79 aaPredicted RBP4.26□□□□□ -1.73
TPR-208ENST00000492973 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
TPR-208ENST00000492973 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
TPR-208ENST00000492973 TRAV13-2A0A0B4J235 113 aa4.25□□□□□ -1.73
TPR-208ENST00000492973 M0R378 163 aa4.25□□□□□ -1.73
TPR-208ENST00000492973 NCR3O14931 201 aa4.25□□□□□ -1.73
TPR-208ENST00000492973 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
TPR-208ENST00000492973 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
TPR-208ENST00000492973 MYCBP2O75592 4640 aa4.25□□□□□ -1.73
TPR-208ENST00000492973 TSPAN13O95857 204 aa4.24□□□□□ -1.73
TPR-208ENST00000492973 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
TPR-208ENST00000492973 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
TPR-208ENST00000492973 OR13C6PQ8NH95 151 aa4.24□□□□□ -1.73
TPR-208ENST00000492973 LINC00167Q96N53 147 aa4.24□□□□□ -1.73
TPR-208ENST00000492973 TMEM126AQ9H061 195 aa4.24□□□□□ -1.73
TPR-208ENST00000492973 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
TPR-208ENST00000492973 TRBV10-3A0A0K0K1G6 114 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 H7C2G1 150 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
TPR-208ENST00000492973 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
TPR-208ENST00000492973 NKAPP1Q8N9T2 125 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 C7orf33Q8WU49 177 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 FAM218AQ96MZ4 157 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 NAA38Q9BRA0 125 aaKnown RBP4.23□□□□□ -1.73
TPR-208ENST00000492973 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
TPR-208ENST00000492973 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
TPR-208ENST00000492973 IGLV1-50A0A075B6I6 118 aa4.22□□□□□ -1.73
TPR-208ENST00000492973 H3BUT2 72 aa4.22□□□□□ -1.73
TPR-208ENST00000492973 RPL28P46779 137 aaKnown RBP4.22□□□□□ -1.73
TPR-208ENST00000492973 Q5VSD8 79 aa4.22□□□□□ -1.73
TPR-208ENST00000492973 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
TPR-208ENST00000492973 SMIM11BQ8TCY0 68 aa4.22□□□□□ -1.73
TPR-208ENST00000492973 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
TPR-208ENST00000492973 M0QXV9 152 aa4.21□□□□□ -1.74
TPR-208ENST00000492973 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
TPR-208ENST00000492973 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms