RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
PKP4-214ENST00000492496 NPC2P61916 151 aa9.37□□□□□ -0.91
PKP4-214ENST00000492496 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
PKP4-214ENST00000492496 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
PKP4-214ENST00000492496 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
PKP4-214ENST00000492496 SPRR4Q96PI1 79 aa9.36□□□□□ -0.91
PKP4-214ENST00000492496 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
PKP4-214ENST00000492496 HIST3H2BBQ8N257 126 aa9.35□□□□□ -0.91
PKP4-214ENST00000492496 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
PKP4-214ENST00000492496 B5MCH6 92 aa9.34□□□□□ -0.91
PKP4-214ENST00000492496 S100A2P29034 98 aa9.34□□□□□ -0.91
PKP4-214ENST00000492496 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
PKP4-214ENST00000492496 CBY1Q9Y3M2 126 aa9.34□□□□□ -0.91
PKP4-214ENST00000492496 ATOH7Q8N100 152 aa9.33□□□□□ -0.92
PKP4-214ENST00000492496 HIST1H2BLQ99880 126 aa9.33□□□□□ -0.92
PKP4-214ENST00000492496 TRAV23DV6A0A075B6W5 121 aa9.32□□□□□ -0.92
PKP4-214ENST00000492496 S100A6P06703 90 aa9.32□□□□□ -0.92
PKP4-214ENST00000492496 SNRPEP62304 92 aaKnown RBP9.32□□□□□ -0.92
PKP4-214ENST00000492496 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
PKP4-214ENST00000492496 TSPAN13O95857 204 aa9.31□□□□□ -0.92
PKP4-214ENST00000492496 CTAG1AP78358 180 aa9.31□□□□□ -0.92
PKP4-214ENST00000492496 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
PKP4-214ENST00000492496 Q6ZRX8 168 aa9.31□□□□□ -0.92
PKP4-214ENST00000492496 LINC00304Q8N9R0 145 aa9.31□□□□□ -0.92
PKP4-214ENST00000492496 ZNF73O43830 326 aaPredicted RBP9.29□□□□□ -0.92
PKP4-214ENST00000492496 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
PKP4-214ENST00000492496 LINC00518Q8N0U6 118 aa9.29□□□□□ -0.92
PKP4-214ENST00000492496 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
PKP4-214ENST00000492496 COPS9Q8WXC6 57 aa9.29□□□□□ -0.92
PKP4-214ENST00000492496 LINC00483Q53H64 154 aa9.28□□□□□ -0.92
PKP4-214ENST00000492496 Q6ZVH6 145 aa9.28□□□□□ -0.92
PKP4-214ENST00000492496 Q9BRP9 147 aa9.28□□□□□ -0.92
PKP4-214ENST00000492496 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
PKP4-214ENST00000492496 IFITM1P13164 125 aa9.27□□□□□ -0.93
PKP4-214ENST00000492496 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
PKP4-214ENST00000492496 PRR4Q16378 134 aa9.27□□□□□ -0.93
PKP4-214ENST00000492496 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
PKP4-214ENST00000492496 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
PKP4-214ENST00000492496 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
PKP4-214ENST00000492496 GAGE2AQ6NT46 116 aa9.24□□□□□ -0.93
PKP4-214ENST00000492496 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
PKP4-214ENST00000492496 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
PKP4-214ENST00000492496 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
PKP4-214ENST00000492496 LRP2P98164 4655 aa9.21□□□□□ -0.94
PKP4-214ENST00000492496 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.94
PKP4-214ENST00000492496 Q8NBF4 154 aa9.19□□□□□ -0.94
PKP4-214ENST00000492496 DHRS4-AS1Q9P1J3 65 aa9.19□□□□□ -0.94
PKP4-214ENST00000492496 UBR4Q5T4S7 5183 aa9.18□□□□□ -0.94
PKP4-214ENST00000492496 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
PKP4-214ENST00000492496 SSBP3-AS1Q7Z2R9 100 aa9.18□□□□□ -0.94
PKP4-214ENST00000492496 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
PKP4-214ENST00000492496 COX7BP24311 80 aa9.17□□□□□ -0.94
PKP4-214ENST00000492496 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
PKP4-214ENST00000492496 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
PKP4-214ENST00000492496 TRBV7-6A0A0J9YX20 115 aa9.16□□□□□ -0.94
PKP4-214ENST00000492496 MOBPQ13875 183 aa9.16□□□□□ -0.94
PKP4-214ENST00000492496 A6NDN8 102 aa9.15□□□□□ -0.94
PKP4-214ENST00000492496 SPINK1P00995 79 aa9.15□□□□□ -0.94
PKP4-214ENST00000492496 ST20-AS1Q8NBB2 130 aa9.15□□□□□ -0.94
PKP4-214ENST00000492496 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
PKP4-214ENST00000492496 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
PKP4-214ENST00000492496 LPAP08519 4548 aa9.13□□□□□ -0.95
PKP4-214ENST00000492496 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
PKP4-214ENST00000492496 SPRR1BP22528 89 aa9.13□□□□□ -0.95
PKP4-214ENST00000492496 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
PKP4-214ENST00000492496 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
PKP4-214ENST00000492496 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
PKP4-214ENST00000492496 COX8AP10176 69 aa9.1□□□□□ -0.95
PKP4-214ENST00000492496 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
PKP4-214ENST00000492496 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
PKP4-214ENST00000492496 A4D1N5 150 aa9.09□□□□□ -0.95
PKP4-214ENST00000492496 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.95
PKP4-214ENST00000492496 DLEU1O43261 78 aa9.08□□□□□ -0.96
PKP4-214ENST00000492496 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
PKP4-214ENST00000492496 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
PKP4-214ENST00000492496 TAL2Q16559 108 aa9.07□□□□□ -0.96
PKP4-214ENST00000492496 LAMTOR3Q9UHA4 124 aa9.07□□□□□ -0.96
PKP4-214ENST00000492496 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
PKP4-214ENST00000492496 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
PKP4-214ENST00000492496 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
PKP4-214ENST00000492496 Q8N377 158 aa9.04□□□□□ -0.96
PKP4-214ENST00000492496 VAMP3Q15836 100 aa9.03□□□□□ -0.96
PKP4-214ENST00000492496 DEFB105AQ8NG35 78 aa9.03□□□□□ -0.96
PKP4-214ENST00000492496 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
PKP4-214ENST00000492496 SLC25A20O43772 301 aa9.02□□□□□ -0.97
PKP4-214ENST00000492496 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
PKP4-214ENST00000492496 VAMP8Q9BV40 100 aa9.02□□□□□ -0.97
PKP4-214ENST00000492496 PAM16Q9Y3D7 125 aa9.02□□□□□ -0.97
PKP4-214ENST00000492496 C14orf144Q96I85 54 aa9.01□□□□□ -0.97
PKP4-214ENST00000492496 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
PKP4-214ENST00000492496 LINC01547P58512 204 aaPredicted RBP9□□□□□ -0.97
PKP4-214ENST00000492496 Q1RN00 199 aa9□□□□□ -0.97
PKP4-214ENST00000492496 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
PKP4-214ENST00000492496 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
PKP4-214ENST00000492496 C12orf57Q99622 126 aa8.97□□□□□ -0.97
PKP4-214ENST00000492496 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
PKP4-214ENST00000492496 CD164Q04900 197 aa8.96□□□□□ -0.98
PKP4-214ENST00000492496 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.98
PKP4-214ENST00000492496 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
PKP4-214ENST00000492496 BVES-AS1Q5T3Y7 98 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms