RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 ESRGQ1W209 222 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 HIGD2AQ9BW72 106 aa6.88□□□□□ -1.31
SREBF2-208ENST00000491541 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
SREBF2-208ENST00000491541 KRTAP1-3Q8IUG1 177 aa6.88□□□□□ -1.31
SREBF2-208ENST00000491541 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
SREBF2-208ENST00000491541 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
SREBF2-208ENST00000491541 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
SREBF2-208ENST00000491541 STAB1Q9NY15 2570 aa6.87□□□□□ -1.31
SREBF2-208ENST00000491541 IGLV1-51P01701 117 aa6.87□□□□□ -1.31
SREBF2-208ENST00000491541 CHCHD10Q8WYQ3 142 aaPredicted RBP6.87□□□□□ -1.31
SREBF2-208ENST00000491541 FLNCQ14315 2725 aa6.87□□□□□ -1.31
SREBF2-208ENST00000491541 SPAG11BQ08648 103 aa6.86□□□□□ -1.31
SREBF2-208ENST00000491541 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
SREBF2-208ENST00000491541 SPRR1AP35321 89 aa6.86□□□□□ -1.31
SREBF2-208ENST00000491541 NKAPP1Q8N9T2 125 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 ZANQ9Y493 2812 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 H3BNG1 76 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 PRO0255Q9UI72 69 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 NOTCH1P46531 2555 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 UBR5O95071 2799 aaPredicted RBP6.85□□□□□ -1.31
SREBF2-208ENST00000491541 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 CAMK2N2Q96S95 79 aa6.85□□□□□ -1.31
SREBF2-208ENST00000491541 TLX1NBP0CAT3 122 aa6.84□□□□□ -1.31
SREBF2-208ENST00000491541 COX7BP24311 80 aa6.84□□□□□ -1.31
SREBF2-208ENST00000491541 HIGD2BQ4VC39 106 aa6.84□□□□□ -1.31
SREBF2-208ENST00000491541 GCN1Q92616 2671 aaKnown RBP6.84□□□□□ -1.32
SREBF2-208ENST00000491541 A0A087X002 238 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 hDV103S1A0JD37 113 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 PMAIP1Q13794 54 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 REG3AQ06141 175 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 DNAH7Q8WXX0 4024 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 CSMD2Q7Z408 3487 aa6.83□□□□□ -1.32
SREBF2-208ENST00000491541 CELSR2Q9HCU4 2923 aa6.82□□□□□ -1.32
SREBF2-208ENST00000491541 C10orf25Q5T742 122 aa6.82□□□□□ -1.32
SREBF2-208ENST00000491541 LINC00588Q9Y4M8 146 aa6.81□□□□□ -1.32
SREBF2-208ENST00000491541 ASB16-AS1Q495Z4 193 aa6.81□□□□□ -1.32
SREBF2-208ENST00000491541 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
SREBF2-208ENST00000491541 RETNQ9HD89 108 aa6.81□□□□□ -1.32
SREBF2-208ENST00000491541 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
SREBF2-208ENST00000491541 COL6A5A8TX70 2615 aa6.81□□□□□ -1.32
SREBF2-208ENST00000491541 CYSRT1A8MQ03 144 aa6.8□□□□□ -1.32
SREBF2-208ENST00000491541 ZNF73O43830 326 aaPredicted RBP6.8□□□□□ -1.32
SREBF2-208ENST00000491541 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
SREBF2-208ENST00000491541 VPREB1P12018 145 aa6.79□□□□□ -1.32
SREBF2-208ENST00000491541 X6R8D5 127 aa6.79□□□□□ -1.32
SREBF2-208ENST00000491541 LYRM9A8MSI8 78 aa6.79□□□□□ -1.32
SREBF2-208ENST00000491541 SPANXA2-OT1Q8N9U9 137 aa6.79□□□□□ -1.32
SREBF2-208ENST00000491541 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
SREBF2-208ENST00000491541 FBN2P35556 2912 aa6.79□□□□□ -1.32
SREBF2-208ENST00000491541 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
SREBF2-208ENST00000491541 TRRAPQ9Y4A5 3859 aa6.77□□□□□ -1.33
SREBF2-208ENST00000491541 UBE2BP63146 152 aa6.77□□□□□ -1.33
SREBF2-208ENST00000491541 Q9BRP9 147 aa6.77□□□□□ -1.33
SREBF2-208ENST00000491541 IGSF10Q6WRI0 2623 aa6.77□□□□□ -1.33
SREBF2-208ENST00000491541 H3BPC8 53 aa6.76□□□□□ -1.33
SREBF2-208ENST00000491541 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
SREBF2-208ENST00000491541 APCP25054 2843 aa6.74□□□□□ -1.33
SREBF2-208ENST00000491541 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
SREBF2-208ENST00000491541 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
SREBF2-208ENST00000491541 DEFB131BA0A096LNP1 70 aa6.73□□□□□ -1.33
SREBF2-208ENST00000491541 C1orf64Q8NEQ6 169 aa6.73□□□□□ -1.33
SREBF2-208ENST00000491541 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
SREBF2-208ENST00000491541 NF1P21359 2839 aa6.72□□□□□ -1.33
SREBF2-208ENST00000491541 KRTAP29-1A8MX34 341 aaPredicted RBP6.72□□□□□ -1.33
SREBF2-208ENST00000491541 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
SREBF2-208ENST00000491541 BAHCC1Q9P281 2608 aa6.72□□□□□ -1.33
SREBF2-208ENST00000491541 A8MUN3 132 aa6.72□□□□□ -1.33
SREBF2-208ENST00000491541 DEFB116Q30KQ4 102 aa6.72□□□□□ -1.33
SREBF2-208ENST00000491541 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.34
SREBF2-208ENST00000491541 A0A096LNI7 61 aa6.71□□□□□ -1.34
SREBF2-208ENST00000491541 NIPBLQ6KC79 2804 aaeCLIP6.71□□□□□ -1.34
SREBF2-208ENST00000491541 MXRA5Q9NR99 2828 aa6.7□□□□□ -1.34
SREBF2-208ENST00000491541 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
SREBF2-208ENST00000491541 EGFEM1PQ0D2K5 195 aa6.7□□□□□ -1.34
SREBF2-208ENST00000491541 LELP1Q5T871 98 aa6.7□□□□□ -1.34
SREBF2-208ENST00000491541 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
SREBF2-208ENST00000491541 UNC79Q9P2D8 2635 aa6.7□□□□□ -1.34
SREBF2-208ENST00000491541 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.69□□□□□ -1.34
SREBF2-208ENST00000491541 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
SREBF2-208ENST00000491541 TRAV22A0A0B4J277 110 aa6.69□□□□□ -1.34
SREBF2-208ENST00000491541 M0R378 163 aa6.69□□□□□ -1.34
SREBF2-208ENST00000491541 Q6ZRP5 223 aa6.69□□□□□ -1.34
SREBF2-208ENST00000491541 LYSTQ99698 3801 aa6.69□□□□□ -1.34
SREBF2-208ENST00000491541 C6orf48Q9UBA6 75 aa6.68□□□□□ -1.34
SREBF2-208ENST00000491541 DNAH6Q9C0G6 4158 aa6.68□□□□□ -1.34
SREBF2-208ENST00000491541 KPRPQ5T749 579 aaPredicted RBP6.68□□□□□ -1.34
SREBF2-208ENST00000491541 WFDC10BQ8IUB3 73 aa6.68□□□□□ -1.34
SREBF2-208ENST00000491541 MP68P56378 58 aa6.67□□□□□ -1.34
SREBF2-208ENST00000491541 NSD1Q96L73 2696 aaPredicted RBP6.67□□□□□ -1.34
SREBF2-208ENST00000491541 UTP20O75691 2785 aaKnown RBP6.67□□□□□ -1.34
SREBF2-208ENST00000491541 SPRR1BP22528 89 aa6.67□□□□□ -1.34
SREBF2-208ENST00000491541 C9orf163Q8N9P6 203 aa6.67□□□□□ -1.34
SREBF2-208ENST00000491541 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
SREBF2-208ENST00000491541 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
SREBF2-208ENST00000491541 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
SREBF2-208ENST00000491541 RPL37AP8A6NKH3 93 aa6.65□□□□□ -1.34
SREBF2-208ENST00000491541 A6NED7 52 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms