RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NPC2P61916 151 aa10.26□□□□□ -0.77
HMGN1-219ENST00000491183 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
HMGN1-219ENST00000491183 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
HMGN1-219ENST00000491183 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
HMGN1-219ENST00000491183 Q6ZRX8 168 aa10.25□□□□□ -0.77
HMGN1-219ENST00000491183 CDIP1Q9H305 208 aa10.24□□□□□ -0.77
HMGN1-219ENST00000491183 LINC01545Q5VT33 79 aa10.22□□□□□ -0.77
HMGN1-219ENST00000491183 LITAFQ99732 161 aa10.22□□□□□ -0.77
HMGN1-219ENST00000491183 TRAV23DV6A0A075B6W5 121 aa10.21□□□□□ -0.77
HMGN1-219ENST00000491183 SPINK1P00995 79 aa10.2□□□□□ -0.78
HMGN1-219ENST00000491183 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
HMGN1-219ENST00000491183 MOBPQ13875 183 aa10.19□□□□□ -0.78
HMGN1-219ENST00000491183 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
HMGN1-219ENST00000491183 FP248Q71RG6 208 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-219ENST00000491183 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
HMGN1-219ENST00000491183 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-219ENST00000491183 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
HMGN1-219ENST00000491183 TIMM17BO60830 172 aa10.17□□□□□ -0.78
HMGN1-219ENST00000491183 C3orf79P0CE67 100 aa10.17□□□□□ -0.78
HMGN1-219ENST00000491183 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-219ENST00000491183 TTTY13Q9BZ97 58 aa10.17□□□□□ -0.78
HMGN1-219ENST00000491183 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
HMGN1-219ENST00000491183 A0A0U1RQV1 116 aa10.15□□□□□ -0.78
HMGN1-219ENST00000491183 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
HMGN1-219ENST00000491183 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
HMGN1-219ENST00000491183 ZNF815PA8K554 130 aa10.14□□□□□ -0.79
HMGN1-219ENST00000491183 KRTAP13-3Q3SY46 172 aa10.14□□□□□ -0.79
HMGN1-219ENST00000491183 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
HMGN1-219ENST00000491183 Q8N377 158 aa10.12□□□□□ -0.79
HMGN1-219ENST00000491183 OR13C6PQ8NH95 151 aa10.12□□□□□ -0.79
HMGN1-219ENST00000491183 HINT1P49773 126 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-219ENST00000491183 KRTDAPP60985 99 aa10.11□□□□□ -0.79
HMGN1-219ENST00000491183 RPS29P62273 56 aaKnown RBP10.11□□□□□ -0.79
HMGN1-219ENST00000491183 CBY1Q9Y3M2 126 aa10.11□□□□□ -0.79
HMGN1-219ENST00000491183 C5orf52A6NGY3 159 aa10.09□□□□□ -0.79
HMGN1-219ENST00000491183 SPANXDQ9BXN6 97 aa10.09□□□□□ -0.79
HMGN1-219ENST00000491183 FAT4Q6V0I7 4981 aa10.08□□□□□ -0.8
HMGN1-219ENST00000491183 LCE2AQ5TA79 106 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-219ENST00000491183 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
HMGN1-219ENST00000491183 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
HMGN1-219ENST00000491183 SLC25A20O43772 301 aa10.06□□□□□ -0.8
HMGN1-219ENST00000491183 SPRR1BP22528 89 aa10.06□□□□□ -0.8
HMGN1-219ENST00000491183 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
HMGN1-219ENST00000491183 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
HMGN1-219ENST00000491183 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
HMGN1-219ENST00000491183 ELOF1P60002 83 aaKnown RBP10.03□□□□□ -0.8
HMGN1-219ENST00000491183 SCGB1D4Q6XE38 83 aa10.03□□□□□ -0.8
HMGN1-219ENST00000491183 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
HMGN1-219ENST00000491183 COX7BP24311 80 aa10.02□□□□□ -0.81
HMGN1-219ENST00000491183 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
HMGN1-219ENST00000491183 C20orf202A1L168 122 aa10.01□□□□□ -0.81
HMGN1-219ENST00000491183 PCP2Q8IVA1 136 aa10□□□□□ -0.81
HMGN1-219ENST00000491183 IFITM1P13164 125 aa9.98□□□□□ -0.81
HMGN1-219ENST00000491183 SLC25A34Q6PIV7 304 aa9.98□□□□□ -0.81
HMGN1-219ENST00000491183 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
HMGN1-219ENST00000491183 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
HMGN1-219ENST00000491183 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
HMGN1-219ENST00000491183 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.82
HMGN1-219ENST00000491183 TAL2Q16559 108 aa9.96□□□□□ -0.82
HMGN1-219ENST00000491183 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.82
HMGN1-219ENST00000491183 Q6ZVH6 145 aa9.96□□□□□ -0.82
HMGN1-219ENST00000491183 DEFB105AQ8NG35 78 aa9.96□□□□□ -0.82
HMGN1-219ENST00000491183 A6NDN8 102 aa9.95□□□□□ -0.82
HMGN1-219ENST00000491183 COPS9Q8WXC6 57 aa9.95□□□□□ -0.82
HMGN1-219ENST00000491183 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
HMGN1-219ENST00000491183 Q1RN00 199 aa9.94□□□□□ -0.82
HMGN1-219ENST00000491183 XP32Q5T750 250 aa9.94□□□□□ -0.82
HMGN1-219ENST00000491183 TEX49A0A1B0GTD5 131 aa9.93□□□□□ -0.82
HMGN1-219ENST00000491183 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
HMGN1-219ENST00000491183 SMIM29Q86T20 159 aa9.93□□□□□ -0.82
HMGN1-219ENST00000491183 AKR1D1P51857 326 aa9.92□□□□□ -0.82
HMGN1-219ENST00000491183 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-219ENST00000491183 LIMD2Q9BT23 127 aa9.91□□□□□ -0.82
HMGN1-219ENST00000491183 SNRPEP62304 92 aaKnown RBP9.9□□□□□ -0.82
HMGN1-219ENST00000491183 HIST3H2BBQ8N257 126 aa9.9□□□□□ -0.82
HMGN1-219ENST00000491183 IGLV5-48A0A075B6I7 105 aa9.89□□□□□ -0.83
HMGN1-219ENST00000491183 SMIM11BQ8TCY0 68 aa9.89□□□□□ -0.83
HMGN1-219ENST00000491183 HIST1H2BLQ99880 126 aa9.89□□□□□ -0.83
HMGN1-219ENST00000491183 KRTAP9-2Q9BYQ4 174 aa9.89□□□□□ -0.83
HMGN1-219ENST00000491183 PRO1933Q9H354 126 aa9.89□□□□□ -0.83
HMGN1-219ENST00000491183 CD164Q04900 197 aa9.88□□□□□ -0.83
HMGN1-219ENST00000491183 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
HMGN1-219ENST00000491183 A4D1N5 150 aa9.86□□□□□ -0.83
HMGN1-219ENST00000491183 A0A0G2JQZ4 141 aa9.85□□□□□ -0.83
HMGN1-219ENST00000491183 H7C2G1 150 aa9.84□□□□□ -0.83
HMGN1-219ENST00000491183 S100A2P29034 98 aa9.84□□□□□ -0.83
HMGN1-219ENST00000491183 Q5XG85 94 aa9.82□□□□□ -0.84
HMGN1-219ENST00000491183 C9orf92A6NGG3 77 aa9.81□□□□□ -0.84
HMGN1-219ENST00000491183 NHP2Q9NX24 153 aaKnown RBP9.81□□□□□ -0.84
HMGN1-219ENST00000491183 HSBP1L1C9JCN9 74 aa9.79□□□□□ -0.84
HMGN1-219ENST00000491183 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
HMGN1-219ENST00000491183 S100A1P23297 94 aa9.78□□□□□ -0.84
HMGN1-219ENST00000491183 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
HMGN1-219ENST00000491183 VAMP3Q15836 100 aa9.77□□□□□ -0.85
HMGN1-219ENST00000491183 PCOTHQ58A44 107 aa9.76□□□□□ -0.85
HMGN1-219ENST00000491183 S100A6P06703 90 aa9.75□□□□□ -0.85
HMGN1-219ENST00000491183 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
HMGN1-219ENST00000491183 hADV29S1A0JD25 119 aa9.72□□□□□ -0.85
HMGN1-219ENST00000491183 Q6ZQY7 126 aa9.72□□□□□ -0.85
HMGN1-219ENST00000491183 SCGB1D1O95968 90 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms