RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 Q1RN00 199 aa6.75□□□□□ -1.33
HDAC9-225ENST00000490851 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-225ENST00000490851 TGP01266 2768 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 C7orf65Q6ZTY9 151 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 COX6CP09669 75 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 DIRC1Q969H9 104 aa6.74□□□□□ -1.33
HDAC9-225ENST00000490851 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
HDAC9-225ENST00000490851 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
HDAC9-225ENST00000490851 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
HDAC9-225ENST00000490851 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
HDAC9-225ENST00000490851 UBE2DNLQ8IWF7 75 aa6.72□□□□□ -1.33
HDAC9-225ENST00000490851 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.33
HDAC9-225ENST00000490851 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.33
HDAC9-225ENST00000490851 F8WEM9 126 aa6.71□□□□□ -1.34
HDAC9-225ENST00000490851 NKAPP1Q8N9T2 125 aa6.71□□□□□ -1.34
HDAC9-225ENST00000490851 FUSP35637 526 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC9-225ENST00000490851 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
HDAC9-225ENST00000490851 TRIAP1O43715 76 aa6.7□□□□□ -1.34
HDAC9-225ENST00000490851 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
HDAC9-225ENST00000490851 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
HDAC9-225ENST00000490851 A6NN06 94 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 LINC00313P59037 77 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 DNAH7Q8WXX0 4024 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 H0Y9J4 135 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 MP68P56378 58 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
HDAC9-225ENST00000490851 CXCL6P80162 114 aa6.68□□□□□ -1.34
HDAC9-225ENST00000490851 CASC10Q5T4H9 136 aa6.68□□□□□ -1.34
HDAC9-225ENST00000490851 PLECQ15149 4684 aaKnown RBP6.68□□□□□ -1.34
HDAC9-225ENST00000490851 TRBV10-3A0A0K0K1G6 114 aa6.68□□□□□ -1.34
HDAC9-225ENST00000490851 LECT2O14960 151 aa6.68□□□□□ -1.34
HDAC9-225ENST00000490851 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
HDAC9-225ENST00000490851 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
HDAC9-225ENST00000490851 UBE2AP49459 152 aa6.67□□□□□ -1.34
HDAC9-225ENST00000490851 A0A087WVE0 104 aa6.67□□□□□ -1.34
HDAC9-225ENST00000490851 C6orf48Q9UBA6 75 aa6.67□□□□□ -1.34
HDAC9-225ENST00000490851 NUPR2A6NF83 97 aa6.66□□□□□ -1.34
HDAC9-225ENST00000490851 PRR3P79522 188 aaKnown RBP6.66□□□□□ -1.34
HDAC9-225ENST00000490851 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
HDAC9-225ENST00000490851 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
HDAC9-225ENST00000490851 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
HDAC9-225ENST00000490851 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
HDAC9-225ENST00000490851 DNAH1Q9P2D7 4330 aa6.65□□□□□ -1.35
HDAC9-225ENST00000490851 COX17Q14061 63 aa6.65□□□□□ -1.35
HDAC9-225ENST00000490851 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.35
HDAC9-225ENST00000490851 IGKV3D-7A0A0C4DH55 119 aa6.64□□□□□ -1.35
HDAC9-225ENST00000490851 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
HDAC9-225ENST00000490851 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
HDAC9-225ENST00000490851 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
HDAC9-225ENST00000490851 CLEC2BQ92478 149 aa6.64□□□□□ -1.35
HDAC9-225ENST00000490851 NCR3O14931 201 aa6.63□□□□□ -1.35
HDAC9-225ENST00000490851 Q8NDZ9 215 aa6.63□□□□□ -1.35
HDAC9-225ENST00000490851 RMI2Q96E14 147 aa6.63□□□□□ -1.35
HDAC9-225ENST00000490851 GVQW2A0A096LPI5 108 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-225ENST00000490851 SYCNQ0VAF6 134 aa6.62□□□□□ -1.35
HDAC9-225ENST00000490851 PRYO14603 147 aa6.62□□□□□ -1.35
HDAC9-225ENST00000490851 PSCAO43653 123 aa6.61□□□□□ -1.35
HDAC9-225ENST00000490851 RPL28P46779 137 aaKnown RBP6.61□□□□□ -1.35
HDAC9-225ENST00000490851 M0R2N4 97 aa6.6□□□□□ -1.35
HDAC9-225ENST00000490851 ERC2-IT1O76042 136 aa6.6□□□□□ -1.35
HDAC9-225ENST00000490851 DNAL4O96015 105 aa6.6□□□□□ -1.35
HDAC9-225ENST00000490851 Q6ZRP5 223 aa6.6□□□□□ -1.35
HDAC9-225ENST00000490851 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
HDAC9-225ENST00000490851 SLPIP03973 132 aa6.59□□□□□ -1.35
HDAC9-225ENST00000490851 TRAV23DV6A0A075B6W5 121 aa6.57□□□□□ -1.36
HDAC9-225ENST00000490851 NBDYA0A0U1RRE5 68 aa6.57□□□□□ -1.36
HDAC9-225ENST00000490851 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
HDAC9-225ENST00000490851 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
HDAC9-225ENST00000490851 C16orf90A8MZG2 172 aa6.56□□□□□ -1.36
HDAC9-225ENST00000490851 SNURFQ9Y675 71 aa6.56□□□□□ -1.36
HDAC9-225ENST00000490851 Q75L30 129 aa6.56□□□□□ -1.36
HDAC9-225ENST00000490851 FAM218AQ96MZ4 157 aa6.56□□□□□ -1.36
HDAC9-225ENST00000490851 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
HDAC9-225ENST00000490851 VPS13DQ5THJ4 4388 aa6.55□□□□□ -1.36
HDAC9-225ENST00000490851 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-225ENST00000490851 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
HDAC9-225ENST00000490851 MUC7Q8TAX7 377 aa6.55□□□□□ -1.36
HDAC9-225ENST00000490851 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
HDAC9-225ENST00000490851 TRBV7-4A0A0J9YYF1 115 aa6.54□□□□□ -1.36
HDAC9-225ENST00000490851 BAALC-AS2P0C853 105 aa6.54□□□□□ -1.36
HDAC9-225ENST00000490851 C9orf129Q5T035 196 aaKnown RBP6.54□□□□□ -1.36
HDAC9-225ENST00000490851 OBSCN-AS1Q96MR7 158 aa6.54□□□□□ -1.36
HDAC9-225ENST00000490851 A0A087WYN8 130 aa6.53□□□□□ -1.36
HDAC9-225ENST00000490851 PSPHP1O15172 72 aa6.52□□□□□ -1.37
HDAC9-225ENST00000490851 KMT2AQ03164 3969 aa6.52□□□□□ -1.37
HDAC9-225ENST00000490851 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
HDAC9-225ENST00000490851 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
HDAC9-225ENST00000490851 LY6G6CO95867 125 aa6.51□□□□□ -1.37
HDAC9-225ENST00000490851 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
HDAC9-225ENST00000490851 HCG22E2RYF7 251 aa6.5□□□□□ -1.37
HDAC9-225ENST00000490851 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
HDAC9-225ENST00000490851 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
HDAC9-225ENST00000490851 Q5VV11 94 aa6.49□□□□□ -1.37
HDAC9-225ENST00000490851 ZNF706Q9Y5V0 76 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-225ENST00000490851 H0YGX0 51 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms