RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 FAM19A1Q7Z5A9 133 aa10.53□□□□□ -0.72
ERCC3-207ENST00000490062 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
ERCC3-207ENST00000490062 C2orf91Q6ZV80 131 aa10.52□□□□□ -0.73
ERCC3-207ENST00000490062 TRAV23DV6A0A075B6W5 121 aa10.51□□□□□ -0.73
ERCC3-207ENST00000490062 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
ERCC3-207ENST00000490062 PRLHP81277 87 aa10.5□□□□□ -0.73
ERCC3-207ENST00000490062 TAL2Q16559 108 aa10.49□□□□□ -0.73
ERCC3-207ENST00000490062 HIST1H4GQ99525 98 aa10.49□□□□□ -0.73
ERCC3-207ENST00000490062 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
ERCC3-207ENST00000490062 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
ERCC3-207ENST00000490062 A4D1N5 150 aa10.48□□□□□ -0.73
ERCC3-207ENST00000490062 B5MCH6 92 aa10.48□□□□□ -0.73
ERCC3-207ENST00000490062 ZNF73O43830 326 aaPredicted RBP10.48□□□□□ -0.73
ERCC3-207ENST00000490062 SMIM6P0DI80 62 aa10.48□□□□□ -0.73
ERCC3-207ENST00000490062 MT1HL1P0DM35 61 aa10.48□□□□□ -0.73
ERCC3-207ENST00000490062 OR13C6PQ8NH95 151 aa10.47□□□□□ -0.73
ERCC3-207ENST00000490062 DMBT1Q9UGM3 2413 aaPredicted RBP10.47□□□□□ -0.73
ERCC3-207ENST00000490062 Q6ZRX8 168 aa10.46□□□□□ -0.73
ERCC3-207ENST00000490062 LOC105371267A0A1B0GV96 52 aa10.45□□□□□ -0.74
ERCC3-207ENST00000490062 KRTAP10-8P60410 259 aa10.45□□□□□ -0.74
ERCC3-207ENST00000490062 TNXBP22105 4242 aa10.45□□□□□ -0.74
ERCC3-207ENST00000490062 UQCR10Q9UDW1 63 aa10.44□□□□□ -0.74
ERCC3-207ENST00000490062 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
ERCC3-207ENST00000490062 J3QL48 77 aa10.43□□□□□ -0.74
ERCC3-207ENST00000490062 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
ERCC3-207ENST00000490062 A6NDN8 102 aa10.42□□□□□ -0.74
ERCC3-207ENST00000490062 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
ERCC3-207ENST00000490062 HIGD2AQ9BW72 106 aa10.42□□□□□ -0.74
ERCC3-207ENST00000490062 CEND1Q8N111 149 aa10.41□□□□□ -0.74
ERCC3-207ENST00000490062 Q9BRP9 147 aa10.41□□□□□ -0.74
ERCC3-207ENST00000490062 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
ERCC3-207ENST00000490062 FAM229BQ4G0N7 80 aa10.4□□□□□ -0.74
ERCC3-207ENST00000490062 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
ERCC3-207ENST00000490062 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
ERCC3-207ENST00000490062 A0A0B4J2C4 111 aa10.38□□□□□ -0.75
ERCC3-207ENST00000490062 RPL13AP40429 203 aaKnown RBP10.38□□□□□ -0.75
ERCC3-207ENST00000490062 HSD52Q0P140 79 aa10.38□□□□□ -0.75
ERCC3-207ENST00000490062 SPRR4Q96PI1 79 aa10.38□□□□□ -0.75
ERCC3-207ENST00000490062 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
ERCC3-207ENST00000490062 CFC1BP0CG36 223 aa10.37□□□□□ -0.75
ERCC3-207ENST00000490062 CFC1P0CG37 223 aa10.37□□□□□ -0.75
ERCC3-207ENST00000490062 SMIM11BQ8TCY0 68 aa10.37□□□□□ -0.75
ERCC3-207ENST00000490062 HERC1Q15751 4861 aa10.36□□□□□ -0.75
ERCC3-207ENST00000490062 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
ERCC3-207ENST00000490062 A6NJY4 79 aa10.36□□□□□ -0.75
ERCC3-207ENST00000490062 COX7BP24311 80 aa10.36□□□□□ -0.75
ERCC3-207ENST00000490062 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
ERCC3-207ENST00000490062 DHRS4-AS1Q9P1J3 65 aa10.36□□□□□ -0.75
ERCC3-207ENST00000490062 ERC2-IT1O76042 136 aa10.35□□□□□ -0.75
ERCC3-207ENST00000490062 LINC00483Q53H64 154 aa10.35□□□□□ -0.75
ERCC3-207ENST00000490062 CRYGAP11844 174 aa10.34□□□□□ -0.75
ERCC3-207ENST00000490062 FXYD2P54710 66 aa10.34□□□□□ -0.75
ERCC3-207ENST00000490062 A0A087X002 238 aa10.33□□□□□ -0.76
ERCC3-207ENST00000490062 C12orf57Q99622 126 aa10.32□□□□□ -0.76
ERCC3-207ENST00000490062 RAB37Q96AX2 223 aa10.3□□□□□ -0.76
ERCC3-207ENST00000490062 VAMP3Q15836 100 aa10.29□□□□□ -0.76
ERCC3-207ENST00000490062 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
ERCC3-207ENST00000490062 PRO1933Q9H354 126 aa10.29□□□□□ -0.76
ERCC3-207ENST00000490062 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
ERCC3-207ENST00000490062 SPRR1BP22528 89 aa10.28□□□□□ -0.76
ERCC3-207ENST00000490062 PRO1854Q9UHT4 67 aa10.28□□□□□ -0.76
ERCC3-207ENST00000490062 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.77
ERCC3-207ENST00000490062 NHP2Q9NX24 153 aaKnown RBP10.27□□□□□ -0.77
ERCC3-207ENST00000490062 LINC00575Q6W349 94 aa10.25□□□□□ -0.77
ERCC3-207ENST00000490062 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
ERCC3-207ENST00000490062 TSTD3H0UI37 97 aa10.24□□□□□ -0.77
ERCC3-207ENST00000490062 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
ERCC3-207ENST00000490062 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
ERCC3-207ENST00000490062 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
ERCC3-207ENST00000490062 CTAG1AP78358 180 aa10.23□□□□□ -0.77
ERCC3-207ENST00000490062 H0YGX0 51 aa10.21□□□□□ -0.77
ERCC3-207ENST00000490062 SLC25A20O43772 301 aa10.21□□□□□ -0.77
ERCC3-207ENST00000490062 C3orf22Q8N5N4 141 aa10.21□□□□□ -0.77
ERCC3-207ENST00000490062 H7C2G1 150 aa10.2□□□□□ -0.78
ERCC3-207ENST00000490062 LINC01547P58512 204 aaPredicted RBP10.2□□□□□ -0.78
ERCC3-207ENST00000490062 M0R143 59 aa10.19□□□□□ -0.78
ERCC3-207ENST00000490062 TEX49A0A1B0GTD5 131 aa10.18□□□□□ -0.78
ERCC3-207ENST00000490062 hADV29S1A0JD25 119 aa10.18□□□□□ -0.78
ERCC3-207ENST00000490062 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
ERCC3-207ENST00000490062 Q1RN00 199 aa10.17□□□□□ -0.78
ERCC3-207ENST00000490062 A0A1B0GX51 115 aa10.16□□□□□ -0.78
ERCC3-207ENST00000490062 K7ERJ3 54 aa10.16□□□□□ -0.78
ERCC3-207ENST00000490062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-207ENST00000490062 HMCN2Q8NDA2 5059 aa10.16□□□□□ -0.78
ERCC3-207ENST00000490062 LINC00304Q8N9R0 145 aa10.15□□□□□ -0.78
ERCC3-207ENST00000490062 TRIAP1O43715 76 aa10.14□□□□□ -0.79
ERCC3-207ENST00000490062 TSPAN13O95857 204 aa10.14□□□□□ -0.79
ERCC3-207ENST00000490062 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
ERCC3-207ENST00000490062 Q6ZQY7 126 aa10.13□□□□□ -0.79
ERCC3-207ENST00000490062 SMIM29Q86T20 159 aa10.13□□□□□ -0.79
ERCC3-207ENST00000490062 Q8N377 158 aa10.13□□□□□ -0.79
ERCC3-207ENST00000490062 PPDPFLQ8WWR9 84 aa10.13□□□□□ -0.79
ERCC3-207ENST00000490062 LAMTOR3Q9UHA4 124 aa10.13□□□□□ -0.79
ERCC3-207ENST00000490062 Q8NBF4 154 aa10.12□□□□□ -0.79
ERCC3-207ENST00000490062 SNCGO76070 127 aa10.11□□□□□ -0.79
ERCC3-207ENST00000490062 MOBPQ13875 183 aa10.11□□□□□ -0.79
ERCC3-207ENST00000490062 FAM218AQ96MZ4 157 aa10.11□□□□□ -0.79
ERCC3-207ENST00000490062 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
ERCC3-207ENST00000490062 OCIAD2Q56VL3 154 aa10.1□□□□□ -0.79
ERCC3-207ENST00000490062 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms