RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 BTAF1O14981 1849 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 DOCK2Q92608 1830 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 TANC1Q9C0D5 1861 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 MYH8P13535 1937 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 FAM208AQ9UK61 1670 aaKnown RBP0.3□□□□□ -2.36
CCDC39-206ENST00000489868 A0A0G2JMZ2 1700 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 NUP188Q5SRE5 1749 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 PKD1L3Q7Z443 1732 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 DOT1LQ8TEK3 1739 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 SIPA1L3O60292 1781 aaPredicted RBP0.3□□□□□ -2.36
CCDC39-206ENST00000489868 H0YAA0 97 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 IAPPP10997 89 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 SPINK9Q5DT21 86 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 LELP1Q5T871 98 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 WFDC13Q8IUB5 93 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 APLNQ9ULZ1 77 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 KIF21BO75037 1637 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 NRXN3Q9Y4C0 1643 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 KIAA1549Q9HCM3 1950 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 C3P01024 1663 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 LRRC37AA6NMS7 1700 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 TIAM2Q8IVF5 1701 aa0.3□□□□□ -2.36
CCDC39-206ENST00000489868 A0A1B0GUL6 1792 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 TRPM7Q96QT4 1865 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 CNTRLQ7Z7A1 2325 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 DEFB130BP0DP73 79 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 DEFB130AP0DP74 79 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 SPRR1AP35321 89 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 RPS27P42677 84 aaKnown RBP0.29□□□□□ -2.36
CCDC39-206ENST00000489868 H1FX-AS1Q4G0G2 97 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 Q5VSD8 79 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 RPS27LQ71UM5 84 aaKnown RBP0.29□□□□□ -2.36
CCDC39-206ENST00000489868 WFDC10BQ8IUB3 73 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 DEFB105AQ8NG35 78 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 SCN3AQ9NY46 2000 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 LY75O60449 1722 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 TJP1Q07157 1748 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 NRAPQ86VF7 1730 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 PARP4Q9UKK3 1724 aaKnown RBP0.29□□□□□ -2.36
CCDC39-206ENST00000489868 SNRNP200O75643 2136 aaKnown RBP0.29□□□□□ -2.36
CCDC39-206ENST00000489868 TET1Q8NFU7 2136 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 SPAG17Q6Q759 2223 aa0.29□□□□□ -2.36
CCDC39-206ENST00000489868 MAP2P11137 1827 aaKnown RBP0.29□□□□□ -2.36
CCDC39-206ENST00000489868 MYH4Q9Y623 1939 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 PAPPA2Q9BXP8 1791 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 A0A0D9SG42 100 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 SPRR1BP22528 89 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 KLK9Q2XQG4 91 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 KAAG1Q9UBP8 84 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 ARFGEF1Q9Y6D6 1849 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 PDCD11Q14690 1871 aaKnown RBP0.28□□□□□ -2.36
CCDC39-206ENST00000489868 UBR3Q6ZT12 1888 aa0.28□□□□□ -2.36
CCDC39-206ENST00000489868 MROH2BQ7Z745 1585 aa0.28□□□□□ -2.37
CCDC39-206ENST00000489868 UNC13CQ8NB66 2214 aa0.28□□□□□ -2.37
CCDC39-206ENST00000489868 BCORQ6W2J9 1755 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 PTPRDP23468 1912 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 CEP192Q8TEP8 1941 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 IGLV5-48A0A075B6I7 105 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 H3BUA1 57 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 PI4KAP42356 2102 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 RPL39P62891 51 aaKnown RBP0.27□□□□□ -2.37
CCDC39-206ENST00000489868 PRLHP81277 87 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 WT1-ASQ06250 92 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 ARHGAP5-AS1Q96IT6 56 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 MED12Q93074 2177 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 ABCA4P78363 2273 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 DUOX1Q9NRD9 1551 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 LMO7Q8WWI1 1683 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 TNRC6CQ9HCJ0 1690 aaKnown RBP0.27□□□□□ -2.37
CCDC39-206ENST00000489868 QSER1Q2KHR3 1735 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 TOGARAM1Q9Y4F4 1720 aa0.27□□□□□ -2.37
CCDC39-206ENST00000489868 CASP8AP2Q9UKL3 1982 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 MYO7BQ6PIF6 2116 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 ZGRF1Q86YA3 2104 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 ZFHX3Q15911 3703 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 MMP24-AS1A0A0U1RRL7 71 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 POLR2KP53803 58 aaKnown RBP0.26□□□□□ -2.37
CCDC39-206ENST00000489868 DEFB131AP59861 70 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 DEFB106AQ8N104 65 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 RPL39LQ96EH5 51 aaKnown RBP0.26□□□□□ -2.37
CCDC39-206ENST00000489868 TTTY10Q9BZA0 68 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 S4R3F8 94 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 IQGAP1P46940 1657 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 DDX60LQ5H9U9 1706 aaKnown RBP0.26□□□□□ -2.37
CCDC39-206ENST00000489868 KIAA0100Q14667 2235 aaKnown RBP0.26□□□□□ -2.37
CCDC39-206ENST00000489868 ZNF462Q96JM2 2506 aa0.26□□□□□ -2.37
CCDC39-206ENST00000489868 DNAJC13O75165 2243 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 HEATR1Q9H583 2144 aaKnown RBP0.25□□□□□ -2.37
CCDC39-206ENST00000489868 PLXNB2O15031 1838 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 TSC2P49815 1807 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 COL14A1Q05707 1796 aaKnown RBP0.25□□□□□ -2.37
CCDC39-206ENST00000489868 C4AP0C0L4 1744 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 DEFB109BQ30KR1 87 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 LEAP2Q969E1 77 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 NOP10Q9NPE3 64 aaKnown RBP0.25□□□□□ -2.37
CCDC39-206ENST00000489868 SPTBP11277 2137 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 DOCK11Q5JSL3 2073 aa0.25□□□□□ -2.37
CCDC39-206ENST00000489868 C4BP0C0L5 1744 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 CDC42BPAQ5VT25 1732 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 A8MTW9 85 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms