RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 LEPROTO15243 131 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 DPM2O94777 84 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 TRGC2P03986 189 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 LGALS3P17931 250 aaKnown RBP4.11□□□□□ -1.75
COL9A1-209ENST00000489861 PRLHP81277 87 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 LINC00337Q8N6G1 96 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 ETDCA0A1B0GVM5 59 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 SPINK1P00995 79 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 SMIM13P0DJ93 91 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 MIR7-3HGQ8N6C7 128 aa4.1□□□□□ -1.75
COL9A1-209ENST00000489861 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
COL9A1-209ENST00000489861 TMEM238C9JI98 176 aa4.09□□□□□ -1.75
COL9A1-209ENST00000489861 SERF1AO75920 110 aa4.09□□□□□ -1.75
COL9A1-209ENST00000489861 IGKCP01834 107 aa4.09□□□□□ -1.75
COL9A1-209ENST00000489861 HINT1P49773 126 aaPredicted RBP4.09□□□□□ -1.75
COL9A1-209ENST00000489861 RPS29P62273 56 aaKnown RBP4.09□□□□□ -1.75
COL9A1-209ENST00000489861 JOSD1Q15040 202 aaPredicted RBP4.09□□□□□ -1.75
COL9A1-209ENST00000489861 KCNQ1DNQ9H478 68 aa4.09□□□□□ -1.75
COL9A1-209ENST00000489861 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
COL9A1-209ENST00000489861 LOC107984156A0A0G2JMH3 177 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 J3QQQ9 107 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 SCO1O75880 301 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 NDUFC2O95298 119 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 AKR1D1P51857 326 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 S100A7L2Q5SY68 101 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 ARL17AQ8IVW1 177 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 COPS9Q8WXC6 57 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
COL9A1-209ENST00000489861 SPANXB1Q9NS25 103 aaPredicted RBP4.08□□□□□ -1.76
COL9A1-209ENST00000489861 NCR3O14931 201 aa4.07□□□□□ -1.76
COL9A1-209ENST00000489861 FABP4P15090 132 aa4.07□□□□□ -1.76
COL9A1-209ENST00000489861 DDTP30046 118 aa4.07□□□□□ -1.76
COL9A1-209ENST00000489861 SPRR1AP35321 89 aa4.07□□□□□ -1.76
COL9A1-209ENST00000489861 DAND5Q8N907 189 aa4.07□□□□□ -1.76
COL9A1-209ENST00000489861 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
COL9A1-209ENST00000489861 C5orf52A6NGY3 159 aa4.06□□□□□ -1.76
COL9A1-209ENST00000489861 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
COL9A1-209ENST00000489861 SSBP3-AS1Q7Z2R9 100 aa4.06□□□□□ -1.76
COL9A1-209ENST00000489861 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
COL9A1-209ENST00000489861 TRBV10-3A0A0K0K1G6 114 aa4.05□□□□□ -1.76
COL9A1-209ENST00000489861 COLCA2A8K830 154 aa4.05□□□□□ -1.76
COL9A1-209ENST00000489861 E9PLD3 99 aa4.05□□□□□ -1.76
COL9A1-209ENST00000489861 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
COL9A1-209ENST00000489861 SMCR5Q8TEV8 140 aa4.05□□□□□ -1.76
COL9A1-209ENST00000489861 TRAV23DV6A0A075B6W5 121 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 C20orf202A1L168 122 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 SLC25A20O43772 301 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 TIMM17BO60830 172 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 PET117Q6UWS5 81 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 C3orf22Q8N5N4 141 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 Q8NBF4 154 aa4.04□□□□□ -1.76
COL9A1-209ENST00000489861 B5MCH6 92 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 SYS1-DBNDD2H3BUS1 97 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 LINC00483Q53H64 154 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 Q6ZRX8 168 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 SLC7A5P1Q8MH63 180 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 LINC00518Q8N0U6 118 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 Q8NDZ9 215 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 LIMD2Q9BT23 127 aa4.03□□□□□ -1.76
COL9A1-209ENST00000489861 A0A0J9YXY3 114 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 ZNF73O43830 326 aaPredicted RBP4.02□□□□□ -1.77
COL9A1-209ENST00000489861 IGLV6-57P01721 117 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 LINC00310P59036 64 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 TSPEAR-AS2P59090 65 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 GAGE2AQ6NT46 116 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 PMCHL2Q9BQD1 86 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 SPANXCQ9NY87 97 aa4.02□□□□□ -1.77
COL9A1-209ENST00000489861 MOBPQ13875 183 aa4.01□□□□□ -1.77
COL9A1-209ENST00000489861 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
COL9A1-209ENST00000489861 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
COL9A1-209ENST00000489861 LINC01545Q5VT33 79 aa4.01□□□□□ -1.77
COL9A1-209ENST00000489861 SPANXDQ9BXN6 97 aa4.01□□□□□ -1.77
COL9A1-209ENST00000489861 DHRS4-AS1Q9P1J3 65 aa4.01□□□□□ -1.77
COL9A1-209ENST00000489861 IGLV9-49A0A0B4J1Y8 123 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 ZNF815PA8K554 130 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BKO60814 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BJP06899 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BOP23527 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BBP33778 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BDP58876 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 SNRPEP62304 92 aaKnown RBP4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BCP62807 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST2H2BEQ16778 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST2H2BFQ5QNW6 126 aaPredicted RBP4□□□□□ -1.77
COL9A1-209ENST00000489861 Q6ZVH6 145 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 OR13C6PQ8NH95 151 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BHQ93079 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BNQ99877 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 HIST1H2BMQ99879 126 aa4□□□□□ -1.77
COL9A1-209ENST00000489861 IFITM1P13164 125 aa3.99□□□□□ -1.77
COL9A1-209ENST00000489861 SCGB1D4Q6XE38 83 aa3.99□□□□□ -1.77
COL9A1-209ENST00000489861 LINC00308Q8TCZ7 52 aa3.99□□□□□ -1.77
COL9A1-209ENST00000489861 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
COL9A1-209ENST00000489861 IGLV8-61A0A075B6I0 122 aa3.98□□□□□ -1.77
COL9A1-209ENST00000489861 NPC2P61916 151 aa3.98□□□□□ -1.77
COL9A1-209ENST00000489861 LAMTOR3Q9UHA4 124 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms