RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.9
SMIM11A-206ENST00000489469 UBE2AP49459 152 aa9.45□□□□□ -0.9
SMIM11A-206ENST00000489469 SLC25A34Q6PIV7 304 aa9.45□□□□□ -0.9
SMIM11A-206ENST00000489469 MUSTN1Q8IVN3 82 aa9.45□□□□□ -0.9
SMIM11A-206ENST00000489469 C14orf144Q96I85 54 aa9.45□□□□□ -0.9
SMIM11A-206ENST00000489469 PCLOQ9Y6V0 5065 aa9.44□□□□□ -0.9
SMIM11A-206ENST00000489469 OXTP01178 125 aa9.44□□□□□ -0.9
SMIM11A-206ENST00000489469 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
SMIM11A-206ENST00000489469 H0Y9J4 135 aa9.43□□□□□ -0.9
SMIM11A-206ENST00000489469 FAM19A1Q7Z5A9 133 aa9.43□□□□□ -0.9
SMIM11A-206ENST00000489469 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
SMIM11A-206ENST00000489469 KRTAP29-1A8MX34 341 aaPredicted RBP9.42□□□□□ -0.9
SMIM11A-206ENST00000489469 SPRR1AP35321 89 aa9.42□□□□□ -0.9
SMIM11A-206ENST00000489469 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
SMIM11A-206ENST00000489469 KRTAP13-1Q8IUC0 172 aa9.41□□□□□ -0.9
SMIM11A-206ENST00000489469 OR13C6PQ8NH95 151 aa9.41□□□□□ -0.9
SMIM11A-206ENST00000489469 HIST1H4GQ99525 98 aa9.41□□□□□ -0.9
SMIM11A-206ENST00000489469 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
SMIM11A-206ENST00000489469 ETDCA0A1B0GVM5 59 aa9.4□□□□□ -0.9
SMIM11A-206ENST00000489469 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.91
SMIM11A-206ENST00000489469 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
SMIM11A-206ENST00000489469 PRLHP81277 87 aa9.38□□□□□ -0.91
SMIM11A-206ENST00000489469 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
SMIM11A-206ENST00000489469 KRTAP4-16G5E9R7 235 aaPredicted RBP9.37□□□□□ -0.91
SMIM11A-206ENST00000489469 ZNF73O43830 326 aaPredicted RBP9.37□□□□□ -0.91
SMIM11A-206ENST00000489469 SMIM6P0DI80 62 aa9.36□□□□□ -0.91
SMIM11A-206ENST00000489469 HINT1P49773 126 aaPredicted RBP9.36□□□□□ -0.91
SMIM11A-206ENST00000489469 TAL2Q16559 108 aa9.36□□□□□ -0.91
SMIM11A-206ENST00000489469 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
SMIM11A-206ENST00000489469 A4D1N5 150 aa9.35□□□□□ -0.91
SMIM11A-206ENST00000489469 A6NDN8 102 aa9.35□□□□□ -0.91
SMIM11A-206ENST00000489469 C2orf91Q6ZV80 131 aa9.35□□□□□ -0.91
SMIM11A-206ENST00000489469 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
SMIM11A-206ENST00000489469 B5MCH6 92 aa9.33□□□□□ -0.92
SMIM11A-206ENST00000489469 Q6ZRX8 168 aa9.33□□□□□ -0.92
SMIM11A-206ENST00000489469 HIGD2AQ9BW72 106 aa9.33□□□□□ -0.92
SMIM11A-206ENST00000489469 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
SMIM11A-206ENST00000489469 KRTAP9-2Q9BYQ4 174 aa9.3□□□□□ -0.92
SMIM11A-206ENST00000489469 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
SMIM11A-206ENST00000489469 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
SMIM11A-206ENST00000489469 FAT3Q8TDW7 4589 aa9.29□□□□□ -0.92
SMIM11A-206ENST00000489469 TRBV7-6A0A0J9YX20 115 aa9.29□□□□□ -0.92
SMIM11A-206ENST00000489469 LOC105371267A0A1B0GV96 52 aa9.29□□□□□ -0.92
SMIM11A-206ENST00000489469 CEND1Q8N111 149 aa9.29□□□□□ -0.92
SMIM11A-206ENST00000489469 RPL13AP40429 203 aaKnown RBP9.28□□□□□ -0.92
SMIM11A-206ENST00000489469 HSD52Q0P140 79 aa9.28□□□□□ -0.92
SMIM11A-206ENST00000489469 C6orf99Q4VX62 202 aa9.28□□□□□ -0.92
SMIM11A-206ENST00000489469 SMCR5Q8TEV8 140 aa9.28□□□□□ -0.92
SMIM11A-206ENST00000489469 COX7BP24311 80 aa9.27□□□□□ -0.93
SMIM11A-206ENST00000489469 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
SMIM11A-206ENST00000489469 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
SMIM11A-206ENST00000489469 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
SMIM11A-206ENST00000489469 ELOF1P60002 83 aaKnown RBP9.26□□□□□ -0.93
SMIM11A-206ENST00000489469 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
SMIM11A-206ENST00000489469 Q9BRP9 147 aa9.26□□□□□ -0.93
SMIM11A-206ENST00000489469 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
SMIM11A-206ENST00000489469 A0A0B4J2C4 111 aa9.25□□□□□ -0.93
SMIM11A-206ENST00000489469 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.25□□□□□ -0.93
SMIM11A-206ENST00000489469 CRYGAP11844 174 aa9.25□□□□□ -0.93
SMIM11A-206ENST00000489469 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
SMIM11A-206ENST00000489469 SMIM11BQ8TCY0 68 aa9.25□□□□□ -0.93
SMIM11A-206ENST00000489469 C12orf57Q99622 126 aa9.25□□□□□ -0.93
SMIM11A-206ENST00000489469 KRTAP9-6A0A140TA67 174 aa9.24□□□□□ -0.93
SMIM11A-206ENST00000489469 CFC1BP0CG36 223 aa9.24□□□□□ -0.93
SMIM11A-206ENST00000489469 CFC1P0CG37 223 aa9.24□□□□□ -0.93
SMIM11A-206ENST00000489469 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
SMIM11A-206ENST00000489469 KRTAP4-12Q9BQ66 201 aa9.24□□□□□ -0.93
SMIM11A-206ENST00000489469 VAMP3Q15836 100 aa9.23□□□□□ -0.93
SMIM11A-206ENST00000489469 PRR26Q8N8Z3 221 aa9.23□□□□□ -0.93
SMIM11A-206ENST00000489469 FXYD2P54710 66 aa9.22□□□□□ -0.93
SMIM11A-206ENST00000489469 PRO1933Q9H354 126 aa9.21□□□□□ -0.94
SMIM11A-206ENST00000489469 NHP2Q9NX24 153 aaKnown RBP9.21□□□□□ -0.94
SMIM11A-206ENST00000489469 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
SMIM11A-206ENST00000489469 A0A087X002 238 aa9.19□□□□□ -0.94
SMIM11A-206ENST00000489469 TSTD3H0UI37 97 aa9.19□□□□□ -0.94
SMIM11A-206ENST00000489469 BVES-AS1Q5T3Y7 98 aa9.19□□□□□ -0.94
SMIM11A-206ENST00000489469 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
SMIM11A-206ENST00000489469 PRO1854Q9UHT4 67 aa9.19□□□□□ -0.94
SMIM11A-206ENST00000489469 SLC25A20O43772 301 aa9.18□□□□□ -0.94
SMIM11A-206ENST00000489469 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
SMIM11A-206ENST00000489469 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
SMIM11A-206ENST00000489469 TNXBP22105 4242 aa9.17□□□□□ -0.94
SMIM11A-206ENST00000489469 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
SMIM11A-206ENST00000489469 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
SMIM11A-206ENST00000489469 H7C2G1 150 aa9.16□□□□□ -0.94
SMIM11A-206ENST00000489469 Q1RN00 199 aa9.16□□□□□ -0.94
SMIM11A-206ENST00000489469 M0R143 59 aa9.14□□□□□ -0.95
SMIM11A-206ENST00000489469 H0YGX0 51 aa9.13□□□□□ -0.95
SMIM11A-206ENST00000489469 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
SMIM11A-206ENST00000489469 LCE3BQ5TA77 95 aa9.13□□□□□ -0.95
SMIM11A-206ENST00000489469 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
SMIM11A-206ENST00000489469 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
SMIM11A-206ENST00000489469 SPRR1BP22528 89 aa9.12□□□□□ -0.95
SMIM11A-206ENST00000489469 CTAG1AP78358 180 aa9.12□□□□□ -0.95
SMIM11A-206ENST00000489469 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
SMIM11A-206ENST00000489469 SNCGO76070 127 aa9.11□□□□□ -0.95
SMIM11A-206ENST00000489469 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
SMIM11A-206ENST00000489469 C3orf22Q8N5N4 141 aa9.1□□□□□ -0.95
SMIM11A-206ENST00000489469 K7ERJ3 54 aa9.09□□□□□ -0.95
SMIM11A-206ENST00000489469 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms