RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 GPR98Q8WXG9 6306 aa7.31□□□□□ -1.24
UFD1-209ENST00000489406 DDTP30046 118 aa7.31□□□□□ -1.24
UFD1-209ENST00000489406 PRO1933Q9H354 126 aa7.31□□□□□ -1.24
UFD1-209ENST00000489406 ATP6V1G1O75348 118 aa7.3□□□□□ -1.24
UFD1-209ENST00000489406 SPRR1BP22528 89 aa7.3□□□□□ -1.24
UFD1-209ENST00000489406 PCP2Q8IVA1 136 aa7.3□□□□□ -1.24
UFD1-209ENST00000489406 KRTAP2-2Q9BYT5 123 aa7.3□□□□□ -1.24
UFD1-209ENST00000489406 KRTAP2-1Q9BYU5 128 aa7.3□□□□□ -1.24
UFD1-209ENST00000489406 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
UFD1-209ENST00000489406 SMIM13P0DJ93 91 aa7.28□□□□□ -1.24
UFD1-209ENST00000489406 SFTA2Q6UW10 78 aa7.28□□□□□ -1.24
UFD1-209ENST00000489406 NXT2Q9NPJ8 142 aaKnown RBP7.28□□□□□ -1.24
UFD1-209ENST00000489406 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
UFD1-209ENST00000489406 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
UFD1-209ENST00000489406 ADIRFQ15847 76 aa7.27□□□□□ -1.25
UFD1-209ENST00000489406 MIR7-3HGQ8N6C7 128 aa7.27□□□□□ -1.25
UFD1-209ENST00000489406 A6NN06 94 aa7.25□□□□□ -1.25
UFD1-209ENST00000489406 IGLC3P0DOY3 106 aa7.25□□□□□ -1.25
UFD1-209ENST00000489406 LOC107984156A0A0G2JMH3 177 aa7.24□□□□□ -1.25
UFD1-209ENST00000489406 ARL17AQ8IVW1 177 aa7.24□□□□□ -1.25
UFD1-209ENST00000489406 SRP19P09132 144 aaKnown RBP7.23□□□□□ -1.25
UFD1-209ENST00000489406 AKR1D1P51857 326 aa7.23□□□□□ -1.25
UFD1-209ENST00000489406 Q6ZVH6 145 aa7.23□□□□□ -1.25
UFD1-209ENST00000489406 H3BS24 57 aa7.22□□□□□ -1.25
UFD1-209ENST00000489406 ATP5L2Q7Z4Y8 100 aa7.22□□□□□ -1.25
UFD1-209ENST00000489406 TCL1BO95988 128 aa7.21□□□□□ -1.26
UFD1-209ENST00000489406 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.26
UFD1-209ENST00000489406 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
UFD1-209ENST00000489406 Q96NJ1 140 aa7.21□□□□□ -1.26
UFD1-209ENST00000489406 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
UFD1-209ENST00000489406 TRAV23DV6A0A075B6W5 121 aa7.2□□□□□ -1.26
UFD1-209ENST00000489406 TRBV10-2A0A0K0K1G8 114 aa7.18□□□□□ -1.26
UFD1-209ENST00000489406 ZNF73O43830 326 aaPredicted RBP7.18□□□□□ -1.26
UFD1-209ENST00000489406 NDUFA6P56556 154 aa7.18□□□□□ -1.26
UFD1-209ENST00000489406 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
UFD1-209ENST00000489406 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
UFD1-209ENST00000489406 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
UFD1-209ENST00000489406 NAT8Q9UHE5 227 aa7.17□□□□□ -1.26
UFD1-209ENST00000489406 BLOC1S1P78537 153 aa7.16□□□□□ -1.26
UFD1-209ENST00000489406 TMEM170BQ5T4T1 132 aa7.16□□□□□ -1.26
UFD1-209ENST00000489406 TAL2Q16559 108 aa7.15□□□□□ -1.26
UFD1-209ENST00000489406 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
UFD1-209ENST00000489406 LINC01549A6NIU2 74 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 A8MWP4 228 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 HRES1P13985 223 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 SPRR2EP22531 72 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 SPRR2BP35325 72 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 SPRR2AP35326 72 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 SLC51BQ86UW2 128 aa7.14□□□□□ -1.27
UFD1-209ENST00000489406 C11orf86A6NJI1 115 aa7.13□□□□□ -1.27
UFD1-209ENST00000489406 IGFL1Q6UW32 110 aa7.13□□□□□ -1.27
UFD1-209ENST00000489406 A8MUU9 505 aa7.12□□□□□ -1.27
UFD1-209ENST00000489406 HINT1P49773 126 aaPredicted RBP7.12□□□□□ -1.27
UFD1-209ENST00000489406 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
UFD1-209ENST00000489406 SPANXB1Q9NS25 103 aaPredicted RBP7.12□□□□□ -1.27
UFD1-209ENST00000489406 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
UFD1-209ENST00000489406 DHRS4-AS1Q9P1J3 65 aa7.1□□□□□ -1.27
UFD1-209ENST00000489406 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
UFD1-209ENST00000489406 MAP1LC3CQ9BXW4 147 aa7.08□□□□□ -1.28
UFD1-209ENST00000489406 HERV-K104P63124 156 aa7.07□□□□□ -1.28
UFD1-209ENST00000489406 LINC00587B1AMM8 73 aa7.06□□□□□ -1.28
UFD1-209ENST00000489406 KRTAP9-9Q9BYP9 154 aa7.05□□□□□ -1.28
UFD1-209ENST00000489406 KRTAP9-4Q9BYQ2 154 aa7.05□□□□□ -1.28
UFD1-209ENST00000489406 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
UFD1-209ENST00000489406 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
UFD1-209ENST00000489406 C9JQL5 133 aa7.04□□□□□ -1.28
UFD1-209ENST00000489406 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
UFD1-209ENST00000489406 NDUFC2O95298 119 aa7.02□□□□□ -1.29
UFD1-209ENST00000489406 NOTCH2NLQ7Z3S9 236 aa7.02□□□□□ -1.29
UFD1-209ENST00000489406 MIEN1Q9BRT3 115 aa7.02□□□□□ -1.29
UFD1-209ENST00000489406 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
UFD1-209ENST00000489406 MTURNQ8N3F0 131 aa7□□□□□ -1.29
UFD1-209ENST00000489406 HBDP02042 147 aa6.99□□□□□ -1.29
UFD1-209ENST00000489406 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
UFD1-209ENST00000489406 MYMXA0A1B0GTQ4 84 aa6.98□□□□□ -1.29
UFD1-209ENST00000489406 SMCO4Q9NRQ5 59 aa6.98□□□□□ -1.29
UFD1-209ENST00000489406 CBY1Q9Y3M2 126 aa6.98□□□□□ -1.29
UFD1-209ENST00000489406 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
UFD1-209ENST00000489406 COX7BP24311 80 aa6.96□□□□□ -1.3
UFD1-209ENST00000489406 ELOF1P60002 83 aaKnown RBP6.96□□□□□ -1.3
UFD1-209ENST00000489406 A0A096LNJ9 63 aa6.95□□□□□ -1.3
UFD1-209ENST00000489406 RGS21Q2M5E4 152 aa6.95□□□□□ -1.3
UFD1-209ENST00000489406 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
UFD1-209ENST00000489406 MT1BP07438 61 aa6.94□□□□□ -1.3
UFD1-209ENST00000489406 NPC2P61916 151 aa6.94□□□□□ -1.3
UFD1-209ENST00000489406 IGLV5-48A0A075B6I7 105 aa6.93□□□□□ -1.3
UFD1-209ENST00000489406 OR13C6PQ8NH95 151 aa6.93□□□□□ -1.3
UFD1-209ENST00000489406 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
UFD1-209ENST00000489406 RPS10P5Q9NQ39 176 aa6.92□□□□□ -1.3
UFD1-209ENST00000489406 SPRR2DP22532 72 aa6.91□□□□□ -1.3
UFD1-209ENST00000489406 RHEBQ15382 184 aa6.91□□□□□ -1.3
UFD1-209ENST00000489406 LST1O00453 97 aa6.9□□□□□ -1.3
UFD1-209ENST00000489406 LCE1AQ5T7P2 110 aa6.9□□□□□ -1.3
UFD1-209ENST00000489406 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
UFD1-209ENST00000489406 DSCR10P59022 87 aa6.89□□□□□ -1.31
UFD1-209ENST00000489406 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
UFD1-209ENST00000489406 PEA15Q15121 130 aa6.88□□□□□ -1.31
UFD1-209ENST00000489406 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
UFD1-209ENST00000489406 F8WEM9 126 aa6.85□□□□□ -1.31
UFD1-209ENST00000489406 Q5VV11 94 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms