RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 HIST1H2BCP62807 126 aa6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 MOBPQ13875 183 aa6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 HIST2H2BEQ16778 126 aa6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 HIST1H2BHQ93079 126 aa6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 HIST1H2BNQ99877 126 aa6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 HIST1H2BMQ99879 126 aa6.78□□□□□ -1.32
CCHCR1-215ENST00000488920 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
CCHCR1-215ENST00000488920 SPINK1P00995 79 aa6.77□□□□□ -1.33
CCHCR1-215ENST00000488920 ZNF73O43830 326 aaPredicted RBP6.76□□□□□ -1.33
CCHCR1-215ENST00000488920 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
CCHCR1-215ENST00000488920 JOSD1Q15040 202 aaPredicted RBP6.75□□□□□ -1.33
CCHCR1-215ENST00000488920 LINC01545Q5VT33 79 aa6.75□□□□□ -1.33
CCHCR1-215ENST00000488920 SSBP3-AS1Q7Z2R9 100 aa6.75□□□□□ -1.33
CCHCR1-215ENST00000488920 LITAFQ99732 161 aa6.75□□□□□ -1.33
CCHCR1-215ENST00000488920 PET117Q6UWS5 81 aa6.74□□□□□ -1.33
CCHCR1-215ENST00000488920 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
CCHCR1-215ENST00000488920 OR13C6PQ8NH95 151 aa6.74□□□□□ -1.33
CCHCR1-215ENST00000488920 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
CCHCR1-215ENST00000488920 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
CCHCR1-215ENST00000488920 TTTY13Q9BZ97 58 aa6.73□□□□□ -1.33
CCHCR1-215ENST00000488920 TIMM17BO60830 172 aa6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 HINT1P49773 126 aaPredicted RBP6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 SPANXCQ9NY87 97 aa6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
CCHCR1-215ENST00000488920 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.34
CCHCR1-215ENST00000488920 Q8N377 158 aa6.71□□□□□ -1.34
CCHCR1-215ENST00000488920 CBY1Q9Y3M2 126 aa6.71□□□□□ -1.34
CCHCR1-215ENST00000488920 KRTDAPP60985 99 aa6.7□□□□□ -1.34
CCHCR1-215ENST00000488920 SLC25A20O43772 301 aa6.69□□□□□ -1.34
CCHCR1-215ENST00000488920 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
CCHCR1-215ENST00000488920 C5orf52A6NGY3 159 aa6.68□□□□□ -1.34
CCHCR1-215ENST00000488920 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
CCHCR1-215ENST00000488920 SPANXDQ9BXN6 97 aa6.68□□□□□ -1.34
CCHCR1-215ENST00000488920 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
CCHCR1-215ENST00000488920 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
CCHCR1-215ENST00000488920 C6orf99Q4VX62 202 aa6.66□□□□□ -1.34
CCHCR1-215ENST00000488920 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
CCHCR1-215ENST00000488920 LINC00518Q8N0U6 118 aa6.66□□□□□ -1.34
CCHCR1-215ENST00000488920 SPRR1BP22528 89 aa6.65□□□□□ -1.34
CCHCR1-215ENST00000488920 COX7BP24311 80 aa6.65□□□□□ -1.34
CCHCR1-215ENST00000488920 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
CCHCR1-215ENST00000488920 ANKRD39Q53RE8 183 aa6.65□□□□□ -1.34
CCHCR1-215ENST00000488920 ATOH7Q8N100 152 aa6.65□□□□□ -1.34
CCHCR1-215ENST00000488920 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
CCHCR1-215ENST00000488920 C20orf202A1L168 122 aa6.64□□□□□ -1.35
CCHCR1-215ENST00000488920 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
CCHCR1-215ENST00000488920 HRCT1Q6UXD1 115 aa6.64□□□□□ -1.35
CCHCR1-215ENST00000488920 DEFB105AQ8NG35 78 aa6.64□□□□□ -1.35
CCHCR1-215ENST00000488920 TAL2Q16559 108 aa6.63□□□□□ -1.35
CCHCR1-215ENST00000488920 SLC25A34Q6PIV7 304 aa6.63□□□□□ -1.35
CCHCR1-215ENST00000488920 LAMTOR3Q9UHA4 124 aa6.63□□□□□ -1.35
CCHCR1-215ENST00000488920 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
CCHCR1-215ENST00000488920 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
CCHCR1-215ENST00000488920 A6NDN8 102 aa6.61□□□□□ -1.35
CCHCR1-215ENST00000488920 IFITM1P13164 125 aa6.61□□□□□ -1.35
CCHCR1-215ENST00000488920 Q1RN00 199 aa6.61□□□□□ -1.35
CCHCR1-215ENST00000488920 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
CCHCR1-215ENST00000488920 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
CCHCR1-215ENST00000488920 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
CCHCR1-215ENST00000488920 TRBV7-6A0A0J9YX20 115 aa6.59□□□□□ -1.35
CCHCR1-215ENST00000488920 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
CCHCR1-215ENST00000488920 XP32Q5T750 250 aa6.59□□□□□ -1.35
CCHCR1-215ENST00000488920 Q6ZVH6 145 aa6.59□□□□□ -1.35
CCHCR1-215ENST00000488920 TMA7Q9Y2S6 64 aaKnown RBP6.59□□□□□ -1.35
CCHCR1-215ENST00000488920 A0A1B0GWB2 263 aa6.58□□□□□ -1.36
CCHCR1-215ENST00000488920 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
CCHCR1-215ENST00000488920 PRO1933Q9H354 126 aa6.57□□□□□ -1.36
CCHCR1-215ENST00000488920 AKR1D1P51857 326 aa6.56□□□□□ -1.36
CCHCR1-215ENST00000488920 SMIM29Q86T20 159 aa6.56□□□□□ -1.36
CCHCR1-215ENST00000488920 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
CCHCR1-215ENST00000488920 H7C2G1 150 aa6.55□□□□□ -1.36
CCHCR1-215ENST00000488920 LINC01547P58512 204 aaPredicted RBP6.55□□□□□ -1.36
CCHCR1-215ENST00000488920 SNRPEP62304 92 aaKnown RBP6.55□□□□□ -1.36
CCHCR1-215ENST00000488920 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
CCHCR1-215ENST00000488920 IGLV5-48A0A075B6I7 105 aa6.54□□□□□ -1.36
CCHCR1-215ENST00000488920 TRAV13-2A0A0B4J235 113 aa6.54□□□□□ -1.36
CCHCR1-215ENST00000488920 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
CCHCR1-215ENST00000488920 CD164Q04900 197 aa6.54□□□□□ -1.36
CCHCR1-215ENST00000488920 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
CCHCR1-215ENST00000488920 A4D1N5 150 aa6.53□□□□□ -1.36
CCHCR1-215ENST00000488920 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
CCHCR1-215ENST00000488920 S100A2P29034 98 aa6.52□□□□□ -1.37
CCHCR1-215ENST00000488920 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
CCHCR1-215ENST00000488920 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
CCHCR1-215ENST00000488920 HSBP1L1C9JCN9 74 aa6.5□□□□□ -1.37
CCHCR1-215ENST00000488920 VAMP3Q15836 100 aa6.5□□□□□ -1.37
CCHCR1-215ENST00000488920 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
CCHCR1-215ENST00000488920 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
CCHCR1-215ENST00000488920 C1orf195Q5TG92 126 aa6.49□□□□□ -1.37
CCHCR1-215ENST00000488920 Q5XG85 94 aa6.48□□□□□ -1.37
CCHCR1-215ENST00000488920 LINC00575Q6W349 94 aa6.48□□□□□ -1.37
CCHCR1-215ENST00000488920 IGLV8-61A0A075B6I0 122 aa6.46□□□□□ -1.38
CCHCR1-215ENST00000488920 S100A6P06703 90 aa6.46□□□□□ -1.38
CCHCR1-215ENST00000488920 hADV29S1A0JD25 119 aa6.45□□□□□ -1.38
CCHCR1-215ENST00000488920 F8WEM9 126 aa6.45□□□□□ -1.38
CCHCR1-215ENST00000488920 SCGB1D1O95968 90 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms