RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 Q6ZRX8 168 aa13.04□□□□□ -0.32
VAMP2-204ENST00000488857 LINC00304Q8N9R0 145 aa13.04□□□□□ -0.32
VAMP2-204ENST00000488857 CTAG1AP78358 180 aa13.03□□□□□ -0.32
VAMP2-204ENST00000488857 ATOH7Q8N100 152 aa13.02□□□□□ -0.33
VAMP2-204ENST00000488857 HIST1H2BLQ99880 126 aa13.02□□□□□ -0.33
VAMP2-204ENST00000488857 CBY1Q9Y3M2 126 aa13.02□□□□□ -0.33
VAMP2-204ENST00000488857 LINC00483Q53H64 154 aa13.01□□□□□ -0.33
VAMP2-204ENST00000488857 C3orf22Q8N5N4 141 aa13.01□□□□□ -0.33
VAMP2-204ENST00000488857 Q9BRP9 147 aa13.01□□□□□ -0.33
VAMP2-204ENST00000488857 ZNF73O43830 326 aaPredicted RBP13□□□□□ -0.33
VAMP2-204ENST00000488857 SNRPEP62304 92 aaKnown RBP13□□□□□ -0.33
VAMP2-204ENST00000488857 SPANXDQ9BXN6 97 aa13□□□□□ -0.33
VAMP2-204ENST00000488857 S100A2P29034 98 aa12.99□□□□□ -0.33
VAMP2-204ENST00000488857 PRR4Q16378 134 aa12.99□□□□□ -0.33
VAMP2-204ENST00000488857 SCGB1D4Q6XE38 83 aa12.99□□□□□ -0.33
VAMP2-204ENST00000488857 ERC2-IT1O76042 136 aa12.98□□□□□ -0.33
VAMP2-204ENST00000488857 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
VAMP2-204ENST00000488857 JOSD1Q15040 202 aaPredicted RBP12.97□□□□□ -0.33
VAMP2-204ENST00000488857 PCP2Q8IVA1 136 aa12.96□□□□□ -0.33
VAMP2-204ENST00000488857 LINC00518Q8N0U6 118 aa12.96□□□□□ -0.33
VAMP2-204ENST00000488857 S100A6P06703 90 aa12.95□□□□□ -0.34
VAMP2-204ENST00000488857 Q6ZVH6 145 aa12.95□□□□□ -0.34
VAMP2-204ENST00000488857 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
VAMP2-204ENST00000488857 IFITM1P13164 125 aa12.93□□□□□ -0.34
VAMP2-204ENST00000488857 SPAG11AQ6PDA7 123 aa12.93□□□□□ -0.34
VAMP2-204ENST00000488857 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
VAMP2-204ENST00000488857 HINT1P49773 126 aaPredicted RBP12.92□□□□□ -0.34
VAMP2-204ENST00000488857 GAGE2AQ6NT46 116 aa12.92□□□□□ -0.34
VAMP2-204ENST00000488857 C5orf52A6NGY3 159 aa12.9□□□□□ -0.34
VAMP2-204ENST00000488857 RNF213Q63HN8 5207 aa12.9□□□□□ -0.34
VAMP2-204ENST00000488857 Q8NBF4 154 aa12.87□□□□□ -0.35
VAMP2-204ENST00000488857 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
VAMP2-204ENST00000488857 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
VAMP2-204ENST00000488857 DHRS4-AS1Q9P1J3 65 aa12.85□□□□□ -0.35
VAMP2-204ENST00000488857 ELOF1P60002 83 aaKnown RBP12.84□□□□□ -0.35
VAMP2-204ENST00000488857 C4orf48Q5BLP8 95 aa12.84□□□□□ -0.35
VAMP2-204ENST00000488857 RETNLBQ9BQ08 111 aa12.84□□□□□ -0.35
VAMP2-204ENST00000488857 SSBP3-AS1Q7Z2R9 100 aa12.83□□□□□ -0.36
VAMP2-204ENST00000488857 TRBV7-6A0A0J9YX20 115 aa12.82□□□□□ -0.36
VAMP2-204ENST00000488857 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
VAMP2-204ENST00000488857 ST20-AS1Q8NBB2 130 aa12.82□□□□□ -0.36
VAMP2-204ENST00000488857 IGLV9-49A0A0B4J1Y8 123 aa12.81□□□□□ -0.36
VAMP2-204ENST00000488857 SPINK1P00995 79 aa12.81□□□□□ -0.36
VAMP2-204ENST00000488857 MOBPQ13875 183 aa12.81□□□□□ -0.36
VAMP2-204ENST00000488857 COX7BP24311 80 aa12.8□□□□□ -0.36
VAMP2-204ENST00000488857 SPRR1BP22528 89 aa12.79□□□□□ -0.36
VAMP2-204ENST00000488857 A6NDN8 102 aa12.78□□□□□ -0.36
VAMP2-204ENST00000488857 SCGB1D1O95968 90 aa12.77□□□□□ -0.37
VAMP2-204ENST00000488857 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
VAMP2-204ENST00000488857 RPS29P62273 56 aaKnown RBP12.76□□□□□ -0.37
VAMP2-204ENST00000488857 IGLV7-46A0A075B6I9 117 aa12.75□□□□□ -0.37
VAMP2-204ENST00000488857 A0A1B0GWB2 263 aa12.75□□□□□ -0.37
VAMP2-204ENST00000488857 TPRXLQ17RH7 258 aa12.75□□□□□ -0.37
VAMP2-204ENST00000488857 SLC25A34Q6PIV7 304 aa12.73□□□□□ -0.37
VAMP2-204ENST00000488857 FP248Q71RG6 208 aaPredicted RBP12.73□□□□□ -0.37
VAMP2-204ENST00000488857 C9orf153Q5TBE3 101 aa12.71□□□□□ -0.37
VAMP2-204ENST00000488857 A4D1N5 150 aa12.7□□□□□ -0.38
VAMP2-204ENST00000488857 COX8AP10176 69 aa12.69□□□□□ -0.38
VAMP2-204ENST00000488857 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
VAMP2-204ENST00000488857 DLEU1O43261 78 aa12.68□□□□□ -0.38
VAMP2-204ENST00000488857 Q8N377 158 aa12.67□□□□□ -0.38
VAMP2-204ENST00000488857 LAMTOR3Q9UHA4 124 aa12.67□□□□□ -0.38
VAMP2-204ENST00000488857 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
VAMP2-204ENST00000488857 IGLV5-48A0A075B6I7 105 aa12.64□□□□□ -0.39
VAMP2-204ENST00000488857 TAL2Q16559 108 aa12.64□□□□□ -0.39
VAMP2-204ENST00000488857 CDIP1Q9H305 208 aa12.64□□□□□ -0.39
VAMP2-204ENST00000488857 SLC25A20O43772 301 aa12.63□□□□□ -0.39
VAMP2-204ENST00000488857 NHP2Q9NX24 153 aaKnown RBP12.63□□□□□ -0.39
VAMP2-204ENST00000488857 LINC01547P58512 204 aaPredicted RBP12.62□□□□□ -0.39
VAMP2-204ENST00000488857 HIST1H4GQ99525 98 aa12.62□□□□□ -0.39
VAMP2-204ENST00000488857 DEFB105AQ8NG35 78 aa12.61□□□□□ -0.39
VAMP2-204ENST00000488857 MUC2Q02817 5179 aa12.61□□□□□ -0.39
VAMP2-204ENST00000488857 VAMP3Q15836 100 aa12.59□□□□□ -0.39
VAMP2-204ENST00000488857 SMIM29Q86T20 159 aa12.59□□□□□ -0.39
VAMP2-204ENST00000488857 Q1RN00 199 aa12.58□□□□□ -0.4
VAMP2-204ENST00000488857 KRTAP13-3Q3SY46 172 aa12.58□□□□□ -0.4
VAMP2-204ENST00000488857 SPATA45Q537H7 98 aa12.58□□□□□ -0.4
VAMP2-204ENST00000488857 HIGD1BQ9P298 99 aa12.58□□□□□ -0.4
VAMP2-204ENST00000488857 PAM16Q9Y3D7 125 aa12.58□□□□□ -0.4
VAMP2-204ENST00000488857 C14orf144Q96I85 54 aa12.57□□□□□ -0.4
VAMP2-204ENST00000488857 VAMP8Q9BV40 100 aa12.56□□□□□ -0.4
VAMP2-204ENST00000488857 LINC00575Q6W349 94 aa12.55□□□□□ -0.4
VAMP2-204ENST00000488857 CD164Q04900 197 aa12.54□□□□□ -0.4
VAMP2-204ENST00000488857 PRO1933Q9H354 126 aa12.54□□□□□ -0.4
VAMP2-204ENST00000488857 C12orf57Q99622 126 aa12.53□□□□□ -0.4
VAMP2-204ENST00000488857 LIMD2Q9BT23 127 aa12.53□□□□□ -0.4
VAMP2-204ENST00000488857 MUC17Q685J3 4493 aa12.52□□□□□ -0.4
VAMP2-204ENST00000488857 C2orf91Q6ZV80 131 aa12.51□□□□□ -0.41
VAMP2-204ENST00000488857 hADV29S1A0JD25 119 aa12.49□□□□□ -0.41
VAMP2-204ENST00000488857 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
VAMP2-204ENST00000488857 CFC1BP0CG36 223 aa12.48□□□□□ -0.41
VAMP2-204ENST00000488857 CFC1P0CG37 223 aa12.48□□□□□ -0.41
VAMP2-204ENST00000488857 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
VAMP2-204ENST00000488857 Q6ZQY7 126 aa12.46□□□□□ -0.41
VAMP2-204ENST00000488857 A0A0B4J2C4 111 aa12.45□□□□□ -0.42
VAMP2-204ENST00000488857 H7C2G1 150 aa12.45□□□□□ -0.42
VAMP2-204ENST00000488857 Q5XG85 94 aa12.45□□□□□ -0.42
VAMP2-204ENST00000488857 PYY3Q5JQD4 70 aa12.44□□□□□ -0.42
VAMP2-204ENST00000488857 RAB37Q96AX2 223 aa12.43□□□□□ -0.42
VAMP2-204ENST00000488857 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms