RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 CHTOPQ9Y3Y2 248 aaKnown RBP4.79□□□□□ -1.64
COL17A1-207ENST00000488320 C11orf86A6NJI1 115 aa4.78□□□□□ -1.64
COL17A1-207ENST00000488320 LINC00587B1AMM8 73 aa4.78□□□□□ -1.64
COL17A1-207ENST00000488320 MT-ND4LP03901 98 aa4.78□□□□□ -1.64
COL17A1-207ENST00000488320 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
COL17A1-207ENST00000488320 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
COL17A1-207ENST00000488320 LINC01546A6NGU7 62 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 C5orf52A6NGY3 159 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 MT2AP02795 61 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 HINT1P49773 126 aaPredicted RBP4.77□□□□□ -1.65
COL17A1-207ENST00000488320 CD164Q04900 197 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 MAP1LC3CQ9BXW4 147 aa4.77□□□□□ -1.65
COL17A1-207ENST00000488320 TRAV23DV6A0A075B6W5 121 aa4.76□□□□□ -1.65
COL17A1-207ENST00000488320 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
COL17A1-207ENST00000488320 HERV-K104P63124 156 aa4.76□□□□□ -1.65
COL17A1-207ENST00000488320 PRO1933Q9H354 126 aa4.76□□□□□ -1.65
COL17A1-207ENST00000488320 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
COL17A1-207ENST00000488320 TRBV20-1A0A075B6N2 111 aa4.74□□□□□ -1.65
COL17A1-207ENST00000488320 ZNF73O43830 326 aaPredicted RBP4.74□□□□□ -1.65
COL17A1-207ENST00000488320 SPRR1BP22528 89 aa4.74□□□□□ -1.65
COL17A1-207ENST00000488320 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
COL17A1-207ENST00000488320 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
COL17A1-207ENST00000488320 SPANXB1Q9NS25 103 aaPredicted RBP4.74□□□□□ -1.65
COL17A1-207ENST00000488320 TMEM223A0PJW6 202 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 MT1FP04733 61 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 AKR1D1P51857 326 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 TAL2Q16559 108 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 Q1RN00 199 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 Q5XG85 94 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 MIEN1Q9BRT3 115 aa4.73□□□□□ -1.65
COL17A1-207ENST00000488320 MYMXA0A1B0GTQ4 84 aa4.72□□□□□ -1.65
COL17A1-207ENST00000488320 HBDP02042 147 aa4.72□□□□□ -1.65
COL17A1-207ENST00000488320 PCP2Q8IVA1 136 aa4.72□□□□□ -1.65
COL17A1-207ENST00000488320 TCL1BO95988 128 aa4.71□□□□□ -1.66
COL17A1-207ENST00000488320 C10orf91Q5T1B1 145 aa4.71□□□□□ -1.66
COL17A1-207ENST00000488320 A0A096LNJ9 63 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 LOC107984156A0A0G2JMH3 177 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 FABP9Q0Z7S8 132 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 PMCHL1Q16048 86 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 COMMD7Q86VX2 200 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 ARL17AQ8IVW1 177 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 DHRS4-AS1Q9P1J3 65 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 CBY1Q9Y3M2 126 aa4.7□□□□□ -1.66
COL17A1-207ENST00000488320 FAM236DA0A1B0GTK5 79 aa4.69□□□□□ -1.66
COL17A1-207ENST00000488320 LINC00614P0C842 121 aa4.69□□□□□ -1.66
COL17A1-207ENST00000488320 FAM236CP0DP71 79 aa4.69□□□□□ -1.66
COL17A1-207ENST00000488320 Q75L30 129 aa4.69□□□□□ -1.66
COL17A1-207ENST00000488320 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
COL17A1-207ENST00000488320 NDUFC2O95298 119 aa4.68□□□□□ -1.66
COL17A1-207ENST00000488320 OBSCN-AS1Q96MR7 158 aa4.68□□□□□ -1.66
COL17A1-207ENST00000488320 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
COL17A1-207ENST00000488320 NPC2P61916 151 aa4.67□□□□□ -1.66
COL17A1-207ENST00000488320 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
COL17A1-207ENST00000488320 OR13C6PQ8NH95 151 aa4.66□□□□□ -1.66
COL17A1-207ENST00000488320 hCG_2014768A0A024R1R8 64 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 LGALS3P17931 250 aaKnown RBP4.65□□□□□ -1.67
COL17A1-207ENST00000488320 S100PP25815 95 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 IFITM2Q01629 132 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 RHEBQ15382 184 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 URB1-AS1Q96HZ7 61 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 SEC11CQ9BY50 192 aa4.65□□□□□ -1.67
COL17A1-207ENST00000488320 TRAV12-1A0A0B4J245 112 aa4.64□□□□□ -1.67
COL17A1-207ENST00000488320 COX7BP24311 80 aa4.64□□□□□ -1.67
COL17A1-207ENST00000488320 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
COL17A1-207ENST00000488320 COX19Q49B96 90 aa4.64□□□□□ -1.67
COL17A1-207ENST00000488320 Q96NJ1 140 aa4.64□□□□□ -1.67
COL17A1-207ENST00000488320 RPS10P5Q9NQ39 176 aa4.64□□□□□ -1.67
COL17A1-207ENST00000488320 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
COL17A1-207ENST00000488320 LEPROTO15243 131 aa4.62□□□□□ -1.67
COL17A1-207ENST00000488320 C18orf32Q8TCD1 76 aa4.62□□□□□ -1.67
COL17A1-207ENST00000488320 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
COL17A1-207ENST00000488320 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
COL17A1-207ENST00000488320 TSPEAR-AS2P59090 65 aa4.61□□□□□ -1.67
COL17A1-207ENST00000488320 SOSTDC1Q6X4U4 206 aa4.61□□□□□ -1.67
COL17A1-207ENST00000488320 ELOF1P60002 83 aaKnown RBP4.6□□□□□ -1.67
COL17A1-207ENST00000488320 NEBP20929 6669 aa4.59□□□□□ -1.67
COL17A1-207ENST00000488320 H0Y8G0 127 aa4.59□□□□□ -1.67
COL17A1-207ENST00000488320 J3QQQ9 107 aa4.59□□□□□ -1.67
COL17A1-207ENST00000488320 RBM12B-AS1Q9P1G2 102 aa4.59□□□□□ -1.67
COL17A1-207ENST00000488320 TRAPPC1Q9Y5R8 145 aa4.59□□□□□ -1.67
COL17A1-207ENST00000488320 NMUP48645 174 aa4.58□□□□□ -1.68
COL17A1-207ENST00000488320 ADAMTSL4-AS1Q5T5F5 129 aa4.58□□□□□ -1.68
COL17A1-207ENST00000488320 HERVK_113P61574 105 aa4.57□□□□□ -1.68
COL17A1-207ENST00000488320 IGFL1Q6UW32 110 aa4.57□□□□□ -1.68
COL17A1-207ENST00000488320 F8WEM9 126 aa4.56□□□□□ -1.68
COL17A1-207ENST00000488320 SPANXDQ9BXN6 97 aa4.56□□□□□ -1.68
COL17A1-207ENST00000488320 SPANXCQ9NY87 97 aa4.56□□□□□ -1.68
COL17A1-207ENST00000488320 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
COL17A1-207ENST00000488320 A0A0J9YXY3 114 aa4.55□□□□□ -1.68
COL17A1-207ENST00000488320 A8MUU9 505 aa4.55□□□□□ -1.68
COL17A1-207ENST00000488320 LINC00308Q8TCZ7 52 aa4.54□□□□□ -1.68
COL17A1-207ENST00000488320 TRBV7-6A0A0J9YX20 115 aa4.53□□□□□ -1.68
COL17A1-207ENST00000488320 TRBV7-7A0A0K0K1E9 115 aa4.53□□□□□ -1.68
COL17A1-207ENST00000488320 A0A1B0GWB2 263 aa4.53□□□□□ -1.68
COL17A1-207ENST00000488320 LST1O00453 97 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms