RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 LITAFQ99732 161 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 CDKN2A-AS1Q9UH64 79 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
NECTIN3-209ENST00000488016 A0A1B0GV72 72 aa5.01□□□□□ -1.61
NECTIN3-209ENST00000488016 SPINK8P0C7L1 97 aa5.01□□□□□ -1.61
NECTIN3-209ENST00000488016 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
NECTIN3-209ENST00000488016 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
NECTIN3-209ENST00000488016 IGHV3-64A0A075B6Q5 118 aa5□□□□□ -1.61
NECTIN3-209ENST00000488016 CHTF8P0CG12 524 aa5□□□□□ -1.61
NECTIN3-209ENST00000488016 C14orf177Q52M58 125 aa5□□□□□ -1.61
NECTIN3-209ENST00000488016 C5orf38Q86SI9 138 aa5□□□□□ -1.61
NECTIN3-209ENST00000488016 LINC00308Q8TCZ7 52 aa5□□□□□ -1.61
NECTIN3-209ENST00000488016 SRRM2Q9UQ35 2752 aaKnown RBP5□□□□□ -1.61
NECTIN3-209ENST00000488016 H0YGX0 51 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 COX6A2Q02221 97 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 SS18Q15532 418 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 ADAMTSL4-AS1Q5T5F5 129 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 CD164L2Q6UWJ8 174 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 C2orf82Q6UX34 121 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 Q6ZSA8 131 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 SCXQ7RTU7 201 aa4.99□□□□□ -1.61
NECTIN3-209ENST00000488016 H7C2G1 150 aa4.98□□□□□ -1.61
NECTIN3-209ENST00000488016 LST1O00453 97 aa4.98□□□□□ -1.61
NECTIN3-209ENST00000488016 SNCGO76070 127 aa4.98□□□□□ -1.61
NECTIN3-209ENST00000488016 TRACP01848 142 aa4.98□□□□□ -1.61
NECTIN3-209ENST00000488016 Q6Q795 121 aa4.98□□□□□ -1.61
NECTIN3-209ENST00000488016 C9orf163Q8N9P6 203 aa4.98□□□□□ -1.61
NECTIN3-209ENST00000488016 GVQW2A0A096LPI5 108 aaPredicted RBP4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 COX7A2LO14548 114 aa4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 Q5VSD8 79 aa4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 CIRBP-AS1Q8TBR5 109 aa4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
NECTIN3-209ENST00000488016 A0A087WZ39 114 aa4.96□□□□□ -1.62
NECTIN3-209ENST00000488016 IGKV2-24A0A0C4DH68 120 aa4.96□□□□□ -1.62
NECTIN3-209ENST00000488016 SDIM1Q6ZPB5 146 aa4.96□□□□□ -1.62
NECTIN3-209ENST00000488016 IGHV3OR16-9A0A0B4J2B5 98 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 RPL28P46779 137 aaKnown RBP4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 CKS1BP61024 79 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 SPAG11BQ08648 103 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 GAGE2BQ13066 116 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 COX17Q14061 63 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 GAGE2EQ4V326 116 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 C6orf226Q5I0X4 101 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 CFAP161Q6P656 301 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 Q6ZRU5 148 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 GAGE2DQ9UEU5 116 aa4.95□□□□□ -1.62
NECTIN3-209ENST00000488016 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
NECTIN3-209ENST00000488016 A0A096LNI7 61 aa4.94□□□□□ -1.62
NECTIN3-209ENST00000488016 A0A1B0GX51 115 aa4.94□□□□□ -1.62
NECTIN3-209ENST00000488016 EPM2AB3EWF7 344 aa4.94□□□□□ -1.62
NECTIN3-209ENST00000488016 INAFM2P0DMQ5 153 aa4.94□□□□□ -1.62
NECTIN3-209ENST00000488016 CXCL5P42830 114 aa4.94□□□□□ -1.62
NECTIN3-209ENST00000488016 FLG2Q5D862 2391 aaPredicted RBP4.93□□□□□ -1.62
NECTIN3-209ENST00000488016 TNXBP22105 4242 aa4.93□□□□□ -1.62
NECTIN3-209ENST00000488016 H3BQ85 93 aa4.93□□□□□ -1.62
NECTIN3-209ENST00000488016 BAALC-AS2P0C853 105 aa4.93□□□□□ -1.62
NECTIN3-209ENST00000488016 LINC00158P58513 81 aa4.93□□□□□ -1.62
NECTIN3-209ENST00000488016 SYCNQ0VAF6 134 aa4.93□□□□□ -1.62
NECTIN3-209ENST00000488016 A0A087WYN8 130 aa4.92□□□□□ -1.62
NECTIN3-209ENST00000488016 Q8IZM0 81 aa4.92□□□□□ -1.62
NECTIN3-209ENST00000488016 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
NECTIN3-209ENST00000488016 SPACA4Q8TDM5 124 aa4.92□□□□□ -1.62
NECTIN3-209ENST00000488016 CAMK2N2Q96S95 79 aa4.92□□□□□ -1.62
NECTIN3-209ENST00000488016 SND1-IT1Q9HBX3 110 aa4.92□□□□□ -1.62
NECTIN3-209ENST00000488016 NDUFC2O95298 119 aa4.91□□□□□ -1.62
NECTIN3-209ENST00000488016 DNAL4O96015 105 aa4.91□□□□□ -1.62
NECTIN3-209ENST00000488016 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
NECTIN3-209ENST00000488016 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
NECTIN3-209ENST00000488016 C9orf116Q5BN46 136 aaPredicted RBP4.91□□□□□ -1.62
NECTIN3-209ENST00000488016 UNQ6190/PRO20217Q6UXQ8 127 aa4.91□□□□□ -1.62
NECTIN3-209ENST00000488016 TEX49A0A1B0GTD5 131 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 RPL18AQ02543 176 aaKnown RBP4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 DAND5Q8N907 189 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 DPH3Q96FX2 82 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 C2orf48Q96LS8 159 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 TOMM7Q9P0U1 55 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.63
NECTIN3-209ENST00000488016 MT-ATP8P03928 68 aa4.89□□□□□ -1.63
NECTIN3-209ENST00000488016 NPC2P61916 151 aa4.89□□□□□ -1.63
NECTIN3-209ENST00000488016 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
NECTIN3-209ENST00000488016 CLEC2BQ92478 149 aa4.89□□□□□ -1.63
NECTIN3-209ENST00000488016 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
NECTIN3-209ENST00000488016 FAM168BA1KXE4 195 aa4.88□□□□□ -1.63
NECTIN3-209ENST00000488016 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
NECTIN3-209ENST00000488016 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
NECTIN3-209ENST00000488016 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
NECTIN3-209ENST00000488016 A0A0U1RRA0 63 aa4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 F8WDY8 70 aa4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 JMJD7-PLA2G4BH0Y9G9 81 aa4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 RPL37AP61513 92 aaKnown RBP4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 Q6ZRP5 223 aa4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 PLAC8Q9NZF1 115 aa4.87□□□□□ -1.63
NECTIN3-209ENST00000488016 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms