RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 IGLV6-57P01721 117 aa5.59□□□□□ -1.51
LCN2-205ENST00000487719 SPRR1AP35321 89 aa5.59□□□□□ -1.51
LCN2-205ENST00000487719 LITAFQ99732 161 aa5.59□□□□□ -1.51
LCN2-205ENST00000487719 C5orf52A6NGY3 159 aa5.58□□□□□ -1.52
LCN2-205ENST00000487719 ZNF73O43830 326 aaPredicted RBP5.58□□□□□ -1.52
LCN2-205ENST00000487719 SOSTDC1Q6X4U4 206 aa5.58□□□□□ -1.52
LCN2-205ENST00000487719 TNXBP22105 4242 aa5.58□□□□□ -1.52
LCN2-205ENST00000487719 Q6ZRX8 168 aa5.57□□□□□ -1.52
LCN2-205ENST00000487719 PCP2Q8IVA1 136 aa5.57□□□□□ -1.52
LCN2-205ENST00000487719 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
LCN2-205ENST00000487719 B5MCH6 92 aa5.56□□□□□ -1.52
LCN2-205ENST00000487719 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
LCN2-205ENST00000487719 A0A087X002 238 aa5.55□□□□□ -1.52
LCN2-205ENST00000487719 A6NDN8 102 aa5.55□□□□□ -1.52
LCN2-205ENST00000487719 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
LCN2-205ENST00000487719 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
LCN2-205ENST00000487719 TRAV13-2A0A0B4J235 113 aa5.54□□□□□ -1.52
LCN2-205ENST00000487719 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
LCN2-205ENST00000487719 C4orf48Q5BLP8 95 aa5.54□□□□□ -1.52
LCN2-205ENST00000487719 LINC00304Q8N9R0 145 aa5.54□□□□□ -1.52
LCN2-205ENST00000487719 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
LCN2-205ENST00000487719 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
LCN2-205ENST00000487719 GAGE2AQ6NT46 116 aa5.53□□□□□ -1.52
LCN2-205ENST00000487719 SLC25A34Q6PIV7 304 aa5.53□□□□□ -1.52
LCN2-205ENST00000487719 MUSTN1Q8IVN3 82 aa5.53□□□□□ -1.52
LCN2-205ENST00000487719 VAMP8Q9BV40 100 aa5.53□□□□□ -1.52
LCN2-205ENST00000487719 HIST1H4GQ99525 98 aa5.52□□□□□ -1.53
LCN2-205ENST00000487719 TSPAN13O95857 204 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 COX8AP10176 69 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 COX7BP24311 80 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 CTAG1AP78358 180 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 VAMP3Q15836 100 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 C6orf99Q4VX62 202 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 SPAG11AQ6PDA7 123 aa5.51□□□□□ -1.53
LCN2-205ENST00000487719 NHP2Q9NX24 153 aaKnown RBP5.51□□□□□ -1.53
LCN2-205ENST00000487719 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 A0A1B0GWB2 263 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 A4D1N5 150 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 PRR4Q16378 134 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 KRTAP13-2Q52LG2 175 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 SPATA45Q537H7 98 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 LINC00483Q53H64 154 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 Q9BRP9 147 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 PAM16Q9Y3D7 125 aa5.5□□□□□ -1.53
LCN2-205ENST00000487719 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
LCN2-205ENST00000487719 DLEU1O43261 78 aa5.49□□□□□ -1.53
LCN2-205ENST00000487719 SLC25A20O43772 301 aa5.49□□□□□ -1.53
LCN2-205ENST00000487719 ELOF1P60002 83 aaKnown RBP5.49□□□□□ -1.53
LCN2-205ENST00000487719 C9orf153Q5TBE3 101 aa5.49□□□□□ -1.53
LCN2-205ENST00000487719 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
LCN2-205ENST00000487719 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
LCN2-205ENST00000487719 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
LCN2-205ENST00000487719 C3orf22Q8N5N4 141 aa5.48□□□□□ -1.53
LCN2-205ENST00000487719 MOBPQ13875 183 aa5.47□□□□□ -1.53
LCN2-205ENST00000487719 TAL2Q16559 108 aa5.47□□□□□ -1.53
LCN2-205ENST00000487719 LAMTOR3Q9UHA4 124 aa5.47□□□□□ -1.53
LCN2-205ENST00000487719 SNCGO76070 127 aa5.46□□□□□ -1.54
LCN2-205ENST00000487719 SSBP3-AS1Q7Z2R9 100 aa5.46□□□□□ -1.54
LCN2-205ENST00000487719 Q8NBF4 154 aa5.46□□□□□ -1.54
LCN2-205ENST00000487719 C14orf144Q96I85 54 aa5.46□□□□□ -1.54
LCN2-205ENST00000487719 HIGD1BQ9P298 99 aa5.46□□□□□ -1.54
LCN2-205ENST00000487719 TMEM238LA0A1B0GVL6 79 aa5.45□□□□□ -1.54
LCN2-205ENST00000487719 A6NJY4 79 aa5.45□□□□□ -1.54
LCN2-205ENST00000487719 SPINK1P00995 79 aa5.45□□□□□ -1.54
LCN2-205ENST00000487719 SMIM11BQ8TCY0 68 aa5.45□□□□□ -1.54
LCN2-205ENST00000487719 RAB37Q96AX2 223 aa5.45□□□□□ -1.54
LCN2-205ENST00000487719 TEX49A0A1B0GTD5 131 aa5.44□□□□□ -1.54
LCN2-205ENST00000487719 BVES-AS1Q5T3Y7 98 aa5.44□□□□□ -1.54
LCN2-205ENST00000487719 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
LCN2-205ENST00000487719 DEFB105AQ8NG35 78 aa5.43□□□□□ -1.54
LCN2-205ENST00000487719 C12orf57Q99622 126 aa5.43□□□□□ -1.54
LCN2-205ENST00000487719 F8WEM9 126 aa5.42□□□□□ -1.54
LCN2-205ENST00000487719 SPRR1BP22528 89 aa5.42□□□□□ -1.54
LCN2-205ENST00000487719 Q1RN00 199 aa5.42□□□□□ -1.54
LCN2-205ENST00000487719 RPS29P62273 56 aaKnown RBP5.41□□□□□ -1.54
LCN2-205ENST00000487719 A0A0B4J2C4 111 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 hADV29S1A0JD25 119 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 H7C2G1 150 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 LRP2P98164 4655 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 PYY3Q5JQD4 70 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
LCN2-205ENST00000487719 CEND1Q8N111 149 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
LCN2-205ENST00000487719 PRO1933Q9H354 126 aa5.39□□□□□ -1.55
LCN2-205ENST00000487719 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 GHRHP01286 108 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 HSD52Q0P140 79 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 LINC00575Q6W349 94 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 C2orf91Q6ZV80 131 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 UQCR10Q9UDW1 63 aa5.38□□□□□ -1.55
LCN2-205ENST00000487719 H0YGX0 51 aa5.37□□□□□ -1.55
LCN2-205ENST00000487719 CFC1BP0CG36 223 aa5.37□□□□□ -1.55
LCN2-205ENST00000487719 CFC1P0CG37 223 aa5.37□□□□□ -1.55
LCN2-205ENST00000487719 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.37□□□□□ -1.55
LCN2-205ENST00000487719 CDIP1Q9H305 208 aa5.37□□□□□ -1.55
LCN2-205ENST00000487719 PRO1854Q9UHT4 67 aa5.37□□□□□ -1.55
LCN2-205ENST00000487719 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
LCN2-205ENST00000487719 Q6ZQY7 126 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms