RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 IGLV9-49A0A0B4J1Y8 123 aa13.97□□□□□ -0.17
SEMA3C-209ENST00000487621 NPC2P61916 151 aa13.97□□□□□ -0.17
SEMA3C-209ENST00000487621 SYS1-DBNDD2H3BUS1 97 aa13.95□□□□□ -0.18
SEMA3C-209ENST00000487621 RPS29P62273 56 aaKnown RBP13.95□□□□□ -0.18
SEMA3C-209ENST00000487621 LITAFQ99732 161 aa13.95□□□□□ -0.18
SEMA3C-209ENST00000487621 ZNF73O43830 326 aaPredicted RBP13.94□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BKO60814 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BJP06899 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BOP23527 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BBP33778 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BDP58876 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BCP62807 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST2H2BEQ16778 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 Q8N377 158 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BHQ93079 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BNQ99877 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 HIST1H2BMQ99879 126 aa13.93□□□□□ -0.18
SEMA3C-209ENST00000487621 JOSD1Q15040 202 aaPredicted RBP13.92□□□□□ -0.18
SEMA3C-209ENST00000487621 LINC01545Q5VT33 79 aa13.9□□□□□ -0.18
SEMA3C-209ENST00000487621 LINC00308Q8TCZ7 52 aa13.89□□□□□ -0.19
SEMA3C-209ENST00000487621 ST20-AS1Q8NBB2 130 aa13.88□□□□□ -0.19
SEMA3C-209ENST00000487621 TIMM17BO60830 172 aa13.87□□□□□ -0.19
SEMA3C-209ENST00000487621 SPANXCQ9NY87 97 aa13.87□□□□□ -0.19
SEMA3C-209ENST00000487621 ASB16-AS1Q495Z4 193 aa13.86□□□□□ -0.19
SEMA3C-209ENST00000487621 C5orf52A6NGY3 159 aa13.85□□□□□ -0.19
SEMA3C-209ENST00000487621 PET117Q6UWS5 81 aa13.84□□□□□ -0.19
SEMA3C-209ENST00000487621 SLC25A20O43772 301 aa13.83□□□□□ -0.2
SEMA3C-209ENST00000487621 KRTAP9-2Q9BYQ4 174 aa13.83□□□□□ -0.2
SEMA3C-209ENST00000487621 CBY1Q9Y3M2 126 aa13.83□□□□□ -0.2
SEMA3C-209ENST00000487621 TTTY13Q9BZ97 58 aa13.82□□□□□ -0.2
SEMA3C-209ENST00000487621 C9orf153Q5TBE3 101 aa13.81□□□□□ -0.2
SEMA3C-209ENST00000487621 ZNF815PA8K554 130 aa13.8□□□□□ -0.2
SEMA3C-209ENST00000487621 SPRR1BP22528 89 aa13.8□□□□□ -0.2
SEMA3C-209ENST00000487621 HINT1P49773 126 aaPredicted RBP13.8□□□□□ -0.2
SEMA3C-209ENST00000487621 C3orf79P0CE67 100 aa13.79□□□□□ -0.2
SEMA3C-209ENST00000487621 KRTAP4-1Q9BYQ7 146 aa13.79□□□□□ -0.2
SEMA3C-209ENST00000487621 OR13C6PQ8NH95 151 aa13.78□□□□□ -0.2
SEMA3C-209ENST00000487621 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
SEMA3C-209ENST00000487621 COA6Q5JTJ3 125 aaKnown RBP13.75□□□□□ -0.21
SEMA3C-209ENST00000487621 DHRS4-AS1Q9P1J3 65 aa13.75□□□□□ -0.21
SEMA3C-209ENST00000487621 ELOF1P60002 83 aaKnown RBP13.73□□□□□ -0.21
SEMA3C-209ENST00000487621 SEC61BP60468 96 aaKnown RBP13.73□□□□□ -0.21
SEMA3C-209ENST00000487621 XP32Q5T750 250 aa13.72□□□□□ -0.21
SEMA3C-209ENST00000487621 LINC00518Q8N0U6 118 aa13.72□□□□□ -0.21
SEMA3C-209ENST00000487621 C6orf99Q4VX62 202 aa13.7□□□□□ -0.22
SEMA3C-209ENST00000487621 COX7BP24311 80 aa13.69□□□□□ -0.22
SEMA3C-209ENST00000487621 KRTDAPP60985 99 aa13.68□□□□□ -0.22
SEMA3C-209ENST00000487621 SLC25A34Q6PIV7 304 aa13.68□□□□□ -0.22
SEMA3C-209ENST00000487621 ANKRD39Q53RE8 183 aa13.67□□□□□ -0.22
SEMA3C-209ENST00000487621 LAMTOR3Q9UHA4 124 aa13.65□□□□□ -0.22
SEMA3C-209ENST00000487621 TRBV7-6A0A0J9YX20 115 aa13.63□□□□□ -0.23
SEMA3C-209ENST00000487621 SCGB1D4Q6XE38 83 aa13.63□□□□□ -0.23
SEMA3C-209ENST00000487621 HRCT1Q6UXD1 115 aa13.62□□□□□ -0.23
SEMA3C-209ENST00000487621 LIMD2Q9BT23 127 aa13.62□□□□□ -0.23
SEMA3C-209ENST00000487621 IFITM1P13164 125 aa13.6□□□□□ -0.23
SEMA3C-209ENST00000487621 C20orf202A1L168 122 aa13.59□□□□□ -0.23
SEMA3C-209ENST00000487621 TAL2Q16559 108 aa13.59□□□□□ -0.23
SEMA3C-209ENST00000487621 Q1RN00 199 aa13.59□□□□□ -0.23
SEMA3C-209ENST00000487621 SMIM29Q86T20 159 aa13.59□□□□□ -0.23
SEMA3C-209ENST00000487621 ATOH7Q8N100 152 aa13.59□□□□□ -0.23
SEMA3C-209ENST00000487621 TEX49A0A1B0GTD5 131 aa13.58□□□□□ -0.24
SEMA3C-209ENST00000487621 LINC01547P58512 204 aaPredicted RBP13.58□□□□□ -0.24
SEMA3C-209ENST00000487621 Q6ZVH6 145 aa13.58□□□□□ -0.24
SEMA3C-209ENST00000487621 DEFB105AQ8NG35 78 aa13.58□□□□□ -0.24
SEMA3C-209ENST00000487621 CD164Q04900 197 aa13.57□□□□□ -0.24
SEMA3C-209ENST00000487621 PCP2Q8IVA1 136 aa13.57□□□□□ -0.24
SEMA3C-209ENST00000487621 COPS9Q8WXC6 57 aa13.57□□□□□ -0.24
SEMA3C-209ENST00000487621 A0A1B0GWB2 263 aa13.56□□□□□ -0.24
SEMA3C-209ENST00000487621 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
SEMA3C-209ENST00000487621 IGLV5-48A0A075B6I7 105 aa13.55□□□□□ -0.24
SEMA3C-209ENST00000487621 PRO1933Q9H354 126 aa13.55□□□□□ -0.24
SEMA3C-209ENST00000487621 A6NDN8 102 aa13.53□□□□□ -0.24
SEMA3C-209ENST00000487621 Q5XG85 94 aa13.5□□□□□ -0.25
SEMA3C-209ENST00000487621 AKR1D1P51857 326 aa13.49□□□□□ -0.25
SEMA3C-209ENST00000487621 LCE2CQ5TA81 110 aa13.48□□□□□ -0.25
SEMA3C-209ENST00000487621 A4D1N5 150 aa13.47□□□□□ -0.25
SEMA3C-209ENST00000487621 C9orf92A6NGG3 77 aa13.47□□□□□ -0.25
SEMA3C-209ENST00000487621 H7C2G1 150 aa13.47□□□□□ -0.25
SEMA3C-209ENST00000487621 SMIM11BQ8TCY0 68 aa13.47□□□□□ -0.25
SEMA3C-209ENST00000487621 TRAV13-2A0A0B4J235 113 aa13.46□□□□□ -0.25
SEMA3C-209ENST00000487621 A0A0G2JQZ4 141 aa13.46□□□□□ -0.25
SEMA3C-209ENST00000487621 KRTAP19-2Q3LHN2 52 aa13.46□□□□□ -0.25
SEMA3C-209ENST00000487621 SNRPEP62304 92 aaKnown RBP13.45□□□□□ -0.26
SEMA3C-209ENST00000487621 PCOTHQ58A44 107 aa13.44□□□□□ -0.26
SEMA3C-209ENST00000487621 C1orf195Q5TG92 126 aa13.42□□□□□ -0.26
SEMA3C-209ENST00000487621 KRTAP9-6A0A140TA67 174 aa13.4□□□□□ -0.26
SEMA3C-209ENST00000487621 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
SEMA3C-209ENST00000487621 HIST3H2BBQ8N257 126 aa13.39□□□□□ -0.27
SEMA3C-209ENST00000487621 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
SEMA3C-209ENST00000487621 IGLV8-61A0A075B6I0 122 aa13.37□□□□□ -0.27
SEMA3C-209ENST00000487621 LINC00575Q6W349 94 aa13.34□□□□□ -0.27
SEMA3C-209ENST00000487621 LCE2DQ5TA82 110 aaPredicted RBP13.33□□□□□ -0.28
SEMA3C-209ENST00000487621 MT1HP80294 61 aa13.29□□□□□ -0.28
SEMA3C-209ENST00000487621 VAMP3Q15836 100 aa13.29□□□□□ -0.28
SEMA3C-209ENST00000487621 S100A2P29034 98 aa13.28□□□□□ -0.28
SEMA3C-209ENST00000487621 HSBP1L1C9JCN9 74 aa13.27□□□□□ -0.29
SEMA3C-209ENST00000487621 Q6ZQY7 126 aa13.27□□□□□ -0.29
SEMA3C-209ENST00000487621 hADV29S1A0JD25 119 aa13.26□□□□□ -0.29
SEMA3C-209ENST00000487621 RPL37P61927 97 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms