RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SSBP3-AS1Q7Z2R9 100 aa13.36□□□□□ -0.27
PLOD3-215ENST00000487563 EIF4EBP3O60516 100 aaPredicted RBP13.35□□□□□ -0.27
PLOD3-215ENST00000487563 CBY1Q9Y3M2 126 aa13.35□□□□□ -0.27
PLOD3-215ENST00000487563 HINT1P49773 126 aaPredicted RBP13.33□□□□□ -0.28
PLOD3-215ENST00000487563 C9orf153Q5TBE3 101 aa13.33□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BKO60814 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BJP06899 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BOP23527 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BBP33778 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BDP58876 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BCP62807 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST2H2BEQ16778 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BHQ93079 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BNQ99877 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 HIST1H2BMQ99879 126 aa13.32□□□□□ -0.28
PLOD3-215ENST00000487563 RPS29P62273 56 aaKnown RBP13.31□□□□□ -0.28
PLOD3-215ENST00000487563 OR13C6PQ8NH95 151 aa13.31□□□□□ -0.28
PLOD3-215ENST00000487563 SPANXCQ9NY87 97 aa13.3□□□□□ -0.28
PLOD3-215ENST00000487563 LINC00308Q8TCZ7 52 aa13.29□□□□□ -0.28
PLOD3-215ENST00000487563 FAT4Q6V0I7 4981 aa13.29□□□□□ -0.28
PLOD3-215ENST00000487563 LINC01545Q5VT33 79 aa13.28□□□□□ -0.28
PLOD3-215ENST00000487563 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
PLOD3-215ENST00000487563 ZNF815PA8K554 130 aa13.27□□□□□ -0.29
PLOD3-215ENST00000487563 SLC25A20O43772 301 aa13.27□□□□□ -0.29
PLOD3-215ENST00000487563 TIMM17BO60830 172 aa13.27□□□□□ -0.29
PLOD3-215ENST00000487563 Q8N377 158 aa13.27□□□□□ -0.29
PLOD3-215ENST00000487563 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.29
PLOD3-215ENST00000487563 LITAFQ99732 161 aa13.27□□□□□ -0.29
PLOD3-215ENST00000487563 C5orf52A6NGY3 159 aa13.24□□□□□ -0.29
PLOD3-215ENST00000487563 LCE2AQ5TA79 106 aaPredicted RBP13.23□□□□□ -0.29
PLOD3-215ENST00000487563 SPANXDQ9BXN6 97 aa13.22□□□□□ -0.29
PLOD3-215ENST00000487563 TTTY13Q9BZ97 58 aa13.21□□□□□ -0.29
PLOD3-215ENST00000487563 DHRS4-AS1Q9P1J3 65 aa13.21□□□□□ -0.29
PLOD3-215ENST00000487563 C3orf79P0CE67 100 aa13.2□□□□□ -0.3
PLOD3-215ENST00000487563 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
PLOD3-215ENST00000487563 KRTDAPP60985 99 aa13.19□□□□□ -0.3
PLOD3-215ENST00000487563 SLC25A34Q6PIV7 304 aa13.19□□□□□ -0.3
PLOD3-215ENST00000487563 SEC61BP60468 96 aaKnown RBP13.18□□□□□ -0.3
PLOD3-215ENST00000487563 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
PLOD3-215ENST00000487563 SCGB1D4Q6XE38 83 aa13.16□□□□□ -0.3
PLOD3-215ENST00000487563 COX7BP24311 80 aa13.15□□□□□ -0.3
PLOD3-215ENST00000487563 C20orf202A1L168 122 aa13.14□□□□□ -0.31
PLOD3-215ENST00000487563 SPRR1BP22528 89 aa13.14□□□□□ -0.31
PLOD3-215ENST00000487563 C6orf99Q4VX62 202 aa13.14□□□□□ -0.31
PLOD3-215ENST00000487563 LAMTOR3Q9UHA4 124 aa13.14□□□□□ -0.31
PLOD3-215ENST00000487563 ELOF1P60002 83 aaKnown RBP13.13□□□□□ -0.31
PLOD3-215ENST00000487563 LIMD2Q9BT23 127 aa13.12□□□□□ -0.31
PLOD3-215ENST00000487563 COA6Q5JTJ3 125 aaKnown RBP13.11□□□□□ -0.31
PLOD3-215ENST00000487563 HRCT1Q6UXD1 115 aa13.11□□□□□ -0.31
PLOD3-215ENST00000487563 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
PLOD3-215ENST00000487563 TAL2Q16559 108 aa13.1□□□□□ -0.31
PLOD3-215ENST00000487563 KRTAP9-2Q9BYQ4 174 aa13.1□□□□□ -0.31
PLOD3-215ENST00000487563 DEFB105AQ8NG35 78 aa13.08□□□□□ -0.32
PLOD3-215ENST00000487563 ANKRD39Q53RE8 183 aa13.07□□□□□ -0.32
PLOD3-215ENST00000487563 Q1RN00 199 aa13.06□□□□□ -0.32
PLOD3-215ENST00000487563 ATOH7Q8N100 152 aa13.06□□□□□ -0.32
PLOD3-215ENST00000487563 A6NDN8 102 aa13.05□□□□□ -0.32
PLOD3-215ENST00000487563 IFITM1P13164 125 aa13.05□□□□□ -0.32
PLOD3-215ENST00000487563 XP32Q5T750 250 aa13.05□□□□□ -0.32
PLOD3-215ENST00000487563 TRBV7-6A0A0J9YX20 115 aa13.03□□□□□ -0.32
PLOD3-215ENST00000487563 TEX49A0A1B0GTD5 131 aa13.02□□□□□ -0.33
PLOD3-215ENST00000487563 A0A1B0GWB2 263 aa13.02□□□□□ -0.33
PLOD3-215ENST00000487563 LINC01547P58512 204 aaPredicted RBP13.02□□□□□ -0.33
PLOD3-215ENST00000487563 Q6ZVH6 145 aa13.02□□□□□ -0.33
PLOD3-215ENST00000487563 KRTAP4-1Q9BYQ7 146 aa13.02□□□□□ -0.33
PLOD3-215ENST00000487563 AKR1D1P51857 326 aa13.01□□□□□ -0.33
PLOD3-215ENST00000487563 PRO1933Q9H354 126 aa13.01□□□□□ -0.33
PLOD3-215ENST00000487563 PCP2Q8IVA1 136 aa12.99□□□□□ -0.33
PLOD3-215ENST00000487563 MUSTN1Q8IVN3 82 aa12.99□□□□□ -0.33
PLOD3-215ENST00000487563 CD164Q04900 197 aa12.97□□□□□ -0.33
PLOD3-215ENST00000487563 H7C2G1 150 aa12.96□□□□□ -0.33
PLOD3-215ENST00000487563 TRAV13-2A0A0B4J235 113 aa12.94□□□□□ -0.34
PLOD3-215ENST00000487563 A4D1N5 150 aa12.94□□□□□ -0.34
PLOD3-215ENST00000487563 C9orf92A6NGG3 77 aa12.94□□□□□ -0.34
PLOD3-215ENST00000487563 NHP2Q9NX24 153 aaKnown RBP12.93□□□□□ -0.34
PLOD3-215ENST00000487563 IGLV5-48A0A075B6I7 105 aa12.92□□□□□ -0.34
PLOD3-215ENST00000487563 SNRPEP62304 92 aaKnown RBP12.92□□□□□ -0.34
PLOD3-215ENST00000487563 SMIM29Q86T20 159 aa12.91□□□□□ -0.34
PLOD3-215ENST00000487563 SMIM11BQ8TCY0 68 aa12.9□□□□□ -0.34
PLOD3-215ENST00000487563 S100A2P29034 98 aa12.86□□□□□ -0.35
PLOD3-215ENST00000487563 PCOTHQ58A44 107 aa12.86□□□□□ -0.35
PLOD3-215ENST00000487563 A0A0G2JQZ4 141 aa12.85□□□□□ -0.35
PLOD3-215ENST00000487563 HSBP1L1C9JCN9 74 aa12.85□□□□□ -0.35
PLOD3-215ENST00000487563 VAMP3Q15836 100 aa12.84□□□□□ -0.35
PLOD3-215ENST00000487563 Q5XG85 94 aa12.84□□□□□ -0.35
PLOD3-215ENST00000487563 IGLV8-61A0A075B6I0 122 aa12.82□□□□□ -0.36
PLOD3-215ENST00000487563 F8WEM9 126 aa12.82□□□□□ -0.36
PLOD3-215ENST00000487563 C1orf195Q5TG92 126 aa12.81□□□□□ -0.36
PLOD3-215ENST00000487563 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
PLOD3-215ENST00000487563 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
PLOD3-215ENST00000487563 TCL1BO95988 128 aa12.77□□□□□ -0.37
PLOD3-215ENST00000487563 LINC00575Q6W349 94 aa12.76□□□□□ -0.37
PLOD3-215ENST00000487563 hADV29S1A0JD25 119 aa12.73□□□□□ -0.37
PLOD3-215ENST00000487563 S100A6P06703 90 aa12.73□□□□□ -0.37
PLOD3-215ENST00000487563 Q6ZQY7 126 aa12.73□□□□□ -0.37
PLOD3-215ENST00000487563 KRTAP9-6A0A140TA67 174 aa12.72□□□□□ -0.37
PLOD3-215ENST00000487563 LCE2CQ5TA81 110 aa12.7□□□□□ -0.38
PLOD3-215ENST00000487563 C12orf57Q99622 126 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms