RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 TM2D3Q9BRN9 247 aa4.67□□□□□ -1.66
SMARCAL1-212ENST00000486983 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
SMARCAL1-212ENST00000486983 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
SMARCAL1-212ENST00000486983 TRAV23DV6A0A075B6W5 121 aa4.66□□□□□ -1.66
SMARCAL1-212ENST00000486983 hADV29S1A0JD25 119 aa4.66□□□□□ -1.66
SMARCAL1-212ENST00000486983 NDUFC2-KCTD14E9PQ53 114 aa4.66□□□□□ -1.66
SMARCAL1-212ENST00000486983 VPREB1P12018 145 aa4.66□□□□□ -1.66
SMARCAL1-212ENST00000486983 RPL18AQ02543 176 aaKnown RBP4.66□□□□□ -1.66
SMARCAL1-212ENST00000486983 M0R378 163 aa4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 CCKP06307 115 aa4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 C9orf129Q5T035 196 aaKnown RBP4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 Q6ZRU5 148 aa4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 DIRC1Q969H9 104 aa4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 LINC00526Q96FQ7 95 aa4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 C14orf132Q9NPU4 83 aa4.65□□□□□ -1.67
SMARCAL1-212ENST00000486983 TRBV10-3A0A0K0K1G6 114 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 TLX1NBP0CAT3 122 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 NHLRC4P0CG21 123 aaPredicted RBP4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 ELOF1P60002 83 aaKnown RBP4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 HIGD2BQ4VC39 106 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 Q6JHZ5 121 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 UPK3BQ9BT76 320 aa4.64□□□□□ -1.67
SMARCAL1-212ENST00000486983 IGKV2D-24A0A075B6R9 120 aa4.63□□□□□ -1.67
SMARCAL1-212ENST00000486983 LOC110117498A0A087WWA1 95 aa4.63□□□□□ -1.67
SMARCAL1-212ENST00000486983 PDE6GP18545 87 aa4.63□□□□□ -1.67
SMARCAL1-212ENST00000486983 SYCNQ0VAF6 134 aa4.63□□□□□ -1.67
SMARCAL1-212ENST00000486983 RMI2Q96E14 147 aa4.63□□□□□ -1.67
SMARCAL1-212ENST00000486983 K7EIL1 84 aa4.62□□□□□ -1.67
SMARCAL1-212ENST00000486983 COX7BP24311 80 aa4.62□□□□□ -1.67
SMARCAL1-212ENST00000486983 XAGE1AQ9HD64 81 aa4.62□□□□□ -1.67
SMARCAL1-212ENST00000486983 LINC00846Q9NV44 126 aa4.62□□□□□ -1.67
SMARCAL1-212ENST00000486983 LINC00588Q9Y4M8 146 aa4.62□□□□□ -1.67
SMARCAL1-212ENST00000486983 TENM3Q9P273 2699 aa4.62□□□□□ -1.67
SMARCAL1-212ENST00000486983 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
SMARCAL1-212ENST00000486983 FAM236AA0A1B0GUQ0 79 aa4.61□□□□□ -1.67
SMARCAL1-212ENST00000486983 FAM236BA0A1B0GV22 79 aa4.61□□□□□ -1.67
SMARCAL1-212ENST00000486983 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
SMARCAL1-212ENST00000486983 Q6ZRP5 223 aa4.61□□□□□ -1.67
SMARCAL1-212ENST00000486983 MRAPQ8TCY5 172 aa4.61□□□□□ -1.67
SMARCAL1-212ENST00000486983 RBM3P98179 157 aaKnown RBP4.6□□□□□ -1.67
SMARCAL1-212ENST00000486983 Q6ZQT0 140 aa4.6□□□□□ -1.67
SMARCAL1-212ENST00000486983 Q6ZQY7 126 aa4.6□□□□□ -1.67
SMARCAL1-212ENST00000486983 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
SMARCAL1-212ENST00000486983 PRB2P02812 416 aaPredicted RBP4.59□□□□□ -1.67
SMARCAL1-212ENST00000486983 KCNQ1DNQ9H478 68 aa4.59□□□□□ -1.67
SMARCAL1-212ENST00000486983 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 ATOX1O00244 68 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 NKAPP1Q8N9T2 125 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 DSCR8Q96T75 97 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 LAMTOR3Q9UHA4 124 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 MEGF8Q7Z7M0 2845 aa4.58□□□□□ -1.68
SMARCAL1-212ENST00000486983 TRBV7-4A0A0J9YYF1 115 aa4.57□□□□□ -1.68
SMARCAL1-212ENST00000486983 PRYO14603 147 aa4.57□□□□□ -1.68
SMARCAL1-212ENST00000486983 HUWE1Q7Z6Z7 4374 aaKnown RBP4.57□□□□□ -1.68
SMARCAL1-212ENST00000486983 C7orf33Q8WU49 177 aa4.56□□□□□ -1.68
SMARCAL1-212ENST00000486983 DYNC2H1Q8NCM8 4307 aaKnown RBP4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 CCDC179H3BU77 68 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 UQCRQO14949 82 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 SPRR1AP35321 89 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 SERTAD4-AS1Q5TG53 156 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 DHRS4-AS1Q9P1J3 65 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 NOTCH1P46531 2555 aa4.55□□□□□ -1.68
SMARCAL1-212ENST00000486983 IGLV1-50A0A075B6I6 118 aa4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 IGKV3D-7A0A0C4DH55 119 aa4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 A0A1B0GW54 56 aa4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 KRTAP4-16G5E9R7 235 aaPredicted RBP4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 CXCL6P80162 114 aa4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 C3orf22Q8N5N4 141 aa4.54□□□□□ -1.68
SMARCAL1-212ENST00000486983 BCE1O60756 84 aa4.53□□□□□ -1.68
SMARCAL1-212ENST00000486983 COX7CP15954 63 aa4.53□□□□□ -1.68
SMARCAL1-212ENST00000486983 Q6ZRX8 168 aa4.53□□□□□ -1.68
SMARCAL1-212ENST00000486983 B9D2Q9BPU9 175 aa4.53□□□□□ -1.68
SMARCAL1-212ENST00000486983 TGP01266 2768 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 C14orf177Q52M58 125 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 CASC10Q5T4H9 136 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 Q6ZVQ6 151 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 MRPL55Q7Z7F7 128 aaKnown RBP4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 FAM30AQ9NZY2 134 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 APLNQ9ULZ1 77 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 PKIGQ9Y2B9 76 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 MGAM2Q2M2H8 2515 aa4.52□□□□□ -1.69
SMARCAL1-212ENST00000486983 ETDCA0A1B0GVM5 59 aa4.51□□□□□ -1.69
SMARCAL1-212ENST00000486983 CRYGAP11844 174 aa4.51□□□□□ -1.69
SMARCAL1-212ENST00000486983 LINC01547P58512 204 aaPredicted RBP4.51□□□□□ -1.69
SMARCAL1-212ENST00000486983 SERP2Q8N6R1 65 aa4.51□□□□□ -1.69
SMARCAL1-212ENST00000486983 A0A087WVE0 104 aa4.5□□□□□ -1.69
SMARCAL1-212ENST00000486983 C16orf90A8MZG2 172 aa4.5□□□□□ -1.69
SMARCAL1-212ENST00000486983 C9orf153Q5TBE3 101 aa4.5□□□□□ -1.69
SMARCAL1-212ENST00000486983 KRTAP7-1Q8IUC3 87 aa4.5□□□□□ -1.69
SMARCAL1-212ENST00000486983 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
SMARCAL1-212ENST00000486983 FAM168BA1KXE4 195 aa4.49□□□□□ -1.69
SMARCAL1-212ENST00000486983 NUPR2A6NF83 97 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms