RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.06
SHROOM3-208ENST00000486758 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.07
SHROOM3-208ENST00000486758 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.07
SHROOM3-208ENST00000486758 H7BZZ5 65 aa8.39□□□□□ -1.07
SHROOM3-208ENST00000486758 WFDC10BQ8IUB3 73 aa8.39□□□□□ -1.07
SHROOM3-208ENST00000486758 Q6ZTC4 211 aa8.39□□□□□ -1.07
SHROOM3-208ENST00000486758 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
SHROOM3-208ENST00000486758 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
SHROOM3-208ENST00000486758 PDE6GP18545 87 aa8.37□□□□□ -1.07
SHROOM3-208ENST00000486758 COX17Q14061 63 aa8.37□□□□□ -1.07
SHROOM3-208ENST00000486758 Q8NDZ9 215 aa8.36□□□□□ -1.07
SHROOM3-208ENST00000486758 OBSCN-AS1Q96MR7 158 aa8.36□□□□□ -1.07
SHROOM3-208ENST00000486758 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
SHROOM3-208ENST00000486758 DEFB131BA0A096LNP1 70 aa8.35□□□□□ -1.07
SHROOM3-208ENST00000486758 RPL37AP8A6NKH3 93 aa8.35□□□□□ -1.07
SHROOM3-208ENST00000486758 A0A0J9YWU9 116 aa8.34□□□□□ -1.07
SHROOM3-208ENST00000486758 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
SHROOM3-208ENST00000486758 LELP1Q5T871 98 aa8.34□□□□□ -1.07
SHROOM3-208ENST00000486758 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
SHROOM3-208ENST00000486758 UBE2BP63146 152 aa8.33□□□□□ -1.08
SHROOM3-208ENST00000486758 PSCAO43653 123 aa8.33□□□□□ -1.08
SHROOM3-208ENST00000486758 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SHROOM3-208ENST00000486758 PSPHP1O15172 72 aa8.32□□□□□ -1.08
SHROOM3-208ENST00000486758 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
SHROOM3-208ENST00000486758 PRYO14603 147 aa8.32□□□□□ -1.08
SHROOM3-208ENST00000486758 DEFB116Q30KQ4 102 aa8.32□□□□□ -1.08
SHROOM3-208ENST00000486758 ANK3Q12955 4377 aaKnown RBP8.31□□□□□ -1.08
SHROOM3-208ENST00000486758 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
SHROOM3-208ENST00000486758 LYPD5Q6UWN5 251 aa8.3□□□□□ -1.08
SHROOM3-208ENST00000486758 UBE2DNLQ8IWF7 75 aa8.3□□□□□ -1.08
SHROOM3-208ENST00000486758 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
SHROOM3-208ENST00000486758 ANK2Q01484 3957 aa8.3□□□□□ -1.08
SHROOM3-208ENST00000486758 NDUFC1O43677 76 aa8.3□□□□□ -1.08
SHROOM3-208ENST00000486758 WFDC13Q8IUB5 93 aa8.28□□□□□ -1.08
SHROOM3-208ENST00000486758 CXCL6P80162 114 aa8.28□□□□□ -1.08
SHROOM3-208ENST00000486758 Q8NAQ8 132 aa8.28□□□□□ -1.08
SHROOM3-208ENST00000486758 SMIM29Q86T20 159 aa8.27□□□□□ -1.08
SHROOM3-208ENST00000486758 Q6ZRU5 148 aa8.27□□□□□ -1.09
SHROOM3-208ENST00000486758 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
SHROOM3-208ENST00000486758 A0A096LNI7 61 aa8.27□□□□□ -1.09
SHROOM3-208ENST00000486758 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
SHROOM3-208ENST00000486758 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
SHROOM3-208ENST00000486758 LOC110117498A0A087WWA1 95 aa8.26□□□□□ -1.09
SHROOM3-208ENST00000486758 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.26□□□□□ -1.09
SHROOM3-208ENST00000486758 M0R378 163 aa8.25□□□□□ -1.09
SHROOM3-208ENST00000486758 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
SHROOM3-208ENST00000486758 ESRGQ1W209 222 aa8.24□□□□□ -1.09
SHROOM3-208ENST00000486758 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
SHROOM3-208ENST00000486758 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
SHROOM3-208ENST00000486758 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
SHROOM3-208ENST00000486758 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
SHROOM3-208ENST00000486758 IGLV6-57P01721 117 aa8.23□□□□□ -1.09
SHROOM3-208ENST00000486758 FBN3Q75N90 2809 aa8.23□□□□□ -1.09
SHROOM3-208ENST00000486758 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
SHROOM3-208ENST00000486758 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
SHROOM3-208ENST00000486758 H3BQ85 93 aa8.22□□□□□ -1.09
SHROOM3-208ENST00000486758 A0A0G2JQZ4 141 aa8.21□□□□□ -1.1
SHROOM3-208ENST00000486758 A0A1W2PNN7 141 aa8.21□□□□□ -1.1
SHROOM3-208ENST00000486758 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
SHROOM3-208ENST00000486758 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
SHROOM3-208ENST00000486758 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
SHROOM3-208ENST00000486758 COL7A1Q02388 2944 aa8.19□□□□□ -1.1
SHROOM3-208ENST00000486758 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
SHROOM3-208ENST00000486758 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
SHROOM3-208ENST00000486758 TRBV7-4A0A0J9YYF1 115 aa8.18□□□□□ -1.1
SHROOM3-208ENST00000486758 LYSTQ99698 3801 aa8.17□□□□□ -1.1
SHROOM3-208ENST00000486758 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
SHROOM3-208ENST00000486758 MP68P56378 58 aa8.17□□□□□ -1.1
SHROOM3-208ENST00000486758 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
SHROOM3-208ENST00000486758 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
SHROOM3-208ENST00000486758 EGFEM1PQ0D2K5 195 aa8.16□□□□□ -1.1
SHROOM3-208ENST00000486758 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
SHROOM3-208ENST00000486758 VPREB1P12018 145 aa8.16□□□□□ -1.1
SHROOM3-208ENST00000486758 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
SHROOM3-208ENST00000486758 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
SHROOM3-208ENST00000486758 Q6ZRP5 223 aa8.15□□□□□ -1.1
SHROOM3-208ENST00000486758 BCE1O60756 84 aa8.14□□□□□ -1.11
SHROOM3-208ENST00000486758 C7orf33Q8WU49 177 aa8.14□□□□□ -1.11
SHROOM3-208ENST00000486758 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
SHROOM3-208ENST00000486758 CD164Q04900 197 aa8.12□□□□□ -1.11
SHROOM3-208ENST00000486758 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
SHROOM3-208ENST00000486758 TGP01266 2768 aa8.11□□□□□ -1.11
SHROOM3-208ENST00000486758 H0Y9J4 135 aa8.11□□□□□ -1.11
SHROOM3-208ENST00000486758 K7EQZ3 153 aa8.11□□□□□ -1.11
SHROOM3-208ENST00000486758 A0A087WSZ3 146 aa8.11□□□□□ -1.11
SHROOM3-208ENST00000486758 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
SHROOM3-208ENST00000486758 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
SHROOM3-208ENST00000486758 NDUFS5O43920 106 aa8.1□□□□□ -1.11
SHROOM3-208ENST00000486758 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
SHROOM3-208ENST00000486758 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
SHROOM3-208ENST00000486758 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.12
SHROOM3-208ENST00000486758 PRLHP81277 87 aa8.09□□□□□ -1.12
SHROOM3-208ENST00000486758 Q8N377 158 aa8.09□□□□□ -1.12
SHROOM3-208ENST00000486758 PRR34Q9NV39 138 aa8.08□□□□□ -1.12
SHROOM3-208ENST00000486758 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
SHROOM3-208ENST00000486758 OCR1Q9BZK8 76 aa8.07□□□□□ -1.12
SHROOM3-208ENST00000486758 A8MUN3 132 aa8.07□□□□□ -1.12
SHROOM3-208ENST00000486758 DHRS4-AS1Q9P1J3 65 aa8.07□□□□□ -1.12
SHROOM3-208ENST00000486758 C15orf56Q8N910 161 aa8.07□□□□□ -1.12
SHROOM3-208ENST00000486758 PRR15LQ9BU68 103 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms