RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
SNX21-211ENST00000486336 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
SNX21-211ENST00000486336 ZNF706Q9Y5V0 76 aaPredicted RBP6.46□□□□□ -1.38
SNX21-211ENST00000486336 DLEU1O43261 78 aa6.45□□□□□ -1.38
SNX21-211ENST00000486336 SPRR1AP35321 89 aa6.45□□□□□ -1.38
SNX21-211ENST00000486336 ANKRD39Q53RE8 183 aa6.45□□□□□ -1.38
SNX21-211ENST00000486336 SOSTDC1Q6X4U4 206 aa6.45□□□□□ -1.38
SNX21-211ENST00000486336 C3orf22Q8N5N4 141 aa6.45□□□□□ -1.38
SNX21-211ENST00000486336 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
SNX21-211ENST00000486336 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
SNX21-211ENST00000486336 NDUFC2O95298 119 aa6.44□□□□□ -1.38
SNX21-211ENST00000486336 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
SNX21-211ENST00000486336 PYY3Q5JQD4 70 aa6.44□□□□□ -1.38
SNX21-211ENST00000486336 TTTY13Q9BZ97 58 aa6.44□□□□□ -1.38
SNX21-211ENST00000486336 B5MCH6 92 aa6.43□□□□□ -1.38
SNX21-211ENST00000486336 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
SNX21-211ENST00000486336 COX8AP10176 69 aa6.43□□□□□ -1.38
SNX21-211ENST00000486336 IFITM1P13164 125 aa6.43□□□□□ -1.38
SNX21-211ENST00000486336 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
SNX21-211ENST00000486336 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
SNX21-211ENST00000486336 CBY1Q9Y3M2 126 aa6.43□□□□□ -1.38
SNX21-211ENST00000486336 LPAP08519 4548 aa6.42□□□□□ -1.38
SNX21-211ENST00000486336 TRAV23DV6A0A075B6W5 121 aa6.42□□□□□ -1.38
SNX21-211ENST00000486336 GAGE2AQ6NT46 116 aa6.42□□□□□ -1.38
SNX21-211ENST00000486336 SLC25A34Q6PIV7 304 aa6.42□□□□□ -1.38
SNX21-211ENST00000486336 LINC00308Q8TCZ7 52 aa6.42□□□□□ -1.38
SNX21-211ENST00000486336 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 SMIM6P0DI80 62 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 C4orf48Q5BLP8 95 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 LINC00518Q8N0U6 118 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 LITAFQ99732 161 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
SNX21-211ENST00000486336 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
SNX21-211ENST00000486336 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.38
SNX21-211ENST00000486336 SPANXCQ9NY87 97 aa6.4□□□□□ -1.38
SNX21-211ENST00000486336 ZNF73O43830 326 aaPredicted RBP6.39□□□□□ -1.39
SNX21-211ENST00000486336 HINT1P49773 126 aaPredicted RBP6.39□□□□□ -1.39
SNX21-211ENST00000486336 Q6ZRX8 168 aa6.39□□□□□ -1.39
SNX21-211ENST00000486336 Q9BRP9 147 aa6.39□□□□□ -1.39
SNX21-211ENST00000486336 HIGD1BQ9P298 99 aa6.39□□□□□ -1.39
SNX21-211ENST00000486336 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
SNX21-211ENST00000486336 Q8NBF4 154 aa6.38□□□□□ -1.39
SNX21-211ENST00000486336 C14orf144Q96I85 54 aa6.38□□□□□ -1.39
SNX21-211ENST00000486336 LOC105371267A0A1B0GV96 52 aa6.37□□□□□ -1.39
SNX21-211ENST00000486336 TAL2Q16559 108 aa6.37□□□□□ -1.39
SNX21-211ENST00000486336 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
SNX21-211ENST00000486336 HIST1H4GQ99525 98 aa6.37□□□□□ -1.39
SNX21-211ENST00000486336 UQCR10Q9UDW1 63 aa6.37□□□□□ -1.39
SNX21-211ENST00000486336 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
SNX21-211ENST00000486336 MOBPQ13875 183 aa6.35□□□□□ -1.39
SNX21-211ENST00000486336 IGLV7-46A0A075B6I9 117 aa6.34□□□□□ -1.39
SNX21-211ENST00000486336 CTAG1AP78358 180 aa6.34□□□□□ -1.39
SNX21-211ENST00000486336 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
SNX21-211ENST00000486336 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
SNX21-211ENST00000486336 TRAV13-2A0A0B4J235 113 aa6.33□□□□□ -1.4
SNX21-211ENST00000486336 TMEM238LA0A1B0GVL6 79 aa6.33□□□□□ -1.4
SNX21-211ENST00000486336 A6NJY4 79 aa6.33□□□□□ -1.4
SNX21-211ENST00000486336 TSTD3H0UI37 97 aa6.33□□□□□ -1.4
SNX21-211ENST00000486336 C9orf153Q5TBE3 101 aa6.33□□□□□ -1.4
SNX21-211ENST00000486336 A6NDN8 102 aa6.32□□□□□ -1.4
SNX21-211ENST00000486336 COX7BP24311 80 aa6.32□□□□□ -1.4
SNX21-211ENST00000486336 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
SNX21-211ENST00000486336 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
SNX21-211ENST00000486336 C12orf57Q99622 126 aa6.31□□□□□ -1.4
SNX21-211ENST00000486336 DHRS4-AS1Q9P1J3 65 aa6.31□□□□□ -1.4
SNX21-211ENST00000486336 SPINK1P00995 79 aa6.3□□□□□ -1.4
SNX21-211ENST00000486336 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
SNX21-211ENST00000486336 HSD52Q0P140 79 aa6.29□□□□□ -1.4
SNX21-211ENST00000486336 CEND1Q8N111 149 aa6.29□□□□□ -1.4
SNX21-211ENST00000486336 DEFB105AQ8NG35 78 aa6.29□□□□□ -1.4
SNX21-211ENST00000486336 A4D1N5 150 aa6.28□□□□□ -1.4
SNX21-211ENST00000486336 ELOF1P60002 83 aaKnown RBP6.28□□□□□ -1.4
SNX21-211ENST00000486336 VAMP3Q15836 100 aa6.28□□□□□ -1.4
SNX21-211ENST00000486336 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
SNX21-211ENST00000486336 C2orf91Q6ZV80 131 aa6.27□□□□□ -1.41
SNX21-211ENST00000486336 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
SNX21-211ENST00000486336 LAMTOR3Q9UHA4 124 aa6.27□□□□□ -1.41
SNX21-211ENST00000486336 M0R143 59 aa6.26□□□□□ -1.41
SNX21-211ENST00000486336 SNCGO76070 127 aa6.26□□□□□ -1.41
SNX21-211ENST00000486336 TPRXLQ17RH7 258 aa6.26□□□□□ -1.41
SNX21-211ENST00000486336 FP248Q71RG6 208 aaPredicted RBP6.26□□□□□ -1.41
SNX21-211ENST00000486336 TRBV7-6A0A0J9YX20 115 aa6.25□□□□□ -1.41
SNX21-211ENST00000486336 A0A1B0GWB2 263 aa6.25□□□□□ -1.41
SNX21-211ENST00000486336 HRCT1Q6UXD1 115 aa6.25□□□□□ -1.41
SNX21-211ENST00000486336 PRO1933Q9H354 126 aa6.25□□□□□ -1.41
SNX21-211ENST00000486336 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
SNX21-211ENST00000486336 SPRR1BP22528 89 aa6.24□□□□□ -1.41
SNX21-211ENST00000486336 Q1RN00 199 aa6.24□□□□□ -1.41
SNX21-211ENST00000486336 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
SNX21-211ENST00000486336 SLC25A20O43772 301 aa6.23□□□□□ -1.41
SNX21-211ENST00000486336 Q8N377 158 aa6.23□□□□□ -1.41
SNX21-211ENST00000486336 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
SNX21-211ENST00000486336 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
SNX21-211ENST00000486336 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
SNX21-211ENST00000486336 BVES-AS1Q5T3Y7 98 aa6.22□□□□□ -1.41
SNX21-211ENST00000486336 NHP2Q9NX24 153 aaKnown RBP6.22□□□□□ -1.41
SNX21-211ENST00000486336 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
SNX21-211ENST00000486336 CFC1P0CG37 223 aa6.21□□□□□ -1.42
SNX21-211ENST00000486336 H0YGX0 51 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms