RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZNF815PA8K554 130 aa11.33□□□□□ -0.6
SNX5-213ENST00000486039 AKR1D1P51857 326 aa11.33□□□□□ -0.6
SNX5-213ENST00000486039 TIMM17BO60830 172 aa11.32□□□□□ -0.6
SNX5-213ENST00000486039 SNRPEP62304 92 aaKnown RBP11.32□□□□□ -0.6
SNX5-213ENST00000486039 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
SNX5-213ENST00000486039 ERC2-IT1O76042 136 aa11.31□□□□□ -0.6
SNX5-213ENST00000486039 Q9BRP9 147 aa11.31□□□□□ -0.6
SNX5-213ENST00000486039 PPDPFQ9H3Y8 114 aa11.31□□□□□ -0.6
SNX5-213ENST00000486039 Q6ZRX8 168 aa11.3□□□□□ -0.6
SNX5-213ENST00000486039 TRAV23DV6A0A075B6W5 121 aa11.29□□□□□ -0.6
SNX5-213ENST00000486039 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
SNX5-213ENST00000486039 LINC00483Q53H64 154 aa11.28□□□□□ -0.6
SNX5-213ENST00000486039 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
SNX5-213ENST00000486039 RETNLBQ9BQ08 111 aa11.28□□□□□ -0.6
SNX5-213ENST00000486039 SPANXCQ9NY87 97 aa11.28□□□□□ -0.6
SNX5-213ENST00000486039 ATOH7Q8N100 152 aa11.27□□□□□ -0.61
SNX5-213ENST00000486039 ZNF73O43830 326 aaPredicted RBP11.26□□□□□ -0.61
SNX5-213ENST00000486039 CTAG1AP78358 180 aa11.26□□□□□ -0.61
SNX5-213ENST00000486039 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
SNX5-213ENST00000486039 MUC2Q02817 5179 aa11.24□□□□□ -0.61
SNX5-213ENST00000486039 JOSD1Q15040 202 aaPredicted RBP11.22□□□□□ -0.61
SNX5-213ENST00000486039 SPAG11AQ6PDA7 123 aa11.22□□□□□ -0.61
SNX5-213ENST00000486039 Q8NBF4 154 aa11.22□□□□□ -0.61
SNX5-213ENST00000486039 OR13C6PQ8NH95 151 aa11.22□□□□□ -0.61
SNX5-213ENST00000486039 SCGB1D4Q6XE38 83 aa11.21□□□□□ -0.61
SNX5-213ENST00000486039 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.61
SNX5-213ENST00000486039 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
SNX5-213ENST00000486039 CBY1Q9Y3M2 126 aa11.19□□□□□ -0.62
SNX5-213ENST00000486039 IGLV9-49A0A0B4J1Y8 123 aa11.17□□□□□ -0.62
SNX5-213ENST00000486039 HSBP1L1C9JCN9 74 aa11.17□□□□□ -0.62
SNX5-213ENST00000486039 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
SNX5-213ENST00000486039 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
SNX5-213ENST00000486039 LINC00518Q8N0U6 118 aa11.17□□□□□ -0.62
SNX5-213ENST00000486039 ST20-AS1Q8NBB2 130 aa11.17□□□□□ -0.62
SNX5-213ENST00000486039 SCGB1D1O95968 90 aa11.16□□□□□ -0.62
SNX5-213ENST00000486039 MOBPQ13875 183 aa11.16□□□□□ -0.62
SNX5-213ENST00000486039 TMA7Q9Y2S6 64 aaKnown RBP11.15□□□□□ -0.62
SNX5-213ENST00000486039 IGLV7-46A0A075B6I9 117 aa11.14□□□□□ -0.63
SNX5-213ENST00000486039 IFITM1P13164 125 aa11.14□□□□□ -0.63
SNX5-213ENST00000486039 SSBP3-AS1Q7Z2R9 100 aa11.14□□□□□ -0.63
SNX5-213ENST00000486039 Q6ZVH6 145 aa11.13□□□□□ -0.63
SNX5-213ENST00000486039 MUSTN1Q8IVN3 82 aa11.13□□□□□ -0.63
SNX5-213ENST00000486039 COPS9Q8WXC6 57 aa11.12□□□□□ -0.63
SNX5-213ENST00000486039 SPINK1P00995 79 aa11.11□□□□□ -0.63
SNX5-213ENST00000486039 ELOF1P60002 83 aaKnown RBP11.11□□□□□ -0.63
SNX5-213ENST00000486039 TPRXLQ17RH7 258 aa11.11□□□□□ -0.63
SNX5-213ENST00000486039 C6orf99Q4VX62 202 aa11.11□□□□□ -0.63
SNX5-213ENST00000486039 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
SNX5-213ENST00000486039 DHRS4-AS1Q9P1J3 65 aa11.1□□□□□ -0.63
SNX5-213ENST00000486039 COX7BP24311 80 aa11.09□□□□□ -0.63
SNX5-213ENST00000486039 SPRR1BP22528 89 aa11.08□□□□□ -0.64
SNX5-213ENST00000486039 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
SNX5-213ENST00000486039 FAT4Q6V0I7 4981 aa11.07□□□□□ -0.64
SNX5-213ENST00000486039 C9orf153Q5TBE3 101 aa11.07□□□□□ -0.64
SNX5-213ENST00000486039 A6NDN8 102 aa11.06□□□□□ -0.64
SNX5-213ENST00000486039 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
SNX5-213ENST00000486039 CDIP1Q9H305 208 aa11.06□□□□□ -0.64
SNX5-213ENST00000486039 RPS29P62273 56 aaKnown RBP11.05□□□□□ -0.64
SNX5-213ENST00000486039 TRBV7-6A0A0J9YX20 115 aa11.04□□□□□ -0.64
SNX5-213ENST00000486039 Q8N377 158 aa11.03□□□□□ -0.64
SNX5-213ENST00000486039 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
SNX5-213ENST00000486039 TRAV13-2A0A0B4J235 113 aa11□□□□□ -0.65
SNX5-213ENST00000486039 SLC25A34Q6PIV7 304 aa11□□□□□ -0.65
SNX5-213ENST00000486039 VAMP8Q9BV40 100 aa11□□□□□ -0.65
SNX5-213ENST00000486039 SMIM11BQ8TCY0 68 aa10.99□□□□□ -0.65
SNX5-213ENST00000486039 LAMTOR3Q9UHA4 124 aa10.99□□□□□ -0.65
SNX5-213ENST00000486039 TAL2Q16559 108 aa10.98□□□□□ -0.65
SNX5-213ENST00000486039 KRTAP13-3Q3SY46 172 aa10.98□□□□□ -0.65
SNX5-213ENST00000486039 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
SNX5-213ENST00000486039 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
SNX5-213ENST00000486039 SLC25A20O43772 301 aa10.97□□□□□ -0.65
SNX5-213ENST00000486039 COX8AP10176 69 aa10.97□□□□□ -0.65
SNX5-213ENST00000486039 SPATA45Q537H7 98 aa10.97□□□□□ -0.65
SNX5-213ENST00000486039 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.65
SNX5-213ENST00000486039 LINC01547P58512 204 aaPredicted RBP10.96□□□□□ -0.65
SNX5-213ENST00000486039 A4D1N5 150 aa10.95□□□□□ -0.66
SNX5-213ENST00000486039 Q1RN00 199 aa10.95□□□□□ -0.66
SNX5-213ENST00000486039 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
SNX5-213ENST00000486039 DLEU1O43261 78 aa10.94□□□□□ -0.66
SNX5-213ENST00000486039 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
SNX5-213ENST00000486039 IGLV5-48A0A075B6I7 105 aa10.92□□□□□ -0.66
SNX5-213ENST00000486039 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
SNX5-213ENST00000486039 HRCT1Q6UXD1 115 aa10.92□□□□□ -0.66
SNX5-213ENST00000486039 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
SNX5-213ENST00000486039 NHP2Q9NX24 153 aaKnown RBP10.89□□□□□ -0.67
SNX5-213ENST00000486039 HIST1H4GQ99525 98 aa10.88□□□□□ -0.67
SNX5-213ENST00000486039 PRO1933Q9H354 126 aa10.87□□□□□ -0.67
SNX5-213ENST00000486039 VAMP3Q15836 100 aa10.86□□□□□ -0.67
SNX5-213ENST00000486039 C12orf57Q99622 126 aa10.86□□□□□ -0.67
SNX5-213ENST00000486039 LIMD2Q9BT23 127 aa10.86□□□□□ -0.67
SNX5-213ENST00000486039 LINC00575Q6W349 94 aa10.85□□□□□ -0.67
SNX5-213ENST00000486039 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
SNX5-213ENST00000486039 HIGD1BQ9P298 99 aa10.85□□□□□ -0.67
SNX5-213ENST00000486039 CD164Q04900 197 aa10.84□□□□□ -0.67
SNX5-213ENST00000486039 A0A0G2JQZ4 141 aa10.83□□□□□ -0.68
SNX5-213ENST00000486039 ASB16-AS1Q495Z4 193 aa10.81□□□□□ -0.68
SNX5-213ENST00000486039 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
SNX5-213ENST00000486039 H7C2G1 150 aa10.8□□□□□ -0.68
SNX5-213ENST00000486039 C2orf91Q6ZV80 131 aa10.8□□□□□ -0.68
SNX5-213ENST00000486039 Q6ZQY7 126 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms