RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
HPS4-214ENST00000485842 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
HPS4-214ENST00000485842 LRP1Q07954 4544 aaKnown RBP7.13□□□□□ -1.27
HPS4-214ENST00000485842 TRAV23DV6A0A075B6W5 121 aa7.12□□□□□ -1.27
HPS4-214ENST00000485842 SPRR1AP35321 89 aa7.12□□□□□ -1.27
HPS4-214ENST00000485842 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
HPS4-214ENST00000485842 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
HPS4-214ENST00000485842 C14orf144Q96I85 54 aa7.12□□□□□ -1.27
HPS4-214ENST00000485842 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
HPS4-214ENST00000485842 KRTAP1-4P0C5Y4 121 aa7.11□□□□□ -1.27
HPS4-214ENST00000485842 LINC00518Q8N0U6 118 aa7.11□□□□□ -1.27
HPS4-214ENST00000485842 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
HPS4-214ENST00000485842 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
HPS4-214ENST00000485842 DLEU1O43261 78 aa7.09□□□□□ -1.27
HPS4-214ENST00000485842 ZNF73O43830 326 aaPredicted RBP7.09□□□□□ -1.27
HPS4-214ENST00000485842 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
HPS4-214ENST00000485842 CBY1Q9Y3M2 126 aa7.09□□□□□ -1.27
HPS4-214ENST00000485842 B5MCH6 92 aa7.08□□□□□ -1.28
HPS4-214ENST00000485842 KRTAP10-8P60410 259 aa7.08□□□□□ -1.28
HPS4-214ENST00000485842 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
HPS4-214ENST00000485842 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
HPS4-214ENST00000485842 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
HPS4-214ENST00000485842 A6NDN8 102 aa7.07□□□□□ -1.28
HPS4-214ENST00000485842 Q6ZRX8 168 aa7.06□□□□□ -1.28
HPS4-214ENST00000485842 SMCR5Q8TEV8 140 aa7.06□□□□□ -1.28
HPS4-214ENST00000485842 A4D1N5 150 aa7.05□□□□□ -1.28
HPS4-214ENST00000485842 RPL13AP40429 203 aaKnown RBP7.05□□□□□ -1.28
HPS4-214ENST00000485842 HINT1P49773 126 aaPredicted RBP7.05□□□□□ -1.28
HPS4-214ENST00000485842 C2orf91Q6ZV80 131 aa7.05□□□□□ -1.28
HPS4-214ENST00000485842 A0A087X002 238 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 TRAV13-2A0A0B4J235 113 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 TMEM238LA0A1B0GVL6 79 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 CRYGAP11844 174 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 C12orf57Q99622 126 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 Q9BRP9 147 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 HIGD1BQ9P298 99 aa7.04□□□□□ -1.28
HPS4-214ENST00000485842 ZNF706Q9Y5V0 76 aaPredicted RBP7.04□□□□□ -1.28
HPS4-214ENST00000485842 ERC2-IT1O76042 136 aa7.03□□□□□ -1.28
HPS4-214ENST00000485842 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
HPS4-214ENST00000485842 COX7BP24311 80 aa7.02□□□□□ -1.29
HPS4-214ENST00000485842 FAM229BQ4G0N7 80 aa7.02□□□□□ -1.29
HPS4-214ENST00000485842 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
HPS4-214ENST00000485842 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
HPS4-214ENST00000485842 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
HPS4-214ENST00000485842 GAGE2AQ6NT46 116 aa7□□□□□ -1.29
HPS4-214ENST00000485842 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
HPS4-214ENST00000485842 TNXBP22105 4242 aa6.98□□□□□ -1.29
HPS4-214ENST00000485842 TAL2Q16559 108 aa6.98□□□□□ -1.29
HPS4-214ENST00000485842 C3orf22Q8N5N4 141 aa6.98□□□□□ -1.29
HPS4-214ENST00000485842 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
HPS4-214ENST00000485842 UQCR10Q9UDW1 63 aa6.98□□□□□ -1.29
HPS4-214ENST00000485842 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
HPS4-214ENST00000485842 HERC1Q15751 4861 aa6.97□□□□□ -1.29
HPS4-214ENST00000485842 CEND1Q8N111 149 aa6.97□□□□□ -1.29
HPS4-214ENST00000485842 ST20-AS1Q8NBB2 130 aa6.97□□□□□ -1.29
HPS4-214ENST00000485842 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
HPS4-214ENST00000485842 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
HPS4-214ENST00000485842 H7C2G1 150 aa6.96□□□□□ -1.3
HPS4-214ENST00000485842 CFC1BP0CG36 223 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 CFC1P0CG37 223 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 FXYD2P54710 66 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 HSD52Q0P140 79 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 PRO1933Q9H354 126 aa6.95□□□□□ -1.3
HPS4-214ENST00000485842 IGLV9-49A0A0B4J1Y8 123 aa6.94□□□□□ -1.3
HPS4-214ENST00000485842 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
HPS4-214ENST00000485842 TSPAN13O95857 204 aa6.93□□□□□ -1.3
HPS4-214ENST00000485842 VAMP3Q15836 100 aa6.93□□□□□ -1.3
HPS4-214ENST00000485842 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
HPS4-214ENST00000485842 GHRHP01286 108 aa6.92□□□□□ -1.3
HPS4-214ENST00000485842 MOBPQ13875 183 aa6.92□□□□□ -1.3
HPS4-214ENST00000485842 LOC105371267A0A1B0GV96 52 aa6.91□□□□□ -1.3
HPS4-214ENST00000485842 SLC25A20O43772 301 aa6.91□□□□□ -1.3
HPS4-214ENST00000485842 Q1RN00 199 aa6.91□□□□□ -1.3
HPS4-214ENST00000485842 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
HPS4-214ENST00000485842 NHP2Q9NX24 153 aaKnown RBP6.91□□□□□ -1.3
HPS4-214ENST00000485842 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
HPS4-214ENST00000485842 Q8NBF4 154 aa6.9□□□□□ -1.3
HPS4-214ENST00000485842 K7ERJ3 54 aa6.89□□□□□ -1.31
HPS4-214ENST00000485842 SPRR1BP22528 89 aa6.89□□□□□ -1.31
HPS4-214ENST00000485842 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
HPS4-214ENST00000485842 LINC00575Q6W349 94 aa6.89□□□□□ -1.31
HPS4-214ENST00000485842 PRO1854Q9UHT4 67 aa6.89□□□□□ -1.31
HPS4-214ENST00000485842 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
HPS4-214ENST00000485842 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
HPS4-214ENST00000485842 hADV29S1A0JD25 119 aa6.87□□□□□ -1.31
HPS4-214ENST00000485842 LAMTOR3Q9UHA4 124 aa6.87□□□□□ -1.31
HPS4-214ENST00000485842 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
HPS4-214ENST00000485842 IGLV5-48A0A075B6I7 105 aa6.85□□□□□ -1.31
HPS4-214ENST00000485842 LINC01547P58512 204 aaPredicted RBP6.85□□□□□ -1.31
HPS4-214ENST00000485842 Q6ZQY7 126 aa6.85□□□□□ -1.31
HPS4-214ENST00000485842 SSBP3-AS1Q7Z2R9 100 aa6.85□□□□□ -1.31
HPS4-214ENST00000485842 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
HPS4-214ENST00000485842 CTAG1AP78358 180 aa6.84□□□□□ -1.31
HPS4-214ENST00000485842 SPAG11AQ6PDA7 123 aa6.84□□□□□ -1.31
HPS4-214ENST00000485842 H0YGX0 51 aa6.83□□□□□ -1.32
HPS4-214ENST00000485842 TRIAP1O43715 76 aa6.83□□□□□ -1.32
HPS4-214ENST00000485842 PRR4Q16378 134 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms