RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 KRTAP4-16G5E9R7 235 aaPredicted RBP9.78□□□□□ -0.84
SMC4-216ENST00000485645 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
SMC4-216ENST00000485645 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
SMC4-216ENST00000485645 Q8NBF4 154 aa9.77□□□□□ -0.85
SMC4-216ENST00000485645 C20orf202A1L168 122 aa9.75□□□□□ -0.85
SMC4-216ENST00000485645 MIEN1Q9BRT3 115 aa9.74□□□□□ -0.85
SMC4-216ENST00000485645 B5MCH6 92 aa9.73□□□□□ -0.85
SMC4-216ENST00000485645 SPINK1P00995 79 aa9.73□□□□□ -0.85
SMC4-216ENST00000485645 DDTP30046 118 aa9.73□□□□□ -0.85
SMC4-216ENST00000485645 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
SMC4-216ENST00000485645 ADAMTSL4-AS1Q5T5F5 129 aa9.73□□□□□ -0.85
SMC4-216ENST00000485645 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
SMC4-216ENST00000485645 TRBV10-2A0A0K0K1G8 114 aa9.72□□□□□ -0.85
SMC4-216ENST00000485645 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
SMC4-216ENST00000485645 ZNF815PA8K554 130 aa9.71□□□□□ -0.86
SMC4-216ENST00000485645 TIMM17BO60830 172 aa9.71□□□□□ -0.86
SMC4-216ENST00000485645 NDUFC2O95298 119 aa9.71□□□□□ -0.86
SMC4-216ENST00000485645 AKR1D1P51857 326 aa9.71□□□□□ -0.86
SMC4-216ENST00000485645 S100A2P29034 98 aa9.7□□□□□ -0.86
SMC4-216ENST00000485645 SOSTDC1Q6X4U4 206 aa9.7□□□□□ -0.86
SMC4-216ENST00000485645 LITAFQ99732 161 aa9.7□□□□□ -0.86
SMC4-216ENST00000485645 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
SMC4-216ENST00000485645 KRTAP9-2Q9BYQ4 174 aa9.7□□□□□ -0.86
SMC4-216ENST00000485645 SPANXB1Q9NS25 103 aaPredicted RBP9.7□□□□□ -0.86
SMC4-216ENST00000485645 EIF4EBP3O60516 100 aaPredicted RBP9.69□□□□□ -0.86
SMC4-216ENST00000485645 ERC2-IT1O76042 136 aa9.69□□□□□ -0.86
SMC4-216ENST00000485645 S100A6P06703 90 aa9.69□□□□□ -0.86
SMC4-216ENST00000485645 ATOH7Q8N100 152 aa9.69□□□□□ -0.86
SMC4-216ENST00000485645 TTTY13Q9BZ97 58 aa9.69□□□□□ -0.86
SMC4-216ENST00000485645 IGLV9-49A0A0B4J1Y8 123 aa9.68□□□□□ -0.86
SMC4-216ENST00000485645 NPC2P61916 151 aa9.68□□□□□ -0.86
SMC4-216ENST00000485645 MOBPQ13875 183 aa9.68□□□□□ -0.86
SMC4-216ENST00000485645 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
SMC4-216ENST00000485645 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
SMC4-216ENST00000485645 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
SMC4-216ENST00000485645 S100A7L2Q5SY68 101 aa9.67□□□□□ -0.86
SMC4-216ENST00000485645 Q6ZRX8 168 aa9.67□□□□□ -0.86
SMC4-216ENST00000485645 Q9BRP9 147 aa9.67□□□□□ -0.86
SMC4-216ENST00000485645 LINC00308Q8TCZ7 52 aa9.66□□□□□ -0.86
SMC4-216ENST00000485645 IGLV6-57P01721 117 aa9.65□□□□□ -0.86
SMC4-216ENST00000485645 RPS29P62273 56 aaKnown RBP9.65□□□□□ -0.86
SMC4-216ENST00000485645 SNRPEP62304 92 aaKnown RBP9.64□□□□□ -0.87
SMC4-216ENST00000485645 JOSD1Q15040 202 aaPredicted RBP9.64□□□□□ -0.87
SMC4-216ENST00000485645 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
SMC4-216ENST00000485645 SCGB1D4Q6XE38 83 aa9.63□□□□□ -0.87
SMC4-216ENST00000485645 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
SMC4-216ENST00000485645 ASB16-AS1Q495Z4 193 aa9.62□□□□□ -0.87
SMC4-216ENST00000485645 Q8N377 158 aa9.62□□□□□ -0.87
SMC4-216ENST00000485645 PCP2Q8IVA1 136 aa9.61□□□□□ -0.87
SMC4-216ENST00000485645 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
SMC4-216ENST00000485645 C5orf52A6NGY3 159 aa9.6□□□□□ -0.87
SMC4-216ENST00000485645 SLC25A20O43772 301 aa9.6□□□□□ -0.87
SMC4-216ENST00000485645 ZNF73O43830 326 aaPredicted RBP9.6□□□□□ -0.87
SMC4-216ENST00000485645 SEC61BP60468 96 aaKnown RBP9.59□□□□□ -0.87
SMC4-216ENST00000485645 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
SMC4-216ENST00000485645 CBY1Q9Y3M2 126 aa9.58□□□□□ -0.88
SMC4-216ENST00000485645 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
SMC4-216ENST00000485645 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
SMC4-216ENST00000485645 Q6ZVH6 145 aa9.57□□□□□ -0.88
SMC4-216ENST00000485645 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
SMC4-216ENST00000485645 IFITM1P13164 125 aa9.56□□□□□ -0.88
SMC4-216ENST00000485645 LINC00518Q8N0U6 118 aa9.56□□□□□ -0.88
SMC4-216ENST00000485645 OR13C6PQ8NH95 151 aa9.56□□□□□ -0.88
SMC4-216ENST00000485645 ST20-AS1Q8NBB2 130 aa9.55□□□□□ -0.88
SMC4-216ENST00000485645 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
SMC4-216ENST00000485645 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
SMC4-216ENST00000485645 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.89
SMC4-216ENST00000485645 LINC01547P58512 204 aaPredicted RBP9.51□□□□□ -0.89
SMC4-216ENST00000485645 XP32Q5T750 250 aa9.5□□□□□ -0.89
SMC4-216ENST00000485645 SLC25A34Q6PIV7 304 aa9.49□□□□□ -0.89
SMC4-216ENST00000485645 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
SMC4-216ENST00000485645 SPRR1BP22528 89 aa9.48□□□□□ -0.89
SMC4-216ENST00000485645 LIMD2Q9BT23 127 aa9.46□□□□□ -0.9
SMC4-216ENST00000485645 A6NDN8 102 aa9.45□□□□□ -0.9
SMC4-216ENST00000485645 C6orf99Q4VX62 202 aa9.45□□□□□ -0.9
SMC4-216ENST00000485645 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
SMC4-216ENST00000485645 LAMTOR3Q9UHA4 124 aa9.45□□□□□ -0.9
SMC4-216ENST00000485645 COX8AP10176 69 aa9.44□□□□□ -0.9
SMC4-216ENST00000485645 COX7BP24311 80 aa9.44□□□□□ -0.9
SMC4-216ENST00000485645 ELOF1P60002 83 aaKnown RBP9.44□□□□□ -0.9
SMC4-216ENST00000485645 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
SMC4-216ENST00000485645 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
SMC4-216ENST00000485645 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
SMC4-216ENST00000485645 DLEU1O43261 78 aa9.41□□□□□ -0.9
SMC4-216ENST00000485645 TAL2Q16559 108 aa9.41□□□□□ -0.9
SMC4-216ENST00000485645 A0A1B0GWB2 263 aa9.39□□□□□ -0.91
SMC4-216ENST00000485645 A4D1N5 150 aa9.39□□□□□ -0.91
SMC4-216ENST00000485645 DEFB105AQ8NG35 78 aa9.39□□□□□ -0.91
SMC4-216ENST00000485645 Q1RN00 199 aa9.38□□□□□ -0.91
SMC4-216ENST00000485645 SMIM11BQ8TCY0 68 aa9.38□□□□□ -0.91
SMC4-216ENST00000485645 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
SMC4-216ENST00000485645 PAM16Q9Y3D7 125 aa9.38□□□□□ -0.91
SMC4-216ENST00000485645 TEX49A0A1B0GTD5 131 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 C9orf92A6NGG3 77 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 CD164Q04900 197 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 C14orf144Q96I85 54 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 HIST1H4GQ99525 98 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
SMC4-216ENST00000485645 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms