RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 Q6ZQT0 140 aa5.2□□□□□ -1.58
USP4-211ENST00000485450 Q8N814 137 aa5.2□□□□□ -1.58
USP4-211ENST00000485450 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
USP4-211ENST00000485450 TMEM254Q8TBM7 123 aa5.2□□□□□ -1.58
USP4-211ENST00000485450 hDV103S1A0JD37 113 aa5.2□□□□□ -1.58
USP4-211ENST00000485450 C16orf74Q96GX8 76 aa5.2□□□□□ -1.58
USP4-211ENST00000485450 TRBV6-4A0A1B0GX49 114 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 INSP01308 110 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 SPINK13Q1W4C9 94 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 Q6ZVQ6 151 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 Q8N3U1 123 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 IGHV3-53P01767 116 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 PRB2P02812 416 aaPredicted RBP5.19□□□□□ -1.58
USP4-211ENST00000485450 COX7B2Q8TF08 81 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 TENM3Q9P273 2699 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 LINC00158P58513 81 aa5.19□□□□□ -1.58
USP4-211ENST00000485450 A6NN06 94 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 IGKV3-20P01619 116 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 NREPQ16612 68 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 HAMPP81172 84 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 SYCNQ0VAF6 134 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 IGHV4-28A0A0C4DH34 117 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 CDC42SE2Q9NRR3 84 aa5.18□□□□□ -1.58
USP4-211ENST00000485450 K7EQD1 137 aa5.17□□□□□ -1.58
USP4-211ENST00000485450 M0R2N4 97 aa5.17□□□□□ -1.58
USP4-211ENST00000485450 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
USP4-211ENST00000485450 PRYO14603 147 aa5.17□□□□□ -1.58
USP4-211ENST00000485450 FUSP35637 526 aaKnown RBP eCLIP5.17□□□□□ -1.58
USP4-211ENST00000485450 CASC10Q5T4H9 136 aa5.17□□□□□ -1.58
USP4-211ENST00000485450 C16orf90A8MZG2 172 aa5.16□□□□□ -1.58
USP4-211ENST00000485450 PSPHP1O15172 72 aa5.16□□□□□ -1.58
USP4-211ENST00000485450 MGAM2Q2M2H8 2515 aa5.16□□□□□ -1.58
USP4-211ENST00000485450 LRCOL1A6NCL2 159 aa5.16□□□□□ -1.58
USP4-211ENST00000485450 PHF5AQ7RTV0 110 aaKnown RBP5.16□□□□□ -1.58
USP4-211ENST00000485450 MUC7Q8TAX7 377 aa5.16□□□□□ -1.58
USP4-211ENST00000485450 NOTCH3Q9UM47 2321 aa5.16□□□□□ -1.58
USP4-211ENST00000485450 NANOS2P60321 138 aaKnown RBP5.15□□□□□ -1.58
USP4-211ENST00000485450 APLNQ9ULZ1 77 aa5.15□□□□□ -1.58
USP4-211ENST00000485450 DYNC1H1Q14204 4646 aaKnown RBP5.15□□□□□ -1.58
USP4-211ENST00000485450 TRBV10-1A0A0K0K1A3 114 aa5.15□□□□□ -1.59
USP4-211ENST00000485450 NUPR2A6NF83 97 aa5.15□□□□□ -1.59
USP4-211ENST00000485450 ZNF73O43830 326 aaPredicted RBP5.15□□□□□ -1.59
USP4-211ENST00000485450 Q5VV11 94 aa5.15□□□□□ -1.59
USP4-211ENST00000485450 BPY2O14599 106 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 PDE6GP18545 87 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 DEFB135Q30KP9 77 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 NTM-AS1Q6ZSK4 140 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 FAM30AQ9NZY2 134 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 A0A0J9YWU9 116 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 CELA1Q9UNI1 258 aa5.14□□□□□ -1.59
USP4-211ENST00000485450 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
USP4-211ENST00000485450 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
USP4-211ENST00000485450 HTN1P15515 57 aa5.13□□□□□ -1.59
USP4-211ENST00000485450 OCR1Q9BZK8 76 aa5.13□□□□□ -1.59
USP4-211ENST00000485450 LCA10Q71F78 164 aa5.12□□□□□ -1.59
USP4-211ENST00000485450 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
USP4-211ENST00000485450 A8MUN3 132 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 LCE6AA0A183 80 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 LINC00575Q6W349 94 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 WNK1Q9H4A3 2382 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 PRM2P04554 102 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 SPART-AS1P0CW21 52 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 SORL1Q92673 2214 aa5.11□□□□□ -1.59
USP4-211ENST00000485450 NOTCH1P46531 2555 aa5.1□□□□□ -1.59
USP4-211ENST00000485450 IGHV3OR16-9A0A0B4J2B5 98 aa5.1□□□□□ -1.59
USP4-211ENST00000485450 H3BQ85 93 aa5.09□□□□□ -1.59
USP4-211ENST00000485450 SCXQ7RTU7 201 aa5.09□□□□□ -1.59
USP4-211ENST00000485450 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.6
USP4-211ENST00000485450 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.6
USP4-211ENST00000485450 UBE2L6O14933 153 aa5.08□□□□□ -1.6
USP4-211ENST00000485450 C6orf99Q4VX62 202 aa5.08□□□□□ -1.6
USP4-211ENST00000485450 Q6ZR54 194 aa5.08□□□□□ -1.6
USP4-211ENST00000485450 PSCAO43653 123 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 PRR3P79522 188 aaKnown RBP5.07□□□□□ -1.6
USP4-211ENST00000485450 DIRC1Q969H9 104 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 LINC00269Q8N2A0 174 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 UBE2BP63146 152 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 LINC00476Q8WZB0 136 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
USP4-211ENST00000485450 NDUFS5O43920 106 aa5.06□□□□□ -1.6
USP4-211ENST00000485450 PLA2G1BP04054 148 aaKnown RBP5.05□□□□□ -1.6
USP4-211ENST00000485450 TGP01266 2768 aa5.05□□□□□ -1.6
USP4-211ENST00000485450 ZCCHC13Q8WW36 166 aaKnown RBP5.05□□□□□ -1.6
USP4-211ENST00000485450 C7orf65Q6ZTY9 151 aa5.04□□□□□ -1.6
USP4-211ENST00000485450 Q8IZM0 81 aa5.04□□□□□ -1.6
USP4-211ENST00000485450 A0A096LPF7 62 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 IGKV3OR2-268A0A0C4DH90 116 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 COX17Q14061 63 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 Q6ZQY7 126 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 CYP4F30PQ9H0H9 118 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 IGLV4-60A0A075B6I1 120 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 Q8N9L7 120 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 PLA2G2DQ9UNK4 145 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 NOP10Q9NPE3 64 aaKnown RBP5.03□□□□□ -1.6
USP4-211ENST00000485450 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
USP4-211ENST00000485450 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
USP4-211ENST00000485450 NBEAL2Q6ZNJ1 2754 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms