RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
HLA-DQB1-208ENST00000484729 NCR3O14931 201 aa8.77□□□□□ -1.01
HLA-DQB1-208ENST00000484729 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
HLA-DQB1-208ENST00000484729 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQB1-208ENST00000484729 NPC2P61916 151 aa8.76□□□□□ -1.01
HLA-DQB1-208ENST00000484729 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
HLA-DQB1-208ENST00000484729 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
HLA-DQB1-208ENST00000484729 PRYO14603 147 aa8.75□□□□□ -1.01
HLA-DQB1-208ENST00000484729 TIMM17BO60830 172 aa8.75□□□□□ -1.01
HLA-DQB1-208ENST00000484729 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQB1-208ENST00000484729 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
HLA-DQB1-208ENST00000484729 VAMP8Q9BV40 100 aa8.74□□□□□ -1.01
HLA-DQB1-208ENST00000484729 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
HLA-DQB1-208ENST00000484729 ADAMTSL4-AS1Q5T5F5 129 aa8.73□□□□□ -1.01
HLA-DQB1-208ENST00000484729 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
HLA-DQB1-208ENST00000484729 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
HLA-DQB1-208ENST00000484729 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
HLA-DQB1-208ENST00000484729 LITAFQ99732 161 aa8.72□□□□□ -1.01
HLA-DQB1-208ENST00000484729 PAM16Q9Y3D7 125 aa8.72□□□□□ -1.01
HLA-DQB1-208ENST00000484729 SPATA45Q537H7 98 aa8.71□□□□□ -1.02
HLA-DQB1-208ENST00000484729 Q8NBF4 154 aa8.71□□□□□ -1.02
HLA-DQB1-208ENST00000484729 SPRR1AP35321 89 aa8.7□□□□□ -1.02
HLA-DQB1-208ENST00000484729 FP248Q71RG6 208 aaPredicted RBP8.7□□□□□ -1.02
HLA-DQB1-208ENST00000484729 SMCR5Q8TEV8 140 aa8.7□□□□□ -1.02
HLA-DQB1-208ENST00000484729 KCNQ1DNQ9H478 68 aa8.7□□□□□ -1.02
HLA-DQB1-208ENST00000484729 LOC107984156A0A0G2JMH3 177 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 TRBV10-3A0A0K0K1G6 114 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 PYY3Q5JQD4 70 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 ARL17AQ8IVW1 177 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
HLA-DQB1-208ENST00000484729 COX8AP10176 69 aa8.68□□□□□ -1.02
HLA-DQB1-208ENST00000484729 S100A12P80511 92 aa8.68□□□□□ -1.02
HLA-DQB1-208ENST00000484729 COPS9Q8WXC6 57 aa8.68□□□□□ -1.02
HLA-DQB1-208ENST00000484729 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQB1-208ENST00000484729 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
HLA-DQB1-208ENST00000484729 ASB16-AS1Q495Z4 193 aa8.67□□□□□ -1.02
HLA-DQB1-208ENST00000484729 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
HLA-DQB1-208ENST00000484729 NDUFC2O95298 119 aa8.66□□□□□ -1.02
HLA-DQB1-208ENST00000484729 GAGE2AQ6NT46 116 aa8.66□□□□□ -1.02
HLA-DQB1-208ENST00000484729 Q6ZVH6 145 aa8.65□□□□□ -1.02
HLA-DQB1-208ENST00000484729 C14orf144Q96I85 54 aa8.65□□□□□ -1.02
HLA-DQB1-208ENST00000484729 TRBV10-2A0A0K0K1G8 114 aa8.64□□□□□ -1.03
HLA-DQB1-208ENST00000484729 SPINK1P00995 79 aa8.64□□□□□ -1.03
HLA-DQB1-208ENST00000484729 IFITM1P13164 125 aa8.64□□□□□ -1.03
HLA-DQB1-208ENST00000484729 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
HLA-DQB1-208ENST00000484729 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
HLA-DQB1-208ENST00000484729 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
HLA-DQB1-208ENST00000484729 B5MCH6 92 aa8.63□□□□□ -1.03
HLA-DQB1-208ENST00000484729 DDTP30046 118 aa8.63□□□□□ -1.03
HLA-DQB1-208ENST00000484729 MOBPQ13875 183 aa8.63□□□□□ -1.03
HLA-DQB1-208ENST00000484729 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
HLA-DQB1-208ENST00000484729 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
HLA-DQB1-208ENST00000484729 DLEU1O43261 78 aa8.62□□□□□ -1.03
HLA-DQB1-208ENST00000484729 ERC2-IT1O76042 136 aa8.62□□□□□ -1.03
HLA-DQB1-208ENST00000484729 MUSTN1Q8IVN3 82 aa8.62□□□□□ -1.03
HLA-DQB1-208ENST00000484729 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
HLA-DQB1-208ENST00000484729 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
HLA-DQB1-208ENST00000484729 Q6ZRX8 168 aa8.59□□□□□ -1.03
HLA-DQB1-208ENST00000484729 LINC00518Q8N0U6 118 aa8.59□□□□□ -1.03
HLA-DQB1-208ENST00000484729 Q9BRP9 147 aa8.59□□□□□ -1.03
HLA-DQB1-208ENST00000484729 SEC61BP60468 96 aaKnown RBP8.58□□□□□ -1.04
HLA-DQB1-208ENST00000484729 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
HLA-DQB1-208ENST00000484729 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
HLA-DQB1-208ENST00000484729 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
HLA-DQB1-208ENST00000484729 SMIM6P0DI80 62 aa8.57□□□□□ -1.04
HLA-DQB1-208ENST00000484729 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
HLA-DQB1-208ENST00000484729 CBY1Q9Y3M2 126 aa8.57□□□□□ -1.04
HLA-DQB1-208ENST00000484729 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
HLA-DQB1-208ENST00000484729 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
HLA-DQB1-208ENST00000484729 Q8N377 158 aa8.56□□□□□ -1.04
HLA-DQB1-208ENST00000484729 C9orf153Q5TBE3 101 aa8.55□□□□□ -1.04
HLA-DQB1-208ENST00000484729 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
HLA-DQB1-208ENST00000484729 A6NDN8 102 aa8.54□□□□□ -1.04
HLA-DQB1-208ENST00000484729 LOC105371267A0A1B0GV96 52 aa8.53□□□□□ -1.04
HLA-DQB1-208ENST00000484729 A4D1N5 150 aa8.53□□□□□ -1.04
HLA-DQB1-208ENST00000484729 SLC25A20O43772 301 aa8.53□□□□□ -1.04
HLA-DQB1-208ENST00000484729 UQCR10Q9UDW1 63 aa8.53□□□□□ -1.04
HLA-DQB1-208ENST00000484729 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.05
HLA-DQB1-208ENST00000484729 ZNF73O43830 326 aaPredicted RBP8.52□□□□□ -1.05
HLA-DQB1-208ENST00000484729 C12orf57Q99622 126 aa8.52□□□□□ -1.05
HLA-DQB1-208ENST00000484729 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
HLA-DQB1-208ENST00000484729 MT1HP80294 61 aa8.5□□□□□ -1.05
HLA-DQB1-208ENST00000484729 TAL2Q16559 108 aa8.5□□□□□ -1.05
HLA-DQB1-208ENST00000484729 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
HLA-DQB1-208ENST00000484729 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
HLA-DQB1-208ENST00000484729 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
HLA-DQB1-208ENST00000484729 HSD52Q0P140 79 aa8.48□□□□□ -1.05
HLA-DQB1-208ENST00000484729 CEND1Q8N111 149 aa8.48□□□□□ -1.05
HLA-DQB1-208ENST00000484729 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
HLA-DQB1-208ENST00000484729 A6NJY4 79 aa8.47□□□□□ -1.05
HLA-DQB1-208ENST00000484729 C6orf99Q4VX62 202 aa8.47□□□□□ -1.05
HLA-DQB1-208ENST00000484729 RAB37Q96AX2 223 aa8.47□□□□□ -1.05
HLA-DQB1-208ENST00000484729 XP32Q5T750 250 aa8.46□□□□□ -1.06
HLA-DQB1-208ENST00000484729 COX7BP24311 80 aa8.45□□□□□ -1.06
HLA-DQB1-208ENST00000484729 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
HLA-DQB1-208ENST00000484729 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
HLA-DQB1-208ENST00000484729 A0A0B4J2C4 111 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms