RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 UBE2BP63146 152 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 Q5VSD8 79 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 CEND1Q8N111 149 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 PRO1933Q9H354 126 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 KCNQ1DNQ9H478 68 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 RPL37AP8A6NKH3 93 aa3.95□□□□□ -1.78
NCL-209ENST00000484328 KRTAP4-16G5E9R7 235 aaPredicted RBP3.95□□□□□ -1.78
NCL-209ENST00000484328 TSTD3H0UI37 97 aa3.95□□□□□ -1.78
NCL-209ENST00000484328 PRYO14603 147 aa3.95□□□□□ -1.78
NCL-209ENST00000484328 PLA2G1BP04054 148 aaKnown RBP3.95□□□□□ -1.78
NCL-209ENST00000484328 DDTP30046 118 aa3.95□□□□□ -1.78
NCL-209ENST00000484328 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
NCL-209ENST00000484328 TMEM126AQ9H061 195 aa3.95□□□□□ -1.78
NCL-209ENST00000484328 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
NCL-209ENST00000484328 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
NCL-209ENST00000484328 A0A0B4J2C4 111 aa3.94□□□□□ -1.78
NCL-209ENST00000484328 BCE1O60756 84 aa3.94□□□□□ -1.78
NCL-209ENST00000484328 FXYD2P54710 66 aa3.94□□□□□ -1.78
NCL-209ENST00000484328 REG3GQ6UW15 175 aa3.94□□□□□ -1.78
NCL-209ENST00000484328 TRAV13-2A0A0B4J235 113 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 TMEM238LA0A1B0GVL6 79 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 A6NJY4 79 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 H0Y9J4 135 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 C1orf137Q5JT78 98 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 S100A7L2Q5SY68 101 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 CBY1Q9Y3M2 126 aa3.93□□□□□ -1.78
NCL-209ENST00000484328 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
NCL-209ENST00000484328 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
NCL-209ENST00000484328 CFC1P0CG37 223 aa3.92□□□□□ -1.78
NCL-209ENST00000484328 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
NCL-209ENST00000484328 A6NDN8 102 aa3.91□□□□□ -1.78
NCL-209ENST00000484328 B5MCH6 92 aa3.91□□□□□ -1.78
NCL-209ENST00000484328 RPL13AP40429 203 aaKnown RBP3.91□□□□□ -1.78
NCL-209ENST00000484328 BVES-AS1Q5T3Y7 98 aa3.91□□□□□ -1.78
NCL-209ENST00000484328 Q6ZRX8 168 aa3.91□□□□□ -1.78
NCL-209ENST00000484328 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
NCL-209ENST00000484328 TRBV7-6A0A0J9YX20 115 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 M0R143 59 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 ZNF861PO60384 105 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 RPL28P46779 137 aaKnown RBP3.9□□□□□ -1.79
NCL-209ENST00000484328 ELOF1P60002 83 aaKnown RBP3.9□□□□□ -1.79
NCL-209ENST00000484328 CTAG1AP78358 180 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 PRLHP81277 87 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 C6orf99Q4VX62 202 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 SPINK6Q6UWN8 80 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 DIRC1Q969H9 104 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.79
NCL-209ENST00000484328 PRO1854Q9UHT4 67 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.79
NCL-209ENST00000484328 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
NCL-209ENST00000484328 K7ERJ3 54 aa3.89□□□□□ -1.79
NCL-209ENST00000484328 FAM19A1Q7Z5A9 133 aa3.89□□□□□ -1.79
NCL-209ENST00000484328 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
NCL-209ENST00000484328 RAB37Q96AX2 223 aa3.89□□□□□ -1.79
NCL-209ENST00000484328 Q9BRP9 147 aa3.89□□□□□ -1.79
NCL-209ENST00000484328 PKHD1L1Q86WI1 4243 aa3.88□□□□□ -1.79
NCL-209ENST00000484328 UBE2AP49459 152 aa3.88□□□□□ -1.79
NCL-209ENST00000484328 HINT1P49773 126 aaPredicted RBP3.88□□□□□ -1.79
NCL-209ENST00000484328 TSPAN13O95857 204 aa3.87□□□□□ -1.79
NCL-209ENST00000484328 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
NCL-209ENST00000484328 COX7BP24311 80 aa3.87□□□□□ -1.79
NCL-209ENST00000484328 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
NCL-209ENST00000484328 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
NCL-209ENST00000484328 HIGD2AQ9BW72 106 aa3.86□□□□□ -1.79
NCL-209ENST00000484328 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
NCL-209ENST00000484328 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
NCL-209ENST00000484328 H7C2G1 150 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 TRIAP1O43715 76 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 ERC2-IT1O76042 136 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 LINC00483Q53H64 154 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 LINC00575Q6W349 94 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 SPRR4Q96PI1 79 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 SNHG12Q9BXW3 62 aa3.85□□□□□ -1.79
NCL-209ENST00000484328 VAMP3Q15836 100 aa3.84□□□□□ -1.79
NCL-209ENST00000484328 Q1RN00 199 aa3.84□□□□□ -1.79
NCL-209ENST00000484328 ZNF706Q9Y5V0 76 aaPredicted RBP3.84□□□□□ -1.79
NCL-209ENST00000484328 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
NCL-209ENST00000484328 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.79
NCL-209ENST00000484328 IGLV5-48A0A075B6I7 105 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 A0A1B0GX51 115 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
NCL-209ENST00000484328 H0YGX0 51 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 SPRR1BP22528 89 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 FAM229BQ4G0N7 80 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 LINC01600Q96MT4 127 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
NCL-209ENST00000484328 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
NCL-209ENST00000484328 OXTP01178 125 aa3.82□□□□□ -1.8
NCL-209ENST00000484328 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
NCL-209ENST00000484328 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
NCL-209ENST00000484328 BATFQ16520 125 aa3.82□□□□□ -1.8
NCL-209ENST00000484328 ST20-AS1Q8NBB2 130 aa3.82□□□□□ -1.8
NCL-209ENST00000484328 A0A087X002 238 aa3.81□□□□□ -1.8
NCL-209ENST00000484328 hADV29S1A0JD25 119 aa3.81□□□□□ -1.8
NCL-209ENST00000484328 PCP4L1A6NKN8 68 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms