RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TMEM238C9JI98 176 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 H0Y8G0 127 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 SERF1AO75920 110 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 IGKCP01834 107 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 SMIM13P0DJ93 91 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 LGALS3P17931 250 aaKnown RBP3.62□□□□□ -1.83
PTCD3-215ENST00000484203 PRLHP81277 87 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 ARL17AQ8IVW1 177 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 LINC00304Q8N9R0 145 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 KCNQ1DNQ9H478 68 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 A0A0U1RQV1 116 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 A0A0U1RRA0 63 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 J3QQQ9 107 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 NDUFC2O95298 119 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 TSPAN13O95857 204 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 AKR1D1P51857 326 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 JOSD1Q15040 202 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-215ENST00000484203 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
PTCD3-215ENST00000484203 SPANXB1Q9NS25 103 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-215ENST00000484203 COLCA2A8K830 154 aa3.6□□□□□ -1.83
PTCD3-215ENST00000484203 SMIM6P0DI80 62 aa3.6□□□□□ -1.83
PTCD3-215ENST00000484203 FABP4P15090 132 aa3.6□□□□□ -1.83
PTCD3-215ENST00000484203 SPRR1AP35321 89 aa3.6□□□□□ -1.83
PTCD3-215ENST00000484203 HINT1P49773 126 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-215ENST00000484203 C5orf52A6NGY3 159 aa3.59□□□□□ -1.83
PTCD3-215ENST00000484203 DDTP30046 118 aa3.59□□□□□ -1.83
PTCD3-215ENST00000484203 S100A7L2Q5SY68 101 aa3.59□□□□□ -1.83
PTCD3-215ENST00000484203 COPS9Q8WXC6 57 aa3.59□□□□□ -1.83
PTCD3-215ENST00000484203 SPRR4Q96PI1 79 aa3.59□□□□□ -1.83
PTCD3-215ENST00000484203 ANAPC11Q9NYG5 84 aa3.59□□□□□ -1.83
PTCD3-215ENST00000484203 TRBV10-3A0A0K0K1G6 114 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 E9PLD3 99 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 NCR3O14931 201 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 TIMM17BO60830 172 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 SPINK1P00995 79 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 PET117Q6UWS5 81 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 FP248Q71RG6 208 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-215ENST00000484203 Q8NDZ9 215 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
PTCD3-215ENST00000484203 C20orf202A1L168 122 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-215ENST00000484203 SYS1-DBNDD2H3BUS1 97 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 IGLV6-57P01721 117 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 SLC25A34Q6PIV7 304 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 SSBP3-AS1Q7Z2R9 100 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 SMCR5Q8TEV8 140 aa3.57□□□□□ -1.84
PTCD3-215ENST00000484203 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 TRAV23DV6A0A075B6W5 121 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 ZNF73O43830 326 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BKO60814 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BJP06899 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BOP23527 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BBP33778 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BDP58876 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-215ENST00000484203 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BCP62807 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST2H2BEQ16778 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-215ENST00000484203 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 Q6ZRX8 168 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 SMIM29Q86T20 159 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 SPANXCQ9NY87 97 aa3.56□□□□□ -1.84
PTCD3-215ENST00000484203 A0A0J9YXY3 114 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 S100A6P06703 90 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 MT3P25713 68 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 SNRPEP62304 92 aaKnown RBP3.55□□□□□ -1.84
PTCD3-215ENST00000484203 GAGE2AQ6NT46 116 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 DAND5Q8N907 189 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 PMCHL2Q9BQD1 86 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 DHRS4-AS1Q9P1J3 65 aa3.55□□□□□ -1.84
PTCD3-215ENST00000484203 MUC2Q02817 5179 aa3.54□□□□□ -1.84
PTCD3-215ENST00000484203 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-215ENST00000484203 COA6Q5JTJ3 125 aaKnown RBP3.54□□□□□ -1.84
PTCD3-215ENST00000484203 Q6ZVH6 145 aa3.54□□□□□ -1.84
PTCD3-215ENST00000484203 C3orf22Q8N5N4 141 aa3.54□□□□□ -1.84
PTCD3-215ENST00000484203 Q8NBF4 154 aa3.54□□□□□ -1.84
PTCD3-215ENST00000484203 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
PTCD3-215ENST00000484203 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
PTCD3-215ENST00000484203 SLC25A20O43772 301 aa3.53□□□□□ -1.84
PTCD3-215ENST00000484203 IFITM1P13164 125 aa3.53□□□□□ -1.84
PTCD3-215ENST00000484203 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.84
PTCD3-215ENST00000484203 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
PTCD3-215ENST00000484203 LINC00308Q8TCZ7 52 aa3.53□□□□□ -1.84
PTCD3-215ENST00000484203 TRBV7-6A0A0J9YX20 115 aa3.52□□□□□ -1.85
PTCD3-215ENST00000484203 SCGB1D1O95968 90 aa3.52□□□□□ -1.85
PTCD3-215ENST00000484203 ADAMTSL4-AS1Q5T5F5 129 aa3.52□□□□□ -1.85
PTCD3-215ENST00000484203 Q9BRP9 147 aa3.52□□□□□ -1.85
PTCD3-215ENST00000484203 LPAP08519 4548 aa3.52□□□□□ -1.85
PTCD3-215ENST00000484203 IGLV9-49A0A0B4J1Y8 123 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 A4D1N5 150 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms