RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TMEM170BQ5T4T1 132 aa3.31□□□□□ -1.88
CSDE1-207ENST00000483407 DAND5Q8N907 189 aa3.31□□□□□ -1.88
CSDE1-207ENST00000483407 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
CSDE1-207ENST00000483407 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
CSDE1-207ENST00000483407 S100A12P80511 92 aa3.3□□□□□ -1.88
CSDE1-207ENST00000483407 FABP9Q0Z7S8 132 aa3.3□□□□□ -1.88
CSDE1-207ENST00000483407 FAM19A2Q8N3H0 131 aa3.3□□□□□ -1.88
CSDE1-207ENST00000483407 Q8NDZ9 215 aa3.3□□□□□ -1.88
CSDE1-207ENST00000483407 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
CSDE1-207ENST00000483407 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 C11orf86A6NJI1 115 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 HBDP02042 147 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 LINC00614P0C842 121 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
CSDE1-207ENST00000483407 BAGE3Q86Y29 109 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 BOD1L2Q8IYS8 172 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 SMCR5Q8TEV8 140 aa3.29□□□□□ -1.88
CSDE1-207ENST00000483407 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 LINC00587B1AMM8 73 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 NCR3O14931 201 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 SPRR1AP35321 89 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
CSDE1-207ENST00000483407 A0A096LNJ9 63 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 SLC25A20O43772 301 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 MOBPQ13875 183 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 PMCHL1Q16048 86 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 CLLU1Q5K131 121 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 SSBP3-AS1Q7Z2R9 100 aa3.27□□□□□ -1.89
CSDE1-207ENST00000483407 CHTOPQ9Y3Y2 248 aaKnown RBP3.27□□□□□ -1.89
CSDE1-207ENST00000483407 TRBV10-3A0A0K0K1G6 114 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-207ENST00000483407 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 MIR7-3HGQ8N6C7 128 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 C18orf32Q8TCD1 76 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 MAP1LC3CQ9BXW4 147 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 TRAPPC1Q9Y5R8 145 aa3.26□□□□□ -1.89
CSDE1-207ENST00000483407 RHEBQ15382 184 aa3.25□□□□□ -1.89
CSDE1-207ENST00000483407 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
CSDE1-207ENST00000483407 TRAV12-1A0A0B4J245 112 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 MYMXA0A1B0GTQ4 84 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 E9PLD3 99 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 DDTP30046 118 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 JOSD1Q15040 202 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-207ENST00000483407 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 Q6ZRX8 168 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 IFI27L1Q96BM0 104 aa3.24□□□□□ -1.89
CSDE1-207ENST00000483407 TRBV10-2A0A0K0K1G8 114 aa3.23□□□□□ -1.89
CSDE1-207ENST00000483407 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
CSDE1-207ENST00000483407 MIEN1Q9BRT3 115 aa3.23□□□□□ -1.89
CSDE1-207ENST00000483407 CXCL6P80162 114 aa3.22□□□□□ -1.89
CSDE1-207ENST00000483407 IFITM2Q01629 132 aa3.22□□□□□ -1.89
CSDE1-207ENST00000483407 S100A7L2Q5SY68 101 aa3.22□□□□□ -1.89
CSDE1-207ENST00000483407 COMMD7Q86VX2 200 aa3.22□□□□□ -1.89
CSDE1-207ENST00000483407 CHCHD1Q96BP2 118 aaKnown RBP3.22□□□□□ -1.89
CSDE1-207ENST00000483407 Q9BRP9 147 aa3.22□□□□□ -1.89
CSDE1-207ENST00000483407 LIMD2Q9BT23 127 aa3.22□□□□□ -1.89
CSDE1-207ENST00000483407 SPANXB1Q9NS25 103 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-207ENST00000483407 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 TRAV23DV6A0A075B6W5 121 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 LOC107984156A0A0G2JMH3 177 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 PCP4L1A6NKN8 68 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 HINT1P49773 126 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-207ENST00000483407 Q1RN00 199 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 SLC25A34Q6PIV7 304 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 ARL17AQ8IVW1 177 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 CBY1Q9Y3M2 126 aa3.21□□□□□ -1.9
CSDE1-207ENST00000483407 H0Y8G0 127 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 LEPROTO15243 131 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 HSBP1O75506 76 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 NDUFC2O95298 119 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 HERVK_113P61574 105 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 MT1HP80294 61 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 C10orf91Q5T1B1 145 aa3.2□□□□□ -1.9
CSDE1-207ENST00000483407 A0A1B0GWB2 263 aa3.19□□□□□ -1.9
CSDE1-207ENST00000483407 J3QQQ9 107 aa3.19□□□□□ -1.9
CSDE1-207ENST00000483407 ZNF73O43830 326 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-207ENST00000483407 LGALS3P17931 250 aaKnown RBP3.19□□□□□ -1.9
CSDE1-207ENST00000483407 PLNP26678 52 aa3.19□□□□□ -1.9
CSDE1-207ENST00000483407 NMUP48645 174 aa3.19□□□□□ -1.9
CSDE1-207ENST00000483407 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 SNAPINO95295 136 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 NDUFA5Q16718 116 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 HRCT1Q6UXD1 115 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 ST20-AS1Q8NBB2 130 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
CSDE1-207ENST00000483407 M0R2T5 61 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms