RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TRGV4A0A0C4DH28 118 aa5.21□□□□□ -1.58
COL4A5-205ENST00000483338 DEFB130BP0DP73 79 aa5.21□□□□□ -1.58
COL4A5-205ENST00000483338 DEFB130AP0DP74 79 aa5.21□□□□□ -1.58
COL4A5-205ENST00000483338 ELOF1P60002 83 aaKnown RBP5.21□□□□□ -1.58
COL4A5-205ENST00000483338 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
COL4A5-205ENST00000483338 NDUFB1O75438 58 aa5.2□□□□□ -1.58
COL4A5-205ENST00000483338 HTN3P15516 51 aa5.2□□□□□ -1.58
COL4A5-205ENST00000483338 C18orf65Q6ZTR6 163 aa5.2□□□□□ -1.58
COL4A5-205ENST00000483338 LINC00959A0A1B0GUT2 108 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 IGLV6-57P01721 117 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 TENM4Q6N022 2769 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 Q9BRP9 147 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 CCL24O00175 119 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 SMR3AQ99954 134 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 ZANQ9Y493 2812 aa5.19□□□□□ -1.58
COL4A5-205ENST00000483338 APCP25054 2843 aa5.18□□□□□ -1.58
COL4A5-205ENST00000483338 LOC100131303A0A0U1RQF7 123 aa5.18□□□□□ -1.58
COL4A5-205ENST00000483338 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
COL4A5-205ENST00000483338 H3BUA1 57 aa5.18□□□□□ -1.58
COL4A5-205ENST00000483338 COX17Q14061 63 aa5.18□□□□□ -1.58
COL4A5-205ENST00000483338 NOP10Q9NPE3 64 aaKnown RBP5.18□□□□□ -1.58
COL4A5-205ENST00000483338 NBPF19A0A087WUL8 3843 aa5.17□□□□□ -1.58
COL4A5-205ENST00000483338 KIAA0087Q14695 138 aa5.17□□□□□ -1.58
COL4A5-205ENST00000483338 NBEAL2Q6ZNJ1 2754 aa5.17□□□□□ -1.58
COL4A5-205ENST00000483338 INSP01308 110 aa5.17□□□□□ -1.58
COL4A5-205ENST00000483338 SERTAD4-AS1Q5TG53 156 aa5.17□□□□□ -1.58
COL4A5-205ENST00000483338 A6NDX4 124 aa5.16□□□□□ -1.58
COL4A5-205ENST00000483338 IGLV1-40P01703 118 aa5.16□□□□□ -1.58
COL4A5-205ENST00000483338 SETXQ7Z333 2677 aaKnown RBP5.16□□□□□ -1.58
COL4A5-205ENST00000483338 MAST4O15021 2626 aa5.16□□□□□ -1.58
COL4A5-205ENST00000483338 IGHV4-28A0A0C4DH34 117 aa5.16□□□□□ -1.58
COL4A5-205ENST00000483338 SPINK7P58062 85 aa5.15□□□□□ -1.58
COL4A5-205ENST00000483338 FSHBP01225 129 aa5.15□□□□□ -1.59
COL4A5-205ENST00000483338 VPREB1P12018 145 aa5.15□□□□□ -1.59
COL4A5-205ENST00000483338 SPANXA2-OT1Q8N9U9 137 aa5.15□□□□□ -1.59
COL4A5-205ENST00000483338 K7EQZ3 153 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 DSCR10P59022 87 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 KCNQ1DNQ9H478 68 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 OTOGQ6ZRI0 2925 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 VPS13CQ709C8 3753 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 IGLV10-54A0A075B6I4 117 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 WFDC10AQ9H1F0 79 aa5.14□□□□□ -1.59
COL4A5-205ENST00000483338 TEX15Q9BXT5 2789 aa5.13□□□□□ -1.59
COL4A5-205ENST00000483338 INAFM1C9JVW0 142 aa5.13□□□□□ -1.59
COL4A5-205ENST00000483338 ODF3L2Q3SX64 289 aa5.13□□□□□ -1.59
COL4A5-205ENST00000483338 DEFB4AO15263 64 aa5.13□□□□□ -1.59
COL4A5-205ENST00000483338 KRTAP1-3Q8IUG1 177 aa5.13□□□□□ -1.59
COL4A5-205ENST00000483338 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
COL4A5-205ENST00000483338 COA5Q86WW8 74 aa5.12□□□□□ -1.59
COL4A5-205ENST00000483338 PLAC8Q9NZF1 115 aa5.12□□□□□ -1.59
COL4A5-205ENST00000483338 MP68P56378 58 aa5.12□□□□□ -1.59
COL4A5-205ENST00000483338 DEFB116Q30KQ4 102 aa5.12□□□□□ -1.59
COL4A5-205ENST00000483338 Q8NAQ8 132 aa5.12□□□□□ -1.59
COL4A5-205ENST00000483338 AKAP9Q99996 3911 aa5.11□□□□□ -1.59
COL4A5-205ENST00000483338 CASC2Q6XLA1 102 aa5.11□□□□□ -1.59
COL4A5-205ENST00000483338 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
COL4A5-205ENST00000483338 FBN2P35556 2912 aa5.11□□□□□ -1.59
COL4A5-205ENST00000483338 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
COL4A5-205ENST00000483338 MAP6D1Q9H9H5 199 aa5.1□□□□□ -1.59
COL4A5-205ENST00000483338 ATRQ13535 2644 aa5.1□□□□□ -1.59
COL4A5-205ENST00000483338 NF1P21359 2839 aa5.1□□□□□ -1.59
COL4A5-205ENST00000483338 SPAG11AQ6PDA7 123 aa5.1□□□□□ -1.59
COL4A5-205ENST00000483338 A0A1W2PNM2 257 aa5.1□□□□□ -1.59
COL4A5-205ENST00000483338 KPRPQ5T749 579 aaPredicted RBP5.1□□□□□ -1.59
COL4A5-205ENST00000483338 SPAG11BQ08648 103 aa5.09□□□□□ -1.59
COL4A5-205ENST00000483338 UNQ6190/PRO20217Q6UXQ8 127 aa5.09□□□□□ -1.59
COL4A5-205ENST00000483338 CYSRT1A8MQ03 144 aa5.09□□□□□ -1.59
COL4A5-205ENST00000483338 LINC00528Q8N1L1 170 aa5.09□□□□□ -1.6
COL4A5-205ENST00000483338 HIVEP1P15822 2718 aa5.09□□□□□ -1.6
COL4A5-205ENST00000483338 C9orf163Q8N9P6 203 aa5.08□□□□□ -1.6
COL4A5-205ENST00000483338 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
COL4A5-205ENST00000483338 LINC00476Q8WZB0 136 aa5.07□□□□□ -1.6
COL4A5-205ENST00000483338 XAGE1AQ9HD64 81 aa5.07□□□□□ -1.6
COL4A5-205ENST00000483338 ANGP03950 147 aaKnown RBP5.06□□□□□ -1.6
COL4A5-205ENST00000483338 Q6YL49 198 aa5.06□□□□□ -1.6
COL4A5-205ENST00000483338 WFDC13Q8IUB5 93 aa5.06□□□□□ -1.6
COL4A5-205ENST00000483338 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
COL4A5-205ENST00000483338 H0Y9P7 68 aa5.06□□□□□ -1.6
COL4A5-205ENST00000483338 Q8N377 158 aa5.06□□□□□ -1.6
COL4A5-205ENST00000483338 DEFB105AQ8NG35 78 aa5.06□□□□□ -1.6
COL4A5-205ENST00000483338 IGKV2D-24A0A075B6R9 120 aa5.05□□□□□ -1.6
COL4A5-205ENST00000483338 GYPEP15421 78 aa5.05□□□□□ -1.6
COL4A5-205ENST00000483338 CHCHD10Q8WYQ3 142 aaPredicted RBP5.05□□□□□ -1.6
COL4A5-205ENST00000483338 A0A1B0GUV1 79 aa5.05□□□□□ -1.6
COL4A5-205ENST00000483338 A0A1B0GW54 56 aa5.05□□□□□ -1.6
COL4A5-205ENST00000483338 KRTAP1-1Q07627 177 aa5.05□□□□□ -1.6
COL4A5-205ENST00000483338 ZNF702PQ9H963 129 aa5.04□□□□□ -1.6
COL4A5-205ENST00000483338 A0A0J9YWU9 116 aa5.04□□□□□ -1.6
COL4A5-205ENST00000483338 WFDC10BQ8IUB3 73 aa5.04□□□□□ -1.6
COL4A5-205ENST00000483338 RETNLBQ9BQ08 111 aa5.04□□□□□ -1.6
COL4A5-205ENST00000483338 Q8NBF4 154 aa5.03□□□□□ -1.6
COL4A5-205ENST00000483338 IGLV7-46A0A075B6I9 117 aa5.03□□□□□ -1.6
COL4A5-205ENST00000483338 H3BPC8 53 aa5.03□□□□□ -1.6
COL4A5-205ENST00000483338 RTL8CO15255 209 aa5.03□□□□□ -1.6
COL4A5-205ENST00000483338 C1orf137Q5JT78 98 aa5.02□□□□□ -1.61
COL4A5-205ENST00000483338 SPRR4Q96PI1 79 aa5.02□□□□□ -1.61
COL4A5-205ENST00000483338 IGLV1-50A0A075B6I6 118 aa5.02□□□□□ -1.61
COL4A5-205ENST00000483338 ZNF706Q9Y5V0 76 aaPredicted RBP5.02□□□□□ -1.61
COL4A5-205ENST00000483338 PDZD2O15018 2839 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms