RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 CBY1Q9Y3M2 126 aa8.84□□□□□ -0.99
EXOSC3-205ENST00000482614 TRAV23DV6A0A075B6W5 121 aa8.83□□□□□ -1
EXOSC3-205ENST00000482614 JOSD1Q15040 202 aaPredicted RBP8.83□□□□□ -1
EXOSC3-205ENST00000482614 GAGE2AQ6NT46 116 aa8.83□□□□□ -1
EXOSC3-205ENST00000482614 ZNF815PA8K554 130 aa8.82□□□□□ -1
EXOSC3-205ENST00000482614 ERC2-IT1O76042 136 aa8.82□□□□□ -1
EXOSC3-205ENST00000482614 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
EXOSC3-205ENST00000482614 LITAFQ99732 161 aa8.82□□□□□ -1
EXOSC3-205ENST00000482614 Q9BRP9 147 aa8.82□□□□□ -1
EXOSC3-205ENST00000482614 KRTDAPP60985 99 aa8.81□□□□□ -1
EXOSC3-205ENST00000482614 Q8NBF4 154 aa8.81□□□□□ -1
EXOSC3-205ENST00000482614 SPANXCQ9NY87 97 aa8.81□□□□□ -1
EXOSC3-205ENST00000482614 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
EXOSC3-205ENST00000482614 ZNF73O43830 326 aaPredicted RBP8.8□□□□□ -1
EXOSC3-205ENST00000482614 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
EXOSC3-205ENST00000482614 C20orf202A1L168 122 aa8.79□□□□□ -1
EXOSC3-205ENST00000482614 TPRXLQ17RH7 258 aa8.79□□□□□ -1
EXOSC3-205ENST00000482614 SPINK1P00995 79 aa8.78□□□□□ -1
EXOSC3-205ENST00000482614 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
EXOSC3-205ENST00000482614 OR13C6PQ8NH95 151 aa8.78□□□□□ -1
EXOSC3-205ENST00000482614 TTTY13Q9BZ97 58 aa8.78□□□□□ -1
EXOSC3-205ENST00000482614 IGLV9-49A0A0B4J1Y8 123 aa8.76□□□□□ -1.01
EXOSC3-205ENST00000482614 C5orf52A6NGY3 159 aa8.76□□□□□ -1.01
EXOSC3-205ENST00000482614 MOBPQ13875 183 aa8.76□□□□□ -1.01
EXOSC3-205ENST00000482614 LINC00518Q8N0U6 118 aa8.76□□□□□ -1.01
EXOSC3-205ENST00000482614 CDIP1Q9H305 208 aa8.76□□□□□ -1.01
EXOSC3-205ENST00000482614 AKR1D1P51857 326 aa8.75□□□□□ -1.01
EXOSC3-205ENST00000482614 FP248Q71RG6 208 aaPredicted RBP8.75□□□□□ -1.01
EXOSC3-205ENST00000482614 SPANXDQ9BXN6 97 aa8.75□□□□□ -1.01
EXOSC3-205ENST00000482614 SCGB1D4Q6XE38 83 aa8.74□□□□□ -1.01
EXOSC3-205ENST00000482614 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
EXOSC3-205ENST00000482614 ANKRD39Q53RE8 183 aa8.73□□□□□ -1.01
EXOSC3-205ENST00000482614 COPS9Q8WXC6 57 aa8.72□□□□□ -1.01
EXOSC3-205ENST00000482614 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
EXOSC3-205ENST00000482614 ATOH7Q8N100 152 aa8.71□□□□□ -1.02
EXOSC3-205ENST00000482614 ST20-AS1Q8NBB2 130 aa8.71□□□□□ -1.02
EXOSC3-205ENST00000482614 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
EXOSC3-205ENST00000482614 IFITM1P13164 125 aa8.7□□□□□ -1.02
EXOSC3-205ENST00000482614 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
EXOSC3-205ENST00000482614 Q6ZVH6 145 aa8.7□□□□□ -1.02
EXOSC3-205ENST00000482614 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
EXOSC3-205ENST00000482614 MUC2Q02817 5179 aa8.69□□□□□ -1.02
EXOSC3-205ENST00000482614 COX7BP24311 80 aa8.68□□□□□ -1.02
EXOSC3-205ENST00000482614 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
EXOSC3-205ENST00000482614 SNRPEP62304 92 aaKnown RBP8.68□□□□□ -1.02
EXOSC3-205ENST00000482614 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
EXOSC3-205ENST00000482614 SPRR1BP22528 89 aa8.67□□□□□ -1.02
EXOSC3-205ENST00000482614 SLC25A34Q6PIV7 304 aa8.67□□□□□ -1.02
EXOSC3-205ENST00000482614 PCP2Q8IVA1 136 aa8.67□□□□□ -1.02
EXOSC3-205ENST00000482614 SLC25A20O43772 301 aa8.66□□□□□ -1.02
EXOSC3-205ENST00000482614 Q8N377 158 aa8.66□□□□□ -1.02
EXOSC3-205ENST00000482614 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
EXOSC3-205ENST00000482614 S100A1P23297 94 aa8.65□□□□□ -1.02
EXOSC3-205ENST00000482614 S100A2P29034 98 aa8.65□□□□□ -1.02
EXOSC3-205ENST00000482614 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.02
EXOSC3-205ENST00000482614 HIST3H2BBQ8N257 126 aa8.65□□□□□ -1.02
EXOSC3-205ENST00000482614 A6NDN8 102 aa8.64□□□□□ -1.03
EXOSC3-205ENST00000482614 KRTAP13-3Q3SY46 172 aa8.64□□□□□ -1.03
EXOSC3-205ENST00000482614 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
EXOSC3-205ENST00000482614 HIST1H2BLQ99880 126 aa8.63□□□□□ -1.03
EXOSC3-205ENST00000482614 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
EXOSC3-205ENST00000482614 TAL2Q16559 108 aa8.62□□□□□ -1.03
EXOSC3-205ENST00000482614 TRAV13-2A0A0B4J235 113 aa8.6□□□□□ -1.03
EXOSC3-205ENST00000482614 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
EXOSC3-205ENST00000482614 S100A6P06703 90 aa8.6□□□□□ -1.03
EXOSC3-205ENST00000482614 TEX49A0A1B0GTD5 131 aa8.59□□□□□ -1.03
EXOSC3-205ENST00000482614 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
EXOSC3-205ENST00000482614 A4D1N5 150 aa8.58□□□□□ -1.04
EXOSC3-205ENST00000482614 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
EXOSC3-205ENST00000482614 Q1RN00 199 aa8.56□□□□□ -1.04
EXOSC3-205ENST00000482614 SMIM11BQ8TCY0 68 aa8.56□□□□□ -1.04
EXOSC3-205ENST00000482614 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
EXOSC3-205ENST00000482614 PRO1933Q9H354 126 aa8.55□□□□□ -1.04
EXOSC3-205ENST00000482614 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
EXOSC3-205ENST00000482614 IGLV5-48A0A075B6I7 105 aa8.54□□□□□ -1.04
EXOSC3-205ENST00000482614 CD164Q04900 197 aa8.54□□□□□ -1.04
EXOSC3-205ENST00000482614 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
EXOSC3-205ENST00000482614 LINC01547P58512 204 aaPredicted RBP8.53□□□□□ -1.04
EXOSC3-205ENST00000482614 SMIM29Q86T20 159 aa8.53□□□□□ -1.04
EXOSC3-205ENST00000482614 FAT4Q6V0I7 4981 aa8.53□□□□□ -1.04
EXOSC3-205ENST00000482614 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
EXOSC3-205ENST00000482614 VAMP3Q15836 100 aa8.52□□□□□ -1.05
EXOSC3-205ENST00000482614 SCGB1D1O95968 90 aa8.51□□□□□ -1.05
EXOSC3-205ENST00000482614 H7C2G1 150 aa8.5□□□□□ -1.05
EXOSC3-205ENST00000482614 XP32Q5T750 250 aa8.48□□□□□ -1.05
EXOSC3-205ENST00000482614 LCE2AQ5TA79 106 aaPredicted RBP8.47□□□□□ -1.05
EXOSC3-205ENST00000482614 LINC00575Q6W349 94 aa8.47□□□□□ -1.05
EXOSC3-205ENST00000482614 COX8AP10176 69 aa8.46□□□□□ -1.06
EXOSC3-205ENST00000482614 Q5XG85 94 aa8.46□□□□□ -1.06
EXOSC3-205ENST00000482614 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
EXOSC3-205ENST00000482614 hADV29S1A0JD25 119 aa8.44□□□□□ -1.06
EXOSC3-205ENST00000482614 F8WEM9 126 aa8.43□□□□□ -1.06
EXOSC3-205ENST00000482614 DLEU1O43261 78 aa8.43□□□□□ -1.06
EXOSC3-205ENST00000482614 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
EXOSC3-205ENST00000482614 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
EXOSC3-205ENST00000482614 Q6ZQY7 126 aa8.41□□□□□ -1.06
EXOSC3-205ENST00000482614 C12orf57Q99622 126 aa8.41□□□□□ -1.06
EXOSC3-205ENST00000482614 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
EXOSC3-205ENST00000482614 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
EXOSC3-205ENST00000482614 C1orf195Q5TG92 126 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms