RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
CCDC78-211ENST00000481804 IGKV2D-24A0A075B6R9 120 aa9.5□□□□□ -0.89
CCDC78-211ENST00000481804 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
CCDC78-211ENST00000481804 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
CCDC78-211ENST00000481804 ATP5EP56381 51 aaPredicted RBP9.48□□□□□ -0.89
CCDC78-211ENST00000481804 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
CCDC78-211ENST00000481804 IGKV4-1P06312 121 aa9.47□□□□□ -0.89
CCDC78-211ENST00000481804 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
CCDC78-211ENST00000481804 Q6ZRP5 223 aa9.46□□□□□ -0.89
CCDC78-211ENST00000481804 F8P00451 2351 aa9.46□□□□□ -0.9
CCDC78-211ENST00000481804 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC78-211ENST00000481804 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
CCDC78-211ENST00000481804 C15orf56Q8N910 161 aa9.46□□□□□ -0.9
CCDC78-211ENST00000481804 PRYO14603 147 aa9.45□□□□□ -0.9
CCDC78-211ENST00000481804 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
CCDC78-211ENST00000481804 INAFM1C9JVW0 142 aa9.45□□□□□ -0.9
CCDC78-211ENST00000481804 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
CCDC78-211ENST00000481804 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
CCDC78-211ENST00000481804 MPLKIPQ8TAP9 179 aa9.44□□□□□ -0.9
CCDC78-211ENST00000481804 RETNQ9HD89 108 aa9.43□□□□□ -0.9
CCDC78-211ENST00000481804 PRO0628Q9UI54 55 aa9.43□□□□□ -0.9
CCDC78-211ENST00000481804 HIGD2AQ9BW72 106 aa9.43□□□□□ -0.9
CCDC78-211ENST00000481804 RPL37AP8A6NKH3 93 aa9.42□□□□□ -0.9
CCDC78-211ENST00000481804 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
CCDC78-211ENST00000481804 Q6ZTC4 211 aa9.42□□□□□ -0.9
CCDC78-211ENST00000481804 FAM30AQ9NZY2 134 aa9.42□□□□□ -0.9
CCDC78-211ENST00000481804 MAST4O15021 2626 aa9.42□□□□□ -0.9
CCDC78-211ENST00000481804 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
CCDC78-211ENST00000481804 C7orf33Q8WU49 177 aa9.41□□□□□ -0.9
CCDC78-211ENST00000481804 OCR1Q9BZK8 76 aa9.41□□□□□ -0.9
CCDC78-211ENST00000481804 Q8N377 158 aa9.41□□□□□ -0.9
CCDC78-211ENST00000481804 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
CCDC78-211ENST00000481804 PKD1L1Q8TDX9 2849 aa9.4□□□□□ -0.9
CCDC78-211ENST00000481804 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.91
CCDC78-211ENST00000481804 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
CCDC78-211ENST00000481804 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
CCDC78-211ENST00000481804 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
CCDC78-211ENST00000481804 ESRGQ1W209 222 aa9.39□□□□□ -0.91
CCDC78-211ENST00000481804 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
CCDC78-211ENST00000481804 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
CCDC78-211ENST00000481804 KCNQ1DNQ9H478 68 aa9.38□□□□□ -0.91
CCDC78-211ENST00000481804 C1orf137Q5JT78 98 aa9.37□□□□□ -0.91
CCDC78-211ENST00000481804 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
CCDC78-211ENST00000481804 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
CCDC78-211ENST00000481804 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
CCDC78-211ENST00000481804 IGLV5-48A0A075B6I7 105 aa9.34□□□□□ -0.91
CCDC78-211ENST00000481804 ST20-AS1Q8NBB2 130 aa9.34□□□□□ -0.91
CCDC78-211ENST00000481804 UBE2BP63146 152 aa9.34□□□□□ -0.91
CCDC78-211ENST00000481804 Q6ZRX8 168 aa9.34□□□□□ -0.91
CCDC78-211ENST00000481804 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
CCDC78-211ENST00000481804 H3BNG1 76 aa9.33□□□□□ -0.92
CCDC78-211ENST00000481804 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
CCDC78-211ENST00000481804 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
CCDC78-211ENST00000481804 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
CCDC78-211ENST00000481804 LINC01556Q5JQF7 62 aa9.32□□□□□ -0.92
CCDC78-211ENST00000481804 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
CCDC78-211ENST00000481804 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
CCDC78-211ENST00000481804 Q8NBF4 154 aa9.3□□□□□ -0.92
CCDC78-211ENST00000481804 Q9BRP9 147 aa9.3□□□□□ -0.92
CCDC78-211ENST00000481804 F8WDY8 70 aa9.3□□□□□ -0.92
CCDC78-211ENST00000481804 TENM3Q9P273 2699 aa9.3□□□□□ -0.92
CCDC78-211ENST00000481804 COL6A5A8TX70 2615 aa9.27□□□□□ -0.92
CCDC78-211ENST00000481804 K7EQZ3 153 aa9.27□□□□□ -0.93
CCDC78-211ENST00000481804 C11orf45Q8TAV5 145 aa9.27□□□□□ -0.93
CCDC78-211ENST00000481804 A0A1B0GW54 56 aa9.27□□□□□ -0.93
CCDC78-211ENST00000481804 MGAM2Q2M2H8 2515 aa9.26□□□□□ -0.93
CCDC78-211ENST00000481804 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
CCDC78-211ENST00000481804 PRR4Q16378 134 aa9.26□□□□□ -0.93
CCDC78-211ENST00000481804 BAHCC1Q9P281 2608 aa9.26□□□□□ -0.93
CCDC78-211ENST00000481804 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
CCDC78-211ENST00000481804 DEFB116Q30KQ4 102 aa9.24□□□□□ -0.93
CCDC78-211ENST00000481804 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
CCDC78-211ENST00000481804 DSCR10P59022 87 aa9.24□□□□□ -0.93
CCDC78-211ENST00000481804 A0A0G2JQZ4 141 aa9.23□□□□□ -0.93
CCDC78-211ENST00000481804 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
CCDC78-211ENST00000481804 ANK2Q01484 3957 aa9.22□□□□□ -0.93
CCDC78-211ENST00000481804 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
CCDC78-211ENST00000481804 TNP2Q05952 138 aa9.22□□□□□ -0.93
CCDC78-211ENST00000481804 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
CCDC78-211ENST00000481804 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
CCDC78-211ENST00000481804 HCG22E2RYF7 251 aa9.21□□□□□ -0.93
CCDC78-211ENST00000481804 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.93
CCDC78-211ENST00000481804 SPRR4Q96PI1 79 aa9.21□□□□□ -0.94
CCDC78-211ENST00000481804 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.94
CCDC78-211ENST00000481804 LINC00476Q8WZB0 136 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 PSCAO43653 123 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 DNAH10OSP0CZ25 163 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 C1orf64Q8NEQ6 169 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 SPRR1AP35321 89 aa9.2□□□□□ -0.94
CCDC78-211ENST00000481804 REG3GQ6UW15 175 aa9.19□□□□□ -0.94
CCDC78-211ENST00000481804 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
CCDC78-211ENST00000481804 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
CCDC78-211ENST00000481804 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
CCDC78-211ENST00000481804 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
CCDC78-211ENST00000481804 A0A087WSZ3 146 aa9.16□□□□□ -0.94
CCDC78-211ENST00000481804 MP68P56378 58 aa9.16□□□□□ -0.94
CCDC78-211ENST00000481804 PRLHP81277 87 aa9.16□□□□□ -0.94
CCDC78-211ENST00000481804 KRTAP7-1Q8IUC3 87 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms