RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ADAMTSL4-AS1Q5T5F5 129 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 Q8NBF4 154 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 LITAFQ99732 161 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 SPRR1AP35321 89 aa8.71□□□□□ -1.02
LIMS3-203ENST00000480744 S100A12P80511 92 aa8.71□□□□□ -1.02
LIMS3-203ENST00000480744 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.02
LIMS3-203ENST00000480744 SOSTDC1Q6X4U4 206 aa8.7□□□□□ -1.02
LIMS3-203ENST00000480744 LOC107984156A0A0G2JMH3 177 aa8.69□□□□□ -1.02
LIMS3-203ENST00000480744 ZNF815PA8K554 130 aa8.69□□□□□ -1.02
LIMS3-203ENST00000480744 ARL17AQ8IVW1 177 aa8.69□□□□□ -1.02
LIMS3-203ENST00000480744 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
LIMS3-203ENST00000480744 NPC2P61916 151 aa8.68□□□□□ -1.02
LIMS3-203ENST00000480744 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
LIMS3-203ENST00000480744 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
LIMS3-203ENST00000480744 DDTP30046 118 aa8.66□□□□□ -1.02
LIMS3-203ENST00000480744 PCP2Q8IVA1 136 aa8.66□□□□□ -1.02
LIMS3-203ENST00000480744 IGLV9-49A0A0B4J1Y8 123 aa8.65□□□□□ -1.02
LIMS3-203ENST00000480744 B5MCH6 92 aa8.65□□□□□ -1.02
LIMS3-203ENST00000480744 MIEN1Q9BRT3 115 aa8.65□□□□□ -1.02
LIMS3-203ENST00000480744 TIMM17BO60830 172 aa8.64□□□□□ -1.03
LIMS3-203ENST00000480744 ERC2-IT1O76042 136 aa8.64□□□□□ -1.03
LIMS3-203ENST00000480744 MOBPQ13875 183 aa8.64□□□□□ -1.03
LIMS3-203ENST00000480744 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
LIMS3-203ENST00000480744 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
LIMS3-203ENST00000480744 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
LIMS3-203ENST00000480744 SPINK1P00995 79 aa8.63□□□□□ -1.03
LIMS3-203ENST00000480744 AKR1D1P51857 326 aa8.63□□□□□ -1.03
LIMS3-203ENST00000480744 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
LIMS3-203ENST00000480744 S100A7L2Q5SY68 101 aa8.62□□□□□ -1.03
LIMS3-203ENST00000480744 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
LIMS3-203ENST00000480744 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
LIMS3-203ENST00000480744 KRTAP13-3Q3SY46 172 aa8.61□□□□□ -1.03
LIMS3-203ENST00000480744 Q9BRP9 147 aa8.61□□□□□ -1.03
LIMS3-203ENST00000480744 NDUFC2O95298 119 aa8.6□□□□□ -1.03
LIMS3-203ENST00000480744 SCGB1D1O95968 90 aa8.6□□□□□ -1.03
LIMS3-203ENST00000480744 Q6ZRX8 168 aa8.6□□□□□ -1.03
LIMS3-203ENST00000480744 TMA7Q9Y2S6 64 aaKnown RBP8.6□□□□□ -1.03
LIMS3-203ENST00000480744 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
LIMS3-203ENST00000480744 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
LIMS3-203ENST00000480744 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
LIMS3-203ENST00000480744 TRAV23DV6A0A075B6W5 121 aa8.58□□□□□ -1.04
LIMS3-203ENST00000480744 SSBP3-AS1Q7Z2R9 100 aa8.58□□□□□ -1.04
LIMS3-203ENST00000480744 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
LIMS3-203ENST00000480744 JOSD1Q15040 202 aaPredicted RBP8.57□□□□□ -1.04
LIMS3-203ENST00000480744 C9orf153Q5TBE3 101 aa8.57□□□□□ -1.04
LIMS3-203ENST00000480744 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
LIMS3-203ENST00000480744 Q8N377 158 aa8.55□□□□□ -1.04
LIMS3-203ENST00000480744 ZNF73O43830 326 aaPredicted RBP8.54□□□□□ -1.04
LIMS3-203ENST00000480744 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
LIMS3-203ENST00000480744 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
LIMS3-203ENST00000480744 SLC25A20O43772 301 aa8.53□□□□□ -1.04
LIMS3-203ENST00000480744 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
LIMS3-203ENST00000480744 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
LIMS3-203ENST00000480744 MUSTN1Q8IVN3 82 aa8.52□□□□□ -1.05
LIMS3-203ENST00000480744 COX8AP10176 69 aa8.51□□□□□ -1.05
LIMS3-203ENST00000480744 HINT1P49773 126 aaPredicted RBP8.51□□□□□ -1.05
LIMS3-203ENST00000480744 PAM16Q9Y3D7 125 aa8.51□□□□□ -1.05
LIMS3-203ENST00000480744 IFITM1P13164 125 aa8.5□□□□□ -1.05
LIMS3-203ENST00000480744 Q6ZVH6 145 aa8.5□□□□□ -1.05
LIMS3-203ENST00000480744 OR13C6PQ8NH95 151 aa8.5□□□□□ -1.05
LIMS3-203ENST00000480744 SPATA45Q537H7 98 aa8.49□□□□□ -1.05
LIMS3-203ENST00000480744 PYY3Q5JQD4 70 aa8.49□□□□□ -1.05
LIMS3-203ENST00000480744 CBY1Q9Y3M2 126 aa8.49□□□□□ -1.05
LIMS3-203ENST00000480744 C14orf144Q96I85 54 aa8.48□□□□□ -1.05
LIMS3-203ENST00000480744 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
LIMS3-203ENST00000480744 VAMP8Q9BV40 100 aa8.47□□□□□ -1.05
LIMS3-203ENST00000480744 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.06
LIMS3-203ENST00000480744 DLEU1O43261 78 aa8.45□□□□□ -1.06
LIMS3-203ENST00000480744 HRCT1Q6UXD1 115 aa8.45□□□□□ -1.06
LIMS3-203ENST00000480744 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
LIMS3-203ENST00000480744 COPS9Q8WXC6 57 aa8.45□□□□□ -1.06
LIMS3-203ENST00000480744 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
LIMS3-203ENST00000480744 XP32Q5T750 250 aa8.43□□□□□ -1.06
LIMS3-203ENST00000480744 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
LIMS3-203ENST00000480744 DHRS4-AS1Q9P1J3 65 aa8.43□□□□□ -1.06
LIMS3-203ENST00000480744 A4D1N5 150 aa8.42□□□□□ -1.06
LIMS3-203ENST00000480744 SPRR1BP22528 89 aa8.42□□□□□ -1.06
LIMS3-203ENST00000480744 LAMTOR3Q9UHA4 124 aa8.42□□□□□ -1.06
LIMS3-203ENST00000480744 A6NDN8 102 aa8.41□□□□□ -1.06
LIMS3-203ENST00000480744 COX7BP24311 80 aa8.41□□□□□ -1.06
LIMS3-203ENST00000480744 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
LIMS3-203ENST00000480744 LIMD2Q9BT23 127 aa8.41□□□□□ -1.06
LIMS3-203ENST00000480744 HIST1H4GQ99525 98 aa8.4□□□□□ -1.06
LIMS3-203ENST00000480744 ELOF1P60002 83 aaKnown RBP8.39□□□□□ -1.07
LIMS3-203ENST00000480744 DEFB105AQ8NG35 78 aa8.39□□□□□ -1.07
LIMS3-203ENST00000480744 C12orf57Q99622 126 aa8.39□□□□□ -1.07
LIMS3-203ENST00000480744 HIGD1BQ9P298 99 aa8.39□□□□□ -1.07
LIMS3-203ENST00000480744 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
LIMS3-203ENST00000480744 TAL2Q16559 108 aa8.38□□□□□ -1.07
LIMS3-203ENST00000480744 Q1RN00 199 aa8.38□□□□□ -1.07
LIMS3-203ENST00000480744 SMIM11BQ8TCY0 68 aa8.38□□□□□ -1.07
LIMS3-203ENST00000480744 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
LIMS3-203ENST00000480744 C9orf92A6NGG3 77 aa8.37□□□□□ -1.07
LIMS3-203ENST00000480744 TRBV7-6A0A0J9YX20 115 aa8.33□□□□□ -1.08
LIMS3-203ENST00000480744 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
LIMS3-203ENST00000480744 H7C2G1 150 aa8.33□□□□□ -1.08
LIMS3-203ENST00000480744 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
LIMS3-203ENST00000480744 PRO1933Q9H354 126 aa8.33□□□□□ -1.08
LIMS3-203ENST00000480744 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms