RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
LIMS4-202ENST00000480598 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
LIMS4-202ENST00000480598 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
LIMS4-202ENST00000480598 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
LIMS4-202ENST00000480598 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
LIMS4-202ENST00000480598 LITAFQ99732 161 aa8.49□□□□□ -1.05
LIMS4-202ENST00000480598 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
LIMS4-202ENST00000480598 IGLV9-49A0A0B4J1Y8 123 aa8.48□□□□□ -1.05
LIMS4-202ENST00000480598 MOBPQ13875 183 aa8.48□□□□□ -1.05
LIMS4-202ENST00000480598 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
LIMS4-202ENST00000480598 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
LIMS4-202ENST00000480598 TTTY13Q9BZ97 58 aa8.47□□□□□ -1.05
LIMS4-202ENST00000480598 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
LIMS4-202ENST00000480598 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
LIMS4-202ENST00000480598 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
LIMS4-202ENST00000480598 TIMM17BO60830 172 aa8.44□□□□□ -1.06
LIMS4-202ENST00000480598 SPINK1P00995 79 aa8.44□□□□□ -1.06
LIMS4-202ENST00000480598 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
LIMS4-202ENST00000480598 SPANXCQ9NY87 97 aa8.44□□□□□ -1.06
LIMS4-202ENST00000480598 KRTDAPP60985 99 aa8.43□□□□□ -1.06
LIMS4-202ENST00000480598 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
LIMS4-202ENST00000480598 FP248Q71RG6 208 aaPredicted RBP8.43□□□□□ -1.06
LIMS4-202ENST00000480598 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
LIMS4-202ENST00000480598 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
LIMS4-202ENST00000480598 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
LIMS4-202ENST00000480598 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
LIMS4-202ENST00000480598 HINT1P49773 126 aaPredicted RBP8.4□□□□□ -1.06
LIMS4-202ENST00000480598 C9orf153Q5TBE3 101 aa8.4□□□□□ -1.06
LIMS4-202ENST00000480598 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
LIMS4-202ENST00000480598 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
LIMS4-202ENST00000480598 CBY1Q9Y3M2 126 aa8.39□□□□□ -1.07
LIMS4-202ENST00000480598 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
LIMS4-202ENST00000480598 ATOH7Q8N100 152 aa8.38□□□□□ -1.07
LIMS4-202ENST00000480598 Q8N377 158 aa8.38□□□□□ -1.07
LIMS4-202ENST00000480598 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
LIMS4-202ENST00000480598 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
LIMS4-202ENST00000480598 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
LIMS4-202ENST00000480598 C20orf202A1L168 122 aa8.36□□□□□ -1.07
LIMS4-202ENST00000480598 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
LIMS4-202ENST00000480598 C6orf99Q4VX62 202 aa8.35□□□□□ -1.07
LIMS4-202ENST00000480598 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
LIMS4-202ENST00000480598 COX7BP24311 80 aa8.34□□□□□ -1.07
LIMS4-202ENST00000480598 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
LIMS4-202ENST00000480598 SLC25A20O43772 301 aa8.33□□□□□ -1.08
LIMS4-202ENST00000480598 SPRR1BP22528 89 aa8.33□□□□□ -1.08
LIMS4-202ENST00000480598 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
LIMS4-202ENST00000480598 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
LIMS4-202ENST00000480598 IFITM1P13164 125 aa8.29□□□□□ -1.08
LIMS4-202ENST00000480598 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
LIMS4-202ENST00000480598 SLC25A34Q6PIV7 304 aa8.29□□□□□ -1.08
LIMS4-202ENST00000480598 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
LIMS4-202ENST00000480598 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
LIMS4-202ENST00000480598 DEFB105AQ8NG35 78 aa8.29□□□□□ -1.08
LIMS4-202ENST00000480598 LAMTOR3Q9UHA4 124 aa8.29□□□□□ -1.08
LIMS4-202ENST00000480598 A6NDN8 102 aa8.28□□□□□ -1.08
LIMS4-202ENST00000480598 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
LIMS4-202ENST00000480598 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
LIMS4-202ENST00000480598 TAL2Q16559 108 aa8.27□□□□□ -1.09
LIMS4-202ENST00000480598 Q1RN00 199 aa8.27□□□□□ -1.09
LIMS4-202ENST00000480598 Q6ZVH6 145 aa8.27□□□□□ -1.09
LIMS4-202ENST00000480598 TRBV7-6A0A0J9YX20 115 aa8.26□□□□□ -1.09
LIMS4-202ENST00000480598 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
LIMS4-202ENST00000480598 A0A1B0GWB2 263 aa8.25□□□□□ -1.09
LIMS4-202ENST00000480598 AKR1D1P51857 326 aa8.25□□□□□ -1.09
LIMS4-202ENST00000480598 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
LIMS4-202ENST00000480598 HIST1H2BLQ99880 126 aa8.24□□□□□ -1.09
LIMS4-202ENST00000480598 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
LIMS4-202ENST00000480598 LINC01547P58512 204 aaPredicted RBP8.23□□□□□ -1.09
LIMS4-202ENST00000480598 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
LIMS4-202ENST00000480598 SNRPEP62304 92 aaKnown RBP8.23□□□□□ -1.09
LIMS4-202ENST00000480598 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
LIMS4-202ENST00000480598 S100A2P29034 98 aa8.22□□□□□ -1.09
LIMS4-202ENST00000480598 XP32Q5T750 250 aa8.22□□□□□ -1.09
LIMS4-202ENST00000480598 SMIM29Q86T20 159 aa8.22□□□□□ -1.09
LIMS4-202ENST00000480598 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
LIMS4-202ENST00000480598 TRAV13-2A0A0B4J235 113 aa8.21□□□□□ -1.1
LIMS4-202ENST00000480598 PRO1933Q9H354 126 aa8.21□□□□□ -1.1
LIMS4-202ENST00000480598 IGLV5-48A0A075B6I7 105 aa8.2□□□□□ -1.1
LIMS4-202ENST00000480598 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
LIMS4-202ENST00000480598 H7C2G1 150 aa8.19□□□□□ -1.1
LIMS4-202ENST00000480598 A4D1N5 150 aa8.18□□□□□ -1.1
LIMS4-202ENST00000480598 HSBP1L1C9JCN9 74 aa8.18□□□□□ -1.1
LIMS4-202ENST00000480598 CD164Q04900 197 aa8.18□□□□□ -1.1
LIMS4-202ENST00000480598 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
LIMS4-202ENST00000480598 S100A6P06703 90 aa8.16□□□□□ -1.1
LIMS4-202ENST00000480598 S100A1P23297 94 aa8.16□□□□□ -1.1
LIMS4-202ENST00000480598 NHP2Q9NX24 153 aaKnown RBP8.16□□□□□ -1.1
LIMS4-202ENST00000480598 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
LIMS4-202ENST00000480598 VAMP3Q15836 100 aa8.12□□□□□ -1.11
LIMS4-202ENST00000480598 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
LIMS4-202ENST00000480598 SCGB1D1O95968 90 aa8.11□□□□□ -1.11
LIMS4-202ENST00000480598 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
LIMS4-202ENST00000480598 Q5XG85 94 aa8.11□□□□□ -1.11
LIMS4-202ENST00000480598 C12orf57Q99622 126 aa8.11□□□□□ -1.11
LIMS4-202ENST00000480598 PCOTHQ58A44 107 aa8.09□□□□□ -1.11
LIMS4-202ENST00000480598 Q6ZQY7 126 aa8.09□□□□□ -1.11
LIMS4-202ENST00000480598 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
LIMS4-202ENST00000480598 HIST1H4GQ99525 98 aa8.08□□□□□ -1.12
LIMS4-202ENST00000480598 F8WEM9 126 aa8.07□□□□□ -1.12
LIMS4-202ENST00000480598 COX8AP10176 69 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms